Nipponia nippon (crested ibis): 104018056 Help Entry 104018056         CDS       T05756                                  Symbol HTT Name (RefSeq) huntingtin   KO K04533   huntingtin Organism nni  Nipponia nippon (crested ibis) Brite KEGG Orthology (KO) [BR:nni00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:nni03019]     104018056 (HTT)    04131 Membrane trafficking [BR:nni04131]     104018056 (HTT)    03029 Mitochondrial biogenesis [BR:nni03029]     104018056 (HTT) Messenger RNA biogenesis [BR:nni03019]  Eukaryotic type   mRNA surveillance and transport factors    mRNA cycle factors     Common to processing body (P body) and stress granule      104018056 (HTT) Membrane trafficking [BR:nni04131]  Endocytosis   Rab GTPases and associated proteins    Rab associated proteins     104018056 (HTT) Mitochondrial biogenesis [BR:nni03029]  Mitochondrial quality control factors   Regulator of mitochondrial biogenesis    Other regulator of mitochondrial biogenesis     104018056 (HTT) SSDB OrthologParalogGFIT Motif Pfam:  Htt_C-HEAT Htt_N-HEAT Htt_bridge Htt_N-HEAT_1 HEAT HEAT_GCN1 HEAT_EF3_N Motif Other DBs NCBI-GeneID:  104018056 NCBI-ProteinID:  XP_009469427 LinkDB All DBs Position Unknown AA seq 3096 aa AA seqDB search MATMEKLMKAFESLRSFQQQQGPAAIPEEPLQRPKKELSTTKKDRVNHCLTICENIVAQS LRNSPEFQKLLGIAMELFLLCSEDAESDVRMVADECLNKVIKALMDSNLPRLQLELYKEI KKNGASRSLRAALWRFAELAHLVRPQKCRPYLVNLLPCLTRISKRPEESVQETLAAAIPK IMAAFGNFANDNEIKVLLKAFIANLKSSSPTIRRTAAGSAVSICQHSRRMQYFYAWLLNV LLGLLVPVEDDHPTLLILGVLLTLRYLIPLLQQQVKDTSLKGSFGVTRKETEISPSPEQL IQVYELTLHYTQHQDHNVVTGALELLQQLFRTPPPELLHALTISGGIAQVSVSKDESASR SRSGSIVELIAGGGSSCSPVLARKHKGKILLGEEEGLEDDSETRSDVSAASFAASMKGEI TSELASSSGVSTAGSVGSSAADSTGHDIITEQPRSQHTLQSDSVDLTSCDLTSTATEGEE DDVLSRSSSQISAVQSDPTMDLNDGTQASSPISDSSQTTTEGPDSAVTPSDSSEIVLEGA EGQYSGMQIGQLQDEEDEAANILQDDSSESFRNSSIALQQPHLLKTVSHSRQPSDSSIDR FTSKEDAADPGDHENKPSRVKGDIGHYTDGSSAPLVHCVRLLSASFLLTGEKGALVPDRD VRVSVKALAVSCVGAAVALHPESFFSKLYKTPLEAVGEEYEEQYVSDILNYIDHGDPQIR GATAILCGTIVNSILIKSRFDVEKWLINVRSSTGNLFSLVDCIPLLQKMLKDESSVTCKL ACTAVRHCIMSLCSSSYSELGLQLIVDLLTLKNSSYWLVRTELLETLAEVDFRLVSFLEG KTESLHRGVHHYTGLLKLQERVLNNVVICLLGDEDPRVRHVAAASLMRLVPKLFYNCDQG QADPVVAVARDQSSVYLKLLMHETQPPSHFAVSTITRTYRGYNMVQSPTDVTMENNLSRV IAAISHALTISTTRALTFGCCEALCLLSTTFPVCTWSVGWHCGVSQPSPSDEAQKGCTIG MAGMVLSLLSSAWFPLDLSAHQDALILTGNLLAASAPKCLKNPWSAEEDSNQGAAKQEEP