Nipponia nippon (crested ibis): 104017909
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Entry
104017909 CDS
T05756
Symbol
THBS2
Name
(RefSeq) thrombospondin-2
KO
K04659
thrombospondin 2/3/4/5
Organism
nni
Nipponia nippon (crested ibis)
Pathway
nni04145
Phagosome
nni04510
Focal adhesion
nni04512
ECM-receptor interaction
nni04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
nni00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
104017909 (THBS2)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
104017909 (THBS2)
09144 Cellular community - eukaryotes
04510 Focal adhesion
104017909 (THBS2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
104017909 (THBS2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nni04131
]
104017909 (THBS2)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nni04147
]
104017909 (THBS2)
00536 Glycosaminoglycan binding proteins [BR:
nni00536
]
104017909 (THBS2)
Membrane trafficking [BR:
nni04131
]
Endocytosis
Phagocytosis
Opsonins
104017909 (THBS2)
Exosome [BR:
nni04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
104017909 (THBS2)
Exosomal proteins of colorectal cancer cells
104017909 (THBS2)
Exosomal proteins of bladder cancer cells
104017909 (THBS2)
Glycosaminoglycan binding proteins [BR:
nni00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
104017909 (THBS2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TSP_C
TSP_3
TSP_1
TSP1_spondin
VWC
TSP1_CCN
TSP1_CFP_C
EGF_3
TSP1_ADAMTS
Laminin_G_3
EGF
cEGF
Laminin_G_2
Motif
Other DBs
NCBI-GeneID:
104017909
NCBI-ProteinID:
XP_009469265
LinkDB
All DBs
Position
Unknown
AA seq
1178 aa
AA seq
DB search
MLQRSGLLWLAVLITLWVSSDAQDGDKEEETTFDLLQISNINRKTVGAKSFRGPDPTIPA
YRFIRFDHIPPCKPEKLKKIVKLIRQNEGFILSATLRQDRQSRGTILALEGPGISERQFE
IISNGRANTLDLIYWVDGFQNVISLEDVDLADSQWKNLTVQITGENYNLYVGCDLIDSFI
LEEPFYEQLKAENSRMYVAKGSIRENHFRGLLQNIQLIFDTSIEDVLRKKGCQRSQSTEV
NTINESTEILHLSPAVTTEYVGEKPEKKAEFCDRSCEELGTMFTELTGLRIVVNNLADNL
QKVSEENQIMWELIGPNKTLKNQSVCWQDGRVFADNESWIVDSCTKCTCQDSKIVCHQIT
CPAVSCADPSFVEGECCPVCSHSDDSEEGWSPWSDWTKCSVTCGSGTQMRGRSCDVTRSA
CTGPHIQTRMCSFKKCDHRIRQDGGWSHWSPWSSCSVTCGVGNITRIRLCNSPIPQMGGK
NCVGNGRETEKCEKVPCPVNGQWGPWSPWSACTVTCGGGIRERSRLCNSPEPQYGGKPCV
GDTKQHDMCNKKDCPIDGCLSNPCFPGAECNSYPDGSWSCGPCPAGYLGNGTVCEDLDEC
IAVSDVCFKVNQVHRCVNTNPGFHCLPCPPRYKGSQPYGVGLEVAKAEKQVCEPENPCKD
KTHSCHKSAECIYLGHFSDPMYKCECRTGYAGDGRICGEDSDLDGWPNNNLVCAANATYH
CVKDNCPLLPNSGQEDFDKDGKGDACDEDDDNDGVEDDKDNCPLLFNPRQFDYDKDEVGD
RCDNCPYVHNPAQIDTDNNGEGDSCAVDIDGDDIFNERDNCPYVYNTDQSDTDGDGVGDQ
CDNCPLMHNPDQTDADNDLVGDQCDNNEDIDEDGHQNNQDNCPYIPNANQADHDKDGKGD
ACDSDDDNDGVPDDRDNCRLRYNPEQEDSDGDGRGDICKDDFDNDNVPDIYDVCPENNAI
SETDFRKFQMVPLDPKGTAQIDPNWVIRHQGKELVQTANSDPGIAVGYDEFSSVDFSGTF
YVNTDRDDDYAGFVFGYQSSSRFYVLMWKQVTQTYWEDKPTRAYGYSGVSLKVVNSTTGT
GEHLRNALWHTGNTPGQVRTLWHDPKNIGWKDYTAYRWHLIHRPKTGLIKVLVYEGKQVM
VDSGPIYDTTFAGGRLGLFVFSQEMVYFSDLKYECRDA
NT seq
3537 nt
NT seq
+upstream
nt +downstream
nt
atgctgcagaggagtgggctgttgtggcttgctgtgttgataaccctgtgggtttcctca
gatgctcaggatggtgacaaggaagaggagactacctttgatttacttcaaatcagtaac
ataaaccgaaagacagttggagcaaaatcgtttcggggtccagaccccactatcccagca
tatcgtttcattcggtttgaccatatacctccgtgtaaaccagagaaattaaaaaagatt
gtcaaactcatacggcaaaatgagggctttatcctttcagccaccctgagacaggacagg
caatctagaggcactatccttgctttagaaggtcctggcatcagtgagaggcagtttgag
