Nipponia nippon (crested ibis): 104018425
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Entry
104018425 CDS
T05756
Symbol
PARK2
Name
(RefSeq) E3 ubiquitin-protein ligase parkin
KO
K04556
parkin [EC:
2.3.2.31
]
Organism
nni
Nipponia nippon (crested ibis)
Pathway
nni04120
Ubiquitin mediated proteolysis
nni04137
Mitophagy - animal
nni04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
nni00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
104018425 (PARK2)
04120 Ubiquitin mediated proteolysis
104018425 (PARK2)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
104018425 (PARK2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nni04131
]
104018425 (PARK2)
04121 Ubiquitin system [BR:
nni04121
]
104018425 (PARK2)
03029 Mitochondrial biogenesis [BR:
nni03029
]
104018425 (PARK2)
Enzymes [BR:
nni01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
104018425 (PARK2)
Membrane trafficking [BR:
nni04131
]
Autophagy
Mitophagy
PINK1-Parkin associated proteins
104018425 (PARK2)
Aggrephagy
Other aggrephagy associated proteins
104018425 (PARK2)
Xenophagy
Other xenophagy associated proteins
104018425 (PARK2)
Ubiquitin system [BR:
nni04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
104018425 (PARK2)
Mitochondrial biogenesis [BR:
nni03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
104018425 (PARK2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_14
zf-RING_12
ubiquitin
IBR_2
IBR_1
IBR
Rad60-SLD
Dsc3_N
Rad60-SLD_2
Motif
Other DBs
NCBI-GeneID:
104018425
NCBI-ProteinID:
XP_009469834
LinkDB
All DBs
Position
Unknown
AA seq
566 aa
AA seq
DB search
MAGICNIHCSAKQWQHSQPYSNALKESDNFEVVSSCSHSSAHGLNEHIQTPYEEQICQLN
GRKLMSLFARLLWMYKPVAAALKNDMTGAVVIFRAEGGCRQELLFVRFNSSHGFPVEVGS
DASILQLKEAVAQRQGVPADQLRVIFAGRELSNDLTLQNCDLAQQSIVHIVQSPQKNSQN
KDEREDNCAEGILKALEREPESLTRVDLSSSILPSLSAGLAVILDTTKTSISLPSEKSEL
KPSYNSFYVFCKNFCQAVKPGKLRVRCSVCKQGTLTLARGPSCWDDVLIPNRIRGVCQSQ
RCNGNIAEFYFKCGAHPTTDSETSVALNLVTTNSRCITCITCTDIRSPVLVFQCVHRHVI
CLDCFHLYCVTMLNDRQFIHDPELGYSLPCVAGCPDSLIKELHHFRILGEEQYNRYQRYG
AEECVLQMGGVLCPTPGCGAGLLPEPGVRKIVCEPGNGIGCGFVFCRECKEEYHEGECSS
LLSTQGAMAQKGYVVDEHAAMQARWEEASRETIKKTTKPCPSCNIPVEKNGGCMHMKCPR
PQCRFEWCWNCGLEWNRTCMGDHWFD
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atggcaggtatttgcaacattcattgctcagcaaaacaatggcagcattctcagccatat
tcaaatgctcttaaagaatctgacaactttgaagtggtcagttcttgtagtcattcctct
gcccatgggctcaatgagcacattcagactccttatgaagaacagatctgccagctgaat
ggcaggaagcttatgagtttatttgccagacttctctggatgtataaaccagttgctgca
gctctaaaaaatgatatgactggtgcagtagtgattttccgcgctgaaggtggatgccgg
caggagttattgtttgtcaggttcaactccagccatggcttcccggtggaggttggttcg
gatgccagcatcctccagctgaaggaggcggttgcccagcgacagggagttccagctgac
cagctgcgggtgatttttgcagggagggagctcagcaatgacttgacactgcagaactgt
gacctggcccagcaaagtatcgttcatattgttcagagtccacagaagaacagtcagaac
aaggatgaaagagaagataactgtgctgaaggtattctaaaagccttggaaagagaacct
gaaagtctaactcgtgtagatctcagctccagcatcctcccatcactctctgcagggctg
gctgttattctggacactacaaaaaccagcatttctcttccctctgaaaaatcagagtta
aaacctagttacaacagtttttatgttttttgcaaaaatttctgccaagctgtgaaacct
gggaaactgagggtccgctgcagtgtgtgtaaacagggaacactgacattggcaaggggc
ccatcttgctgggatgacgtgctgattcccaacagaataagaggtgtttgccagtcccaa
aggtgcaatggaaacatagcggagttttactttaaatgtggagcacacccaaccactgac
agtgaaacatctgtggctttgaacctcgttacaacaaacagtcgctgtatcacatgtata
acatgcacagatattaggagtcctgtacttgtgttccagtgcgtgcatcgccatgttatt
tgcctagattgtttccatttgtactgtgtgactatgctgaatgaccgtcagttcatccat
gacccggagcttggctattccctcccttgcgtagctggctgtccagactccttgattaaa
gagcttcatcacttcaggattctgggagaagaacagtacaaccgctatcagcgctatggg
gccgaggagtgcgtgctgcagatgggaggagtgctgtgtccaactcccggctgtggagca
ggtttgcttcctgaaccaggagtgaggaaaattgtatgtgaaccaggcaatggaataggc
tgtgggtttgtgttctgccgtgaatgtaaagaagaataccatgaaggggaatgcagctct
ctcctcagcacacagggagccatggcccagaagggatacgtagttgatgaacatgcagcc
atgcaagctcgatgggaagaggcatctagagaaacaatcaagaagacaaccaagccatgc
cccagctgcaatattccagtagaaaaaaatggtggctgcatgcacatgaaatgtcctcgc
cctcagtgcagatttgagtggtgctggaactgtggcctggagtggaacagaacctgcatg
ggagatcactggtttgactag
DBGET
integrated database retrieval system