WPALADRTLVTLVEQLFSHLLKVINICAHVMDDVAPGPAVKAALPSLTNPPSLSPIRRKG KERESVEQASVPMSPKKSGETSPATRQTDATGPVPTSKSSSVGSFYHLPSYLKLYDVLKA THANYKVTLDLQNSNEKFGCFLRSALDVLSQILELATLQDIGKCVEEILGYLKSCFNREP TMATVCVQQLLKTLFGTNLASQYDGLSSNPNKAQGKAQRLGSSNLRPGLYHYCFMAPYTH FTQALADASLRNMVQAEQEHDASGWFDVLQKVSTQLKTSITSAAKHRADKNAIHNHIRLF EPLVIKALKQYTTTTSVQLQRQVLDLLAQLVQLRVNYCLLDSDQVFIGFVLKQFEYIEVG QFRESEAIIPNIFFFLVLLSYERYHSKQIIGIPKIIQLCDGIMASGRKAVTHAIPALQPI VHDLFVLRGTNKADAGKELETQKEVVVSMLLRLIQYHQVLEMFILVLQQCHKENEDKWKR LSRQIADIILPMLAKQQMHIDSHDALGVLNTLFEILAPSSLRPVDMLLRSMFVTPKTMAS VSTVQLWISGILAVLRVLISQSTEDIVLSRIQELSFSPYLISCQAINRLRRGENNLPTPE DYTEVKQAKYLPEETFSRFLLQLVGILLEDIVTKQLKVDMNEQQHTFYCQELGTLLMCLI HIFKSGMFRRITAAATRLFTGDGSDGSFYTLESLSDLVQSMIPTHPSLVLLWCQILLLVN YTNYNWWSEVHQTPKRHSLSTTKLLSPQISGDSDESDSESKRGMCNREIVRRGALILFCD YVCQNLHDSEHLTWLIVNHVQDLINLSHEPPVQDFISAVHRNSAASGLFIQAIQSRCENL AAPTTLKKTLQCLEGIHLSQSGAVLTLYVDKLLCTPFRVLARMVDTLACRRVEMLLAATL QNSITQLPVEELDRIQEYLQNSGLAARHQRLYSLLDRFRLMVAPDTTSPSPLVTSHPLDG EDQPALENVILDKDWYVSLVRSQCCIKSDSALLEGAELVNRIPQPDLNSFMTSKEFNLSL LAPCLSLGMNEISRDQKSSFFETARRVTLDHVSTTVQNLPANHQVFQPLLPTEPSAYWKK LSEIFGDEVMYQSMMTLCRALAQYLLLLSKLPAGLRVPPDKEDDILKFVVMSVEALSWHL MHDQIPLSIDLQAGLDCCCLTLQQPSLWNLLASAANVTYACSLINCIRFIIEAVAVEPGN QLLSPERKKNTSKGLSEGEIDSNTQKTKHITAACEMVAEMVECLQTVLALGHKRNSSIPA FLTPVLKNIIISLARLPLVNSYTRVPPLVWKLGWSPKPAGDFGTVFPEIPVEFLQEKEIF KEFIYRINTLGWISRTQFEETWATLLGVLVTQPIVMDQEENQQEEDTERTQINVLAVQAI TSLVLSAMTIPVAGNPAVSCLEQQPRNKALKALDTRFGRKLSVIRGIVEQEIQAMVSKRD NIATHHLYQAWDPVPSLSPATTGALISHEKLLLQINTEREIGDMDYKLGQVSIHSIWLGN NITPLREEEWGEDEEDENDIPAPSSPPTSPINTRKHRAGVDIHSCSQFLLELYSQWILPS NPSKRTPVILISEVVRSLLAVSDLFTERNQFEMMYTTLTELRKVHPSEDEILVQYLIPAT CKAAAVLGMDKAVAEPVSRLLESTLRSTHMPSRIGALHGILYILECDLLDETAKQLIPII SEYLLSNLRGVAHCVNIHNQQHILVMCAAAFYLIENYPLDVGPEFSAGIIQMCGVMVSGS DESTPSTIYHCVLRGLERLLLSEQLSRLDSESLVKLSVDRVNVQSPHRAMAALGLMLTCM YTGKEKISPSRTTDANPAAPDSESVIVAMERVSVLFDRIRKGFPFEARVVARILPQFLDD FFPPQDVMNKVIGEFLSNQQPYPQFMATVVYKVFQTLHSTGQSSMVRDWVMLSLSNFTQR TPVAMAMWSLSCFFVSASTSQWISAILPHIISRMGKSEQVDVNIFCLVAIDFYRHQIDEE LDRRAFQSVFEVVASPGTPYHCLLTCLQNVHKVTAC NT seq 9291 nt NT seq  +upstreamnt  +downstreamnt atggccaccatggagaagctgatgaaggccttcgagtcgttacgctccttccagcagcag cagggtccggctgccatccccgaggagccgctccagagaccaaagaaagaactttcaact accaagaaagatcgagtgaatcattgcctaacaatatgtgaaaacatagttgctcagtct