KEGG   Nipponia nippon (crested ibis): 104018118
Entry
104018118         CDS       T05756                                 
Symbol
MSH2
Name
(RefSeq) DNA mismatch repair protein Msh2
  KO
K08735  DNA mismatch repair protein MSH2
Organism
nni  Nipponia nippon (crested ibis)
Pathway
nni03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:nni00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    104018118 (MSH2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:nni03400]
    104018118 (MSH2)
DNA repair and recombination proteins [BR:nni03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Mismatch and loop recognition factors
     104018118 (MSH2)
SSDB
Motif
Pfam: MutS_V MutS_III MutS_IV MutS_II MutS_I AAA_27
Other DBs
NCBI-GeneID: 104018118
NCBI-ProteinID: XP_009469498
LinkDB
Position
Unknown
AA seq 914 aa
MGLGAEMRATPSTGTVPPASAASPATTERAQLAPRGPHRPPLPWQRPGPGDGTQKLESVV
LSKMNFESFVRDLLLVRHYRVEVYKNKAGSKSIKENDWYLAYKGSPGNLAQFEEVLFANN
DMSTAIGVVGVKLSTTDGQRVVGVGYVDTTLRKLSVCEFPDNDQFSNLEALLVQLGPKEC
VLPGGETAGEMGKLRQVIQRGGILITDRKKADFTTKDIVQDLNRLLKSKKEEQMNSAALP
EMEKQVAVSSLSAIIKFLELLSDESNFGQFELTTFDLSQYMVLDNAAVQALNLFQSSVEN
ANTAQSLAGLLNKCRTPQGQRLVNQWIKQPLMDKNRIEERLNLVEAFVVDPELRQCLQED
LLRRFPDLNRLAKKFQRQAANLQDCYRMYQAINQLPNVVQALEKHEGAHQMLLLAVFITP
LNDIYSDFSKFLEMIETTLDMDKVENHEFLVKASFDPNLTELREKMNELEEKMQSFLKSA
AKELGLEAGKSIKLETNSQFGHHFRITCKEEKVLRNNSKYGIVDTQKNGVKFTNSKLSSV
NDEYIKNREEYEEAQDAIVKEIINIASGYAEPIQTMNDVIAQLDAIVSFAHVSNGAPVPY
VRPVILEKGQGRIVLKGARHPCIEVQDEVAFIPNDITFEKGKQMFHIITGPNMGGKSTYI
RQTGVIVLMAQIGCFVPCNSAEITVVDCILARVGAGDSQLKGVSTFMAEMLETASILRTA
SENSLIIIDELGRGTSTYDGFGLAWAISEYIACKIRAFCMFATHFHELTALADQVPTVNN
LHVTALTTDDTLTMLYRVKEGVCDQSFGIHVAELAAFPKHVIESAREKALELEEFQNIGK
SKESEGEPPAKKFYREREEGEKIIQDFLCQVKALPLTDMSEEDIKIKLKQLRNDVLAKNN
SFVNEIISRTKVTS
NT seq 2745 nt   +upstreamnt  +downstreamnt
atggggctcggcgccgagatgagggcgacaccgagcacgggcactgtgcccccggcctcg
gccgcctcgccggcgaccaccgagagggcgcagctcgccccgcggggccctcaccgcccg
ccgttgccatggcagcggccggggccgggggacggaactcagaagcttgagagcgttgtg
cttagtaaaatgaactttgaatctttcgtgagagatctgcttctggttcgtcattacaga
gttgaagtttacaagaacaaagcagggagcaaatctatcaaagaaaatgactggtattta
gcatacaagggttctccaggaaatcttgcccagtttgaggaagttctctttgccaacaat
gatatgtcaacggccattggggttgtgggggttaagctgtctactactgatggacaaaga
gtagtaggagtggggtatgtcgacactacgctgagaaaattgagtgtctgtgagttccca
gataatgatcagttctcaaacctcgaagctttactggttcaactaggaccgaaagagtgc
gtgctaccaggaggagagactgcaggagagatgggaaaattacgacaagtcattcagagg
ggaggaatcctgattacagacaggaagaaggcagatttcacaacaaaagatattgttcag
gatctcaatcgcttgttaaaatcaaaaaaagaagaacaaatgaatagcgcagcattgcca
gagatggaaaagcaggttgctgtttcgtctttgtcggccattatcaagtttttagagttg
ctgtcagatgagtctaattttggacaatttgaactgactacttttgatcttagtcaatac
atggttctagataatgcagctgttcaagccctcaacctttttcagagttctgtggaaaat
gctaacactgcacagtctctagctggtttactaaataaatgcagaacccctcaaggacaa
agactagttaatcagtggatcaaacaaccacttatggacaagaatcgaattgaagaaagg
ttgaatttggttgaagcttttgtggtggatccagaactacgtcagtgccttcaagaagat
ctcttacgtcgcttcccagaccttaaccggctggcaaagaaatttcagagacaagcagca
aacttacaggactgttaccgaatgtatcaggctattaatcaactgcctaatgttgtacaa
gcactagaaaaacatgaaggagctcaccagatgttgttgttggcagtgtttataacacct
cttaatgatatctactctgacttctcaaagtttctggagatgatagaaacaacattggac
atggataaggtagagaatcatgaatttcttgtcaaggcttcttttgatcctaatttgaca
gaattaagagagaagatgaatgaactggaagaaaaaatgcagtcctttttaaagagtgca
gccaaagaactaggtttggaagctggcaaaagtataaaactggagacaaattcacagttt
ggacatcactttcgaataacttgtaaggaggaaaaagttctccgtaacaattcaaaatat
ggaatagttgatacacagaagaatggtgtgaaatttactaacagcaaactgagctctgtc
aatgacgagtatataaagaacagagaagagtatgaagaggctcaggatgcaattgttaag
gaaatcattaacattgcttcaggttatgcagaaccaatacagacgatgaatgatgtgata
gctcaattagatgcaattgtcagttttgctcacgtgtcaaacggagcaccagtgccctat
gtccgtcctgtcattctggaaaagggacaaggaaggattgtgctgaaaggtgccaggcat
ccttgcatcgaagtgcaagatgaggtggccttcatccccaatgacattacatttgagaag
ggcaagcagatgttccacattattactggccctaacatgggggggaaatcaacctacatc
cgacagacaggggtgattgttcttatggcccaaattgggtgttttgtaccatgcaactct
gcagaaataactgttgtggattgtatcctggctcgggtgggagctggagacagtcagctg
aaaggcgtgtctactttcatggctgaaatgttagaaacggcttcaatccttaggacagca
tctgaaaactccctgataatcattgatgagctgggaagaggaacttctacctatgatggc
tttggcttggcatgggctatttcagaatacattgcttgcaaaatccgtgctttctgtatg
tttgctacacattttcatgaactgacagctcttgctgaccaagtgccaacagtaaataac
ctacatgttactgctctgaccactgatgacacattgacgatgctttatcgtgtcaaggaa
ggtgtttgtgaccagagttttggaatacacgtagcagagttggcagctttcccaaaacat
gtgatagaaagtgcaagagagaaagcattggagctggaggagtttcaaaacattggcaag
tccaaggaatctgaaggagaaccaccagccaagaaattctacagagaaagagaggaaggt
gaaaagataattcaggattttctttgtcaagtgaaagcgctgcccctgacagatatgtca
gaagaagacatcaaaatcaagctgaaacagctgagaaacgatgtgttggcaaagaacaac
agctttgtgaatgaaatcatttcccgaacgaaagttacatcatga

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