Nipponia nippon (crested ibis): 104018407 Help Entry 104018407         CDS       T05756                                  Symbol COL5A3 Name (RefSeq) collagen alpha-3(V) chain   KO K19721   collagen type V/XI/XXIV/XXVII, alpha Organism nni  Nipponia nippon (crested ibis) Pathway nni04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:nni00001]  09140 Cellular Processes   09142 Cell motility    04820 Cytoskeleton in muscle cells     104018407 (COL5A3)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:nni00536]     104018407 (COL5A3) Glycosaminoglycan binding proteins [BR:nni00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    104018407 (COL5A3) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Collagen COLFI Laminin_G_2 Laminin_G_3 Laminin_G_1 Motif Other DBs NCBI-GeneID:  104018407 NCBI-ProteinID:  XP_009469809 LinkDB All DBs Position Unknown AA seq 1730 aa AA seqDB search MRTWLCRINPPRARAQPMIGVRLPAERGEHPQPSPHAPTVPVDVLQTLGMQDGRDGVSVT TGICPQRPGTEDPDFAFRVDNRTQLSAPTRQLFPDGSFPEDFSILATVRARRGGQAFLLS VYDERGVQQLGVEIGLSPVFLYEDQEGRPAPEQYPVFRRVNLADGRWHRVALAVEGTNVS LLVDCHLLATLPLERGPQPLVSTEGVTIFGARLLDEEVFEGDVQQLLIVADPEAARSYCQ LYMPDCDSASPKASAPTPTPSAEESSPPPVPTSLATTVSVTLNGTDPFEDTGEELVLELE EDGDSGADSTELLGYEDYYDGDPASRERFGPAEREETVIRAPQEPSLKGEKGEPAIVEPG RRFEGPPGPPGPAGEAGPLGPPGLPGLPGDPGDQGPPGRPGLPGADGIRGPAGTMIMLPF QFGGDSLKGPTVSFQEAQAQAILQQAKLAMKGPPGPMGLTGRPGPLGLPGHPGLKGEAGD MGPRGPRGIQGPPGPPGKLGRRGRAGADGARGLPGETGPKGDRGFDGLPGLPGEKGHRGD VGKPGPAGPPGEKGAKGSDGLPGPRGQPGEPGMRGLIGSRGSPGPPGPPGASGIDGAPGP KGNVGIQGEPGPPGQQGNPGPQGLPGPQGPVGLPGEKGPPGKPGIQGVAGADGPPGHPGR EGPAGEKGLQGPVGAPGPVGYPGPRGVKGAFGVRGLKGSKGEKGEDGFPGFKGDMGPKGE RGDQGLLGPRGEDGPEGLKGQTGPMGEPGAPGPAGEKGKLGVPGLPGYPGRQGPKGSTGF QGPMGLAGEKGKRGKAGQAGQTGQRGPPGLPGERGLPGPTGKPGPKGDPGHDGAPGAVGE KGPQGPQGPNGFPGTKGPPGPAGKYGLPGHPGQRGEPGFHGKTGPPGPSGVVGPQGKSGE TGPVGERGHPGPPGPPGEQGLPGAAGREGAKGDPGPAGIPGKSGPPGIHGFPGTRGAPGE MGPPGLKGGEGPPGPPGPTGSPGERGPTGAAGGIGLPGRGGAQGPPGPVGEKGSPGERGP MGPAGHDGIQGPVGLPGPGGPPGPAGEDGDKGEMGLPGQKGSKGDKGEAGPPGPTGIQGP IGHPGPAGADGEPGRRGQQGMFGQKGDEGSRGHLGLSGPPGLQGMPGPPGEKGENGDVGP MGPPGAPGPRGPQGPSGAEGPQGMPGGVGQPGAVGEKGEPGEAGDPGAPGEPGPPGVKGD VGEKGDAGQPGAAGPPGKKGPPGEDGAKGNLGPIGFPGDPGPPGDPGVPGLDGAAGEKGD SGDPGLPGPPGASGEPGPPGPPGRRGPVGPMGREGRQGEKGAKGQPGTDGPPGKTGPVGP QGPPGRPGSEGLRGIPGPAGEQGLLGAPGQAGPPGPLGPVGLPGLKGDPGHKGDKGHAGL IGLIGPPGEMGEKGDQGLPGIQGPPGPKGDPGLAGPTGPTGPPGPPGLSGPLGQKGSKGS PGALGPRGDTGPPGPPGPPGRPAELLEPLPSSRSGRHRRATEGAPGEQGAPRDYEGLEEV YASLSSLRTEVEQLRRPLGTPESPARVCRELQLCHPHLQDGEYWIDPNQGCSRDAFRVFC NFTAGGETCLFPDKKFEAVRLAAWNREKPGTWYSTFKRGKKVGTWAGADGCLCLSPTQLT FLRLLSASARQNFTLNCQHAAAWYDARAGTFARALRFRGANEEELGHNHPAAPIRALHDG CQERRGQERTVLEVTSSRVERLPLTDVAVLDFGDANQKFGFELGPVCFMG NT seq 5193 nt NT seq  +upstreamnt  +downstreamnt atgcgcacctggctgtgccggattaaccctccccgcgcccgggcgcagccgatgattggg gtccggctccctgcggagagaggggagcaccctcaaccctctccccacgcccccacggtg cccgtggacgtgctgcagaccctgggcatgcaggatggccgggacggcgtctccgtcacc accgggatctgtccgcagcgcccggggaccgaagaccccgatttcgctttccgtgtggac aaccgcacccagctcagtgcacccacccggcagctcttccccgatggctccttccccgag gacttctccatcctggccacggtgcgtgcccggcgcggaggacaagccttcctgctctcc gtctacgacgagcgaggcgtgcagcagctgggcgtggagatcggactctcgcccgtcttc ctctacgaggaccaggaggggcggccggcccctgagcagtaccccgtcttccgcagggtc aacctggccgacggcaggtggcaccgcgtggcgctggccgtggagggcaccaacgtctcc ttgctggtggattgccacctccttgccacgctgccgctggagcggggacctcagcccctc gttagcaccgagggggtgacgattttcggggcccgcctcctggacgaggaggtgttcgag ggtgatgtccagcagctgctgatcgtggccgacccggaggccgcccgctcctactgccag ctctacatgccagactgcgattccgcatcgcccaaggccagcgcgcccacgccgacgccg tccgcggaggagagctccccgccgccggtccccaccagccttgccaccaccgtgagcgtc accctgaatggcaccgaccccttcgaggacactggtgaggagcttgtgcttgaactcgag gaggatggagactctggggctgacagcacggagctgctgggctacgaggactactacgac ggggaccctgcgagccgggagcggtttggccctgctgagcgggaggagacggtgatccga gctcctcaggagcccagtttgaagggagagaagggcgagccagccatcgtggagccgggt cggcgattcgaggggccgccgggacccccaggccctgcgggggaagcaggtcccctggga ccaccggggctcccagggctgcccggggaccccggagatcagggtcccccgggacggccg gggctgccgggagctgacgggatccgcggcccggcggggaccatgatcatgttgccgttc cagtttggtggagactccctcaagggtcccaccgtctctttccaagaagcccaagcccaa gcgatcctgcagcaggcgaagcttgccatgaagggtcccccaggtcccatggggctgact ggccgcccaggacccctgggtctacctggacacccgggcctgaaaggagaggcaggggac atggggccacggggtccccggggaatacagggaccaccggggccgccggggaagctgggc agacggggtcgtgctggagcggacggtgccaggggtctcccgggggaaaccggacccaag ggtgacaggggctttgacgggctgccggggctgccgggtgagaagggccacaggggtgac gtggggaagccaggaccagcaggaccccccggggagaaaggcgccaaaggctccgacggc ctcccgggacctcgagggcagcctggggaacccggtatgcgaggcctgatcggctcacgc ggctcccccggcccccctggaccaccgggggccagcggcatcgatggagcaccggggccc aaaggcaacgtgggaatccagggggagccgggacccccgggacagcaagggaaccccggt ccgcagggtctgcccggcccccagggccctgtcgggctgccaggggagaagggcccgccg gggaagccaggaatacagggtgtggctggggccgacgggcccccgggtcaccccggccga gaagggccagccggagagaagggcctccagggccctgtgggtgcccctgggcccgtcggc tatccgggaccccgtggggtgaagggagcttttggcgtgcggggcctgaagggcagcaaa ggggagaagggagaagatggattccctggctttaaaggggacatgggccccaagggcgag aggggtgaccagggtctgctgggcccccgtggcgaggacggccccgaggggctgaagggg cagacgggtcccatgggggaaccgggcgctcccggccctgcaggcgagaagggcaagctg ggagtgccgggtctcccaggctatcccgggcgccagggccccaagggctccactggcttc cagggtcccatggggctggcaggagagaaaggcaagaggggcaaggccggccaggctggg cagacgggacagcgagggcctccgggcctcccaggggagcgaggtctgcccggtcccacg ggaaaacccggcccgaagggagatcctggccatgacggggcccccggcgcggtgggagag aagggtcctcaaggtccgcagggacccaacggcttcccaggcacgaaaggtccccctggt