ttaagaaattctccagaatttcagaaactgctggggattgctatggaactctttctcctc tgcagtgaggatgcagaatctgatgtccggatggttgctgatgaatgccttaataaagtt attaaagccttgatggattccaatcttcctaggttacaattagaactgtataaagagatt aaaaagaacggtgcttccagaagtctacgtgctgcactctggagatttgctgagcttgcc catctagttcggcctcaaaaatgcaggccgtacttagtgaaccttttgccctgtctaaca cgaataagtaagagacccgaagaatcggtacaagagacactagctgcagcaataccaaaa atcatggcagcgtttggcaattttgcaaacgacaatgagattaaggttttattgaaggct ttcatagctaatcttaaatccagttcccctactatccgtcgaacagcggcaggatcagca gtaagcatctgtcaacattcgcgaagaatgcagtatttttatgcctggttattgaatgta cttttaggcttgttggttcctgtagaagatgatcatcctactcttttaattctgggtgtt ttacttacactaaggtatctcatacctttattgcaacaacaagtaaaggataccagcctg aaaggcagttttggtgtaacaagaaaagaaacagagatttcaccttcaccagaacaactt atacaggtttacgaattgactctgcattacacccagcatcaggaccataatgttgtgact ggagctttagaattattacaacaactctttagaacaccaccacctgaacttcttcatgcc ctgaccatttcagggggcattgcacaggtcagtgtatccaaagatgagtctgctagcagg agccgcagtgggagcatagtggaacttatagctggaggggggtcttcatgcagccctgtt cttgcgagaaagcataaaggtaaaatacttcttggtgaagaagaaggtttggaggatgat tctgaaacacgatcagatgtcagcgctgcatcatttgcagcttctatgaagggcgagata accagtgaactagcttcttcatcaggtgtatcgacagctgggtcagtagggagttcagct gctgattctactggacatgatatcattaccgagcaaccacgttctcaacatacgttgcag tcagactctgtagacctgacaagctgtgatttgacaagtacagctactgaaggggaagaa gatgatgtccttagtcgcagctccagccagatcagtgctgtccagtcggatcccactatg gacttgaacgatggtacacaggcttcctcaccaattagtgatagctctcagactactaca gaaggtccagactctgctgtaaccccttcggacagttctgaaattgttttggagggtgct gaaggacagtattctggaatgcaaattgggcagctgcaggatgaggaagatgaggctgca aatattctgcaagatgattcatcggagtctttcagaaattcttctattgctcttcaacag cctcacctgttgaaaactgtgagccatagtaggcagccttctgatagcagcatagataga tttacatcaaaagaagatgcagcagatcctggtgatcatgaaaataagccctccagggta aagggagacataggtcactatacagatggaagttctgctcctttagtacactgcgttaga cttctgtcagcctcttttctacttactggggagaaaggagctttggttcctgatagagat gtgagagtcagcgtaaaagccctggcagtaagttgtgttggagcagccgttgcgcttcac cccgagtctttcttcagcaaactgtataaaacaccccttgaagcagtgggagaagagtat gaggagcagtatgtctcagatattctgaactacattgaccatggagatccccagattaga ggagctactgccattctgtgtggaacaattgtcaactccattctaattaaatcccgcttt gatgtggaaaaatggctaataaatgtcagaagctcaacaggaaatctcttttccttggta gactgcatacctctgttacagaaaatgctgaaagatgagtcctctgttacatgcaaactg gcttgtacagctgtgaggcattgcatcatgagcttatgtagtagcagttacagtgaacta ggtttacaattaattgttgacctccttacgctgaagaacagctcatactggctagtaagg