atcatttccaatggccgggccaacaccctggatcttatctattgggtggatggcttccag
aatgtgatttccctggaagacgtggaccttgccgactcgcagtggaagaacctcaccgtg
caaataacaggggagaactacaacctctatgttggctgtgacctaattgacagcttcatc
ctggaggagcctttctatgagcagctgaaagcagagaacagcagaatgtatgtggcgaaa
gggtccattcgggagaatcatttcaggggtcttttgcaaaatattcagttaatctttgat
acttcaatagaggatgttctgcgtaaaaaaggatgccagaggagccagtcaactgaagtg
aacaccatcaatgagagcacagaaatccttcacttgagccctgctgtcacaaccgagtac
gtgggcgagaagccagagaagaaggctgagttctgtgaccgctcctgtgaagagctggga
acgatgttcactgagctcactggcctgcgcattgtggtgaacaacttagctgataacctc
caaaaagtgtctgaagagaaccaaattatgtgggaattgattgggcctaacaaaacactg
aagaaccagtcagtttgctggcaggatggccgtgtctttgcagataatgaaagctggatt
gtagatagctgcaccaaatgcacctgccaggattctaaaattgtgtgccatcaaatcacc
tgcccagcagtctcctgtgccgatccatcttttgttgaaggtgaatgctgtccagtctgc
tctcactctgatgacagtgaggaaggctggtcaccatggtcagactggacaaagtgctcc
gttacctgtggctctgggactcagatgcgaggaaggtcgtgtgatgtcaccaggagtgct
tgtacaggcccacacatccagacaaggatgtgcagctttaagaaatgtgaccatcgcata
cgtcaagatggtggctggagtcactggtctccctggtcttcctgttcagttacttgtggg
gtaggaaatatcacccgcatccgcctctgcaactcccctatcccccagatgggtgggaaa
aactgtgtgggaaatgggcgtgaaacagagaagtgtgagaaggttccatgtccagtgaat
ggccagtggggtccttggtctccgtggtctgcctgcactgttacctgtggaggaggaatt
cgtgagaggtctcgcctctgtaacagtccagagccacagtatggaggaaagccatgtgtg
ggagataccaagcaacatgatatgtgcaataagaaggactgcccaattgatgggtgtttg
tcaaatccttgctttcctggagcagaatgcaacagttacccagatgggtcttggtcatgt
gggccatgcccagcaggttaccttggcaatggtaccgtctgtgaggatcttgatgagtgt
atagctgtgtcagatgtttgctttaaggtgaatcaggtccatcgctgtgtgaacacgaat
ccaggtttccactgcttgccatgtcctccacgctataaaggaagtcagccctatggggta
gggctggaagttgccaaggcagagaagcaagtctgtgaacctgagaatccatgcaaggac
aagacacacagctgccataagtctgcagagtgcatctatctgggccatttcagtgatcct
atgtacaaatgtgaatgtaggacaggctatgctggtgatggacgcatctgtggtgaggat
tcagatttggatggctggcctaataataacttggtctgtgctgctaatgcaacataccat
tgtgtgaaggataactgcccccttctgcctaactctggtcaagaagactttgataaagat
gggaagggagatgcttgtgatgaggatgatgacaatgatggcgttgaagatgacaaagac
aattgccctcttctgtttaaccctcgtcaatttgattatgacaaggatgaagttggtgac
cgctgtgataattgcccttatgtgcacaaccctgctcagattgacacagataataatggg
gagggtgactcatgtgctgtggatattgacggagatgatatttttaatgaacgagataat
tgtccttacgtctataacacagaccagagtgatacagatggtgatggagttggtgatcag
tgtgataattgtccattgatgcataatccagaccagaccgatgcagataatgaccttgtt
ggtgaccagtgtgacaacaatgaggacatagatgaagatggccaccagaacaaccaagat
aactgcccttacatccccaatgctaaccaggctgaccatgataaagatggtaaaggagat
gcctgtgattctgatgatgacaatgatggtgtcccagatgacagggacaattgtcgcctc
agatacaaccctgagcaggaggactctgatggtgatggcagaggtgatatttgcaaagat
gactttgacaatgacaatgtcccagatatttatgatgtatgccctgaaaacaatgccatc
agtgaaactgatttcagaaagttccagatggtccccctggaccccaagggaacagctcag
attgatcccaactgggttattcgccaccaaggcaaggaactggtacagactgccaactct
gatcctggaatagctgtaggctacgatgagttcagctctgttgacttcagcgggacgttc
tatgttaacacagaccgcgatgacgactatgctggctttgtgtttggctaccagtccagc
agtcggttttatgttctgatgtggaagcaggtcactcagacctactgggaggacaaaccc
accagggcttatggctattctggtgtatcgctcaaagtagtgaattcaacaactggtact
ggtgaacacttgagaaatgctctctggcacacaggaaacacccctggacaggtgcgtact
ttgtggcatgatcccaagaacattggctggaaagattatactgcttacaggtggcatttg
attcataggcctaaaacaggattaataaaagttttagtgtatgaagggaaacaagtcatg
gtggattctggaccgatctatgacacaacctttgctggtggacgattaggtctttttgtc
ttttctcaagagatggtctatttctctgacctcaaatatgaatgcagagatgcttga
DBGET
integrated database retrieval system