cccgccgggaagtatggcttgccaggacacccgggacagcgtggcgagccgggctttcat ggcaaaaccggcccccccggcccctcaggggtggtgggaccccagggtaaatcaggcgag acgggacctgtgggagagagggggcacccaggtccccccggcccccccggggaacagggc ctgcccggagctgctggccgagaaggagccaagggtgaccctggccccgctggcatcccc ggtaagagcggccccccaggcatccacggctttcccggcacacggggggcacccggagag atgggtccacctggcttgaagggtggggaaggtccccctggtccccctggacccacgggt tcccccggagagcgaggccccacgggggctgctggaggcattggactgccgggccggggg ggtgcccagggcccccctggtcccgttggcgagaagggctccccgggcgagcggggtccc atgggtccggccgggcatgacgggatccagggccccgtggggctgccggggccgggcgga ccccccggccctgctggagaagacggggacaagggcgagatggggcttcccggacagaag ggcagcaaaggcgacaagggcgaggcgggccccccaggaccgacaggaatccagggaccc atcgggcaccctggccccgcgggagcggacggggagccggggcgccgcgggcagcagggg atgtttgggcagaaaggagatgagggatcgcggggtcaccttggcctcagcggcccccct ggcctgcagggcatgccgggcccaccgggcgagaagggcgagaacggagacgttggcccc atgggtccccccggcgcgccaggaccccgggggccccagggccccagcggtgccgagggc cctcagggaatgccgggtggcgtgggacagccgggtgccgtgggagaaaagggtgaaccg ggcgaagcgggagatcctggagccccaggggagcccggaccacccggtgtgaaaggagat gtgggggagaagggagacgcggggcagccgggagcagctggaccccctggcaagaagggc ccaccaggagaggatggagccaaaggcaacctgggtcccatcggcttccccggtgatccc ggcccccccggagaccccggcgtgccaggtctggacggagctgctggagagaagggtgac agtggggaccccggtctgccggggccgccaggcgcatcaggggagccgggtcccccgggt ccccccggacggaggggacccgtgggaccgatggggcgtgagggccgtcagggtgagaag ggtgccaagggacagcctggcacggacgggccacccgggaagacgggccccgtggggcca caggggccgccgggacggccgggctctgaagggctgcgtgggatccccggccctgctggt gaacaaggcttgctgggggctccgggacaagcgggaccacccggccccctgggtcccgtg ggtttgcctggcctcaagggagaccccggccacaagggagataagggccacgctggactg atcgggctcattgggccgccaggagagatgggggagaaaggagaccaggggctcccgggc atccagggccccccgggacccaaaggagaccctggtctggctggccccactggccccact gggccccccggcccccctgggctctcgggacccttgggccagaagggctccaaaggctca ccgggtgctctgggtccccgaggtgacacaggccctcccggccccccaggaccaccgggc cgcccagccgagctgcttgagccgctgccctcgagccggagcgggaggcaccggcgggca accgaaggggctccgggggagcagggagccccccgggattacgaggggctggaggaggtg tacgcgtcgctcagctccctgcgcaccgaggtggagcagctgaggcggcccctgggcacc cccgagagccccgcgcgggtctgccgggagctgcagctttgccacccgcacctccaggac ggcgagtactggattgaccccaaccagggctgctcccgagacgccttccgcgttttctgt aacttcacagccggcggcgagacctgtcttttccccgataagaagtttgaggctgtccga ctggccgcctggaacagggagaaaccgggaacgtggtacagcaccttcaaaaggggcaag aaggtgggaacgtgggcgggtgcagatgggtgcctgtgtctcagcccgacccaactcact ttcctgcgtctcctgagcgccagcgcccggcagaacttcacgctgaactgccagcacgcg gccgcctggtacgatgcccgtgccggcacctttgcccgtgccctgcgcttccgcggggcc aacgaggaggagctggggcacaatcacccggccgcacccatccgtgccctccacgacggc tgccaggaacgccgcggccaggagcggacggtgctggaggtgacctcgtcccgcgtcgag cggctgcccctgacggacgtggccgtcctcgactttggagacgccaaccagaaattcggc ttcgagctgggccccgtctgcttcatgggctga

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