acagaacttctggaaacacttgcagaggtagattttcggctagtcagcttcttggaagga aaaaccgagagcttgcacagaggtgttcatcattatactggtctactaaagcttcaggag agagtgcttaataatgttgtaatatgtctgcttggagatgaagatccaagagtgagacat gtagctgcagcttcattaatgaggcttgttccaaagctattttataactgtgatcaagga caggctgatccagttgtggcagtagcaagagaccaaagcagcgtctacctgaaactacta atgcatgaaacacagcctccatctcactttgcagtgagcactatcaccagaacatataga ggttacaatatggtgcaaagtccaacagatgtcactatggaaaacaatctctcaagggtt attgcagcaatttcccatgcattgaccatatccactacaagagcacttacatttggctgc tgtgaagctttgtgtcttctctccacaacatttccagtctgcacctggagtgtgggatgg cactgtggtgtttcccagccaagtccttcagatgaagctcagaagggctgtaccattgga atggccggcatggtcctgtctctcctttcatcagcatggttcccgctggacctctctgca catcaggatgctttgattttgactggaaacttgcttgcagcaagtgctcccaagtgcttg aagaatccctggagtgctgaagaagattcaaaccaaggtgctgcaaagcaggaggaaccc tggccggctctggcagatcgaactcttgttactttagtagaacagctcttttctcatctg ctgaaggtcattaatatctgtgcacatgtaatggatgatgttgctcctggcccagcagta aaggcagcattaccttctctcacaaacccaccatctcttagcccaattcggaggaagggg aaagagagggaatctgtcgaacaggcatctgtgccaatgagccctaaaaagagtggtgaa acgagtccagctactaggcaaactgatgctactgggcctgttccgacaagtaaatcatcg tcagtaggaagcttttatcatcttccatcatatctgaagttatacgatgtcttgaaagca acccatgctaattataaggttactttggatctccagaacagtaatgaaaagtttggatgt ttcttacggtctgccttagatgttctgtctcaaatcttggaacttgctactcttcaagac attggaaagtgtgtagaagaaattttgggatacctaaaatcgtgtttcaacagagaacca acaatggcaacagtttgtgtacagcagttattgaaaacgttgtttgggacaaatctggct tctcaatacgatggcttgtcttcaaaccccaacaaagctcaaggcaaagctcaacgctta ggctcttccaatttgagacctggtctctatcattattgcttcatggcaccatacacacat tttacacaggcccttgctgatgctagtctaaggaacatggttcaggctgagcaggaacac gatgcttcaggatggtttgatgtgctgcaaaaagtttctacacagctgaaaactagcatt accagtgcagcaaaacatcgtgctgataagaatgctattcacaatcacattcgtttattt gaaccccttgtcataaaagcattgaaacaatatactacaacaacatcagtacagctgcag agacaagttctagacttgcttgctcaactggttcaactgcgagttaactactgtcttctg gattcggatcaggtgtttattggatttgtgttaaagcagtttgaatacattgaagtagga cagttcagggagtctgaagcaattattcctaatatcttttttttcctggtgttgctgtct tatgagcggtatcattccaaacagataatcggaattcctaagattattcagctgtgtgat ggtatcatggccagtgggaggaaagctgttacacatgcaataccagctctgcaacccatc gttcatgatctctttgtgttaagaggaacaaataaagctgatgctggaaaagagttggaa acacaaaaggaggtggtagtgtcaatgctgctgagacttattcagtaccatcaggtacta gagatgttcatcttagtgttgcaacagtgtcataaagaaaatgaagacaaatggaaaaga ttgtcccggcaaatagctgacattattctcccaatgcttgcaaaacaacagatgcatata gactctcatgatgctctgggagtattgaacactttgtttgaaattttggctccttcatcc cttcgccctgtggacatgcttttaaggagtatgtttgttacccctaaaacaatggcatca gtgagtactgtccagctatggatttctggaattttagctgtccttagagttctgatttca cagtcaacagaagacatcgttctatcccgtatacaagagctttccttctcaccatatttg atttcatgtcaagcaattaacagactgagacgtggagaaaataacttacccacaccagag gattacactgaggttaaacaagctaaatatctgcctgaagagacattttctaggttctta ttacaactggttggcattctactggaagatattgttaccaaacaattgaaagtggacatg aatgagcagcaacatactttctactgccaggagctgggcaccctgcttatgtgcttaata catatcttcaaatcagggatgtttagaagaatcacagctgcagccaccagactttttaca ggagatggatctgatggtagtttctatacccttgaaagtttgagtgatcttgttcagtcc atgattcccacgcatccttctttagttctcctctggtgtcaaatcctgcttcttgtcaat tataccaactacaactggtggtcagaagtgcatcaaacaccaaagagacacagtctttct actactaaattgcttagcccacagatatctggagacagcgatgaatcggattcagaatct aaacgtggcatgtgcaatcgagagatagtgagaagaggagcactcattcttttttgtgat tatgtttgtcaaaacctacatgattcagaacacttgacctggcttattgtgaatcatgtt caagacttgattaatctgtctcatgagcctccagtacaagactttattagtgctgttcac aggaattcagcagccagtggtctcttcatccaggccattcaatcacggtgtgagaatctt gcagctcccacaactctgaagaagacactacagtgcttagagggaatacatctcagccag tctggggctgttttaacattatatgttgataagcttttgtgtactccattccgtgtgctg gctcgcatggttgacacactggcttgccgtcgggtagaaatgcttttggctgcaacttta cagaacagcattactcagttaccagttgaagaactggatagaattcaggaatatcttcag aacagtggattagcagcaagacaccagagactttactcgctcttggataggtttcgtctt atggtagcaccagacacaactagtccttcacctctggttacctcacacccactagatgga gaagaccaaccagctttagagaatgtaattctagacaaagactggtatgtgtcactagtg aggtcgcagtgttgcatcaagtctgactcagcactgctagaaggtgcagagctggtaaat aggattcctcagcctgacctgaactccttcatgaccagcaaggaattcaacctaagcttg ttagcaccttgtttaagtcttggcatgaatgaaatctcaagagaccagaagagtagtttc tttgaaacagctcggagggtaactctggatcatgtgtctaccactgtacaaaaccttcct gccaaccaccaggtttttcaacctctcttgccaactgagccatcagcctactggaaaaaa ctaagtgaaatctttggagatgaggtgatgtatcagtccatgatgacactttgtcgtgca ctggctcagtatttgttgttactctcaaaactaccagctggtctccgtgttcctcctgac aaagaggatgatatcctgaaattcgtagttatgtcagtagaggcattatcatggcattta atgcatgaccagattccattaagtatagatcttcaagctggtctggattgttgctgtctg acattacagcagcctagtctctggaatttgctggcttctgcagctaatgtgacatatgct tgctccttaattaattgcattagatttatcatagaagcagttgctgttgaacctggtaat caacttcttagtcctgaaagaaagaagaatacttcaaaaggcttaagtgagggtgaaatt gattcaaacacacagaaaactaaacacattactgcagcttgtgaaatggtagctgagatg gtggaatgcttacagactgtcttggcactggggcacaaaagaaacagcagtatcccagcg tttcttactcctgtcctcaagaacatcatcatcagtttagcaaggctgcctctagtgaac agttacacaagagtacctcctttggtctggaaattaggctggtcaccaaagcctgcaggt gactttggcacagtttttcctgaaataccagtagaatttctacaagaaaaagaaatcttt aaggagttcatctatcgcattaatacgcttggatggatcagccgtactcagtttgaagag acttgggctactttgcttggtgtgcttgtaactcagcctattgtaatggaccaagaggag aaccaacaagaggaagatacagagaggacccaaatcaatgttcttgcagtacaagccata acttccttggtgctgagtgcaatgacaatacctgttgcaggcaatccagcggttagctgt ttggaacagcagccccgcaacaaagctttaaaagctctggacacaaggtttgggaggaag ctaagtgttatcaggggaattgttgaacaggaaatccaagcaatggtatctaagagagac aatattgctactcatcacttataccaagcttgggaccctgttccatcactttctcctgct actacaggtgctcttatcagccatgaaaaactcttactgcagatcaatactgaacgagaa ataggagatatggattataaactgggacaggtctctatacactccatatggttaggaaat aatatcactccattgagagaagaagagtggggtgaggatgaagaagatgagaatgacata cctgctccttcctcaccaccaacctctcctattaacaccaggaaacaccgggctggtgta gatatacattcttgttctcagttcttgcttgaactgtatagtcagtggatattgccatca aaccctagcaagagaacgccagtcattttgattagcgaagtggtgcgatcacttctggca gtatcagacttatttacagaaaggaatcagtttgagatgatgtatacaacgttgacagaa ctgcgaaaggtgcatccatcagaagatgagattcttgtacagtatttgataccagccact tgtaaagctgctgcagttctcggaatggataaagctgtggctgaaccagtaagtcgactg ctggaatcaaccctaagaagcacccatatgccaagtcggattggagctctgcatggaatt ctttatatccttgagtgtgacttgcttgatgagacagcgaagcaactcattccaattatc agcgagtatctgctctccaatttgagaggagtagcacattgtgtgaatatccataaccaa cagcacatcttggtaatgtgtgcagctgctttctatttgatcgagaattacccacttgat gtagggcctgaattctctgcgggaatcatacagatgtgtggagtcatggtgtctggaagt gatgaatcaacgccatccactatttatcattgtgtcctgagaggattagaacgactcctt ctttcagagcaactttctaggctggatagtgaatcgctagttaaactgagtgttgacaga gtcaatgtgcagagtccccacagagcaatggcagcacttggattaatgctgacttgcatg tacacaggaaaggaaaaaatcagccccagtcgtaccacagatgcaaatcctgctgctccc gacagtgaatctgtgatcgtagctatggaacgagtgtctgtcctttttgataggatcagg aagggatttccttttgaagctagagtagtggctcgcatccttccacagttccttgatgat tttttccccccacaagacgtaatgaataaagttattggagaatttttatccaatcagcag ccttacccacaattcatggcaacagtagtgtataaggtattccagacactacatagcact ggacagtcttcaatggtccgtgactgggtgatgctgtctctctctaatttcacacaaaga acacctgtggcaatggcaatgtggagtctttcctgtttttttgtcagtgcttccaccagt caatggatttcagcaattcttccacatattatcagcagaatgggaaaatcggagcaagtg gatgttaacatcttctgtttggtggccatagacttctatcgacatcagatagacgaagaa ttagatcggagggcctttcagtcagtgtttgaggtggtagcatctccaggaaccccatat cattgcttactaacttgtttgcaaaacgtccacaaggtcacagcatgttga

DBGET integrated database retrieval system