Nipponia nippon (crested ibis): 104018515
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Entry
104018515 CDS
T05756
Symbol
SCRIB
Name
(RefSeq) protein scribble homolog
KO
K16175
protein scribble
Organism
nni
Nipponia nippon (crested ibis)
Pathway
nni04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
nni00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
104018515 (SCRIB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
PDZ_6
LRR_14
LRR_8
LRR_4
PDZ_2
LRR_1
LRR_13
LRR_LRWD1
LRR_9
Motif
Other DBs
NCBI-GeneID:
104018515
NCBI-ProteinID:
XP_009469942
LinkDB
All DBs
Position
Unknown
AA seq
1772 aa
AA seq
DB search
MDAQVCPAPFFRLLNLRKLGLSDNEIQRLPPEVANFMQLVELDISRNDIPEIPESIKFCK
SLEIADFSGNPLSRLPEGFTQLRSLGHLALNDVSLQSLPNDIGNLANLVTLELRENLLKT
LPTSLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRLVCL
DVSENKLEQLPNEVSGLVALTDLLLSQNLLECIPDGIGQLKQLSILKVDQNRLTEVTESI
GDCENLSELILTENMLTALPKSLGKLAKLTNLNVDRNRLTSLPAEIGGCANLNVLSLRDN
RLALLPPELANTTELHVLDVAGNRLQNLPFALTNLNLKALWLAENQSQPMLKFQTEDDEK
TGEKVLTCYLLPQQPSPSLENLLQNSVDESWTDTNLNRVSVIQFLDEPKVDDEEESGAER
RGLQRRATPHPSELKVMKKVIEVRRNEVYAAKPDTDLNSPNSEEKRLSAMSNRSEDSHLS
NSTASADFRGEEQGEEGERSWPNGQHKEAADQEEEDVEPTVHFAEDTLIRSEDEDEDEER
PFPVEKQRLIRKDTPHYKKHFKITKLPKPEAVVALLQGLNSDGVPKEEEELGGCNNNTEP
EDQEDAWDEDDRKNGALSAQPSVKGVSFDQANNLLIEPARIEEEELTLTIVRQTGGLGIS
IAGGKGSTPYKGDDEGIFISRVSEEGPAARAGVRVGDKLLEVNGVSLHCAEHHVAVEALR
GSGSSVSMTVLRERMVEPENAITVTPLRPEDDYSPRERRGGLRFPERPEGAPPTERYSTC
LMRNEKGLGFSIAGGKGSTPYRAGDTGIFISRIAEGGAAHRDGILRVGDRVISINGVDMT
EARHDQAVALLTASSPTIVLLVEREGAEQLSEGDSPGVPRVRMHSPPPPPSHGESPPEET
PSLQKNRLSKGLEDQYPIEEIHLVKAGGPLGLSIVGGSDHSSHPFGIHEPGVFISKVIPR
GLASRSGLRVGDRILEVNSIDLRHATHQEAVNALLSNTQELTMLVRRDPPPPGMQEICIE
KAPGEKLGISIRGGAKGHAGNPFDPTDEGIFISKVSSSGAAARDGRLKVGMRILEVNHQS
LLGMTHTEAVQILRSVGDALLVLVCDGFDPKAAAAIEMSPGIIANPFAAGIGRKNSLESI
SSIDRDLSPEELEILQKEMEMVREATQWEREEMEKVNITSEPLRLDYRTLAALPSSGLQR
VNRTLVQYNKASSRMEGDCAMLSLPVAQDSRDSYPETAAGPVIGSVAGLPQDPASPGKCT
SGAEKPQLDNQDPTGCPLSQDQMPKTPEQECMIDSQPILFSENPFVVANRKGKAAGKACL
GGPPLGYGRGGVLKTNLYSKAPAGESGTGNSRRETPYSPSNQQASINFITSQDDSKSQKP
PSPPSPDEIPINVKQAYKTFAAVPLSHPLLETQVATHSPSGLHSPEQRSFRERQKYFEIE
VKQQQMDKPPKRVSLVGEDDLKKMKEEEARKLQQKRTLLLEEEAEEDEMVKQVPEMSMQS
SVIIEGVEYKIERLNGRSIQAPATRTSEVNENSSSQRNSLEEGIKPEQRTNSMSGLSPLY
LGAGDPVAPVRTAKAERRHQERLRMQSPELLSGQEKELSPAERRALEAEKRAMWRAARMK
SLEQDALKAQMVIAKSKEGKKRSTLEQLAESPSPVPTPSPTPLEDCSPRNVTSPGRLSMS
EKKFDYREFAAIPSSKPVYEIQSPDAADDLRYIDDRNNSVPQEQDGQPEEEEMLVTRDSS
TPTSSALEEMALYSSKRKLRHSRRSLEAAVPT
NT seq
5319 nt
NT seq
+upstream
nt +downstream
nt
atggatgctcaggtttgccctgcgcctttctttaggcttctgaacctccgcaagctgggt
ctgagtgacaatgaaatccagagacttccccctgaggttgccaacttcatgcaactggtg
gaactggacatctcccgtaacgacattccggaaattcctgaaagcatcaaattctgcaaa
tccttggaaattgcagacttcagtgggaatcctctctccaggcttccagagggcttcaca
cagcttcggagcctgggccatttggccttgaatgatgtgtccctgcagagcctccccaat
gacattgggaatttggcaaacctggtgactttggagctacgtgagaacctgctaaagact
ctccccacttcgctctccttccttgtcaagttagaacagttggatcttggtggcaatgac
ctggaagtactgccagatactctgggagcactaccaaacctgcgtgagctttggttggac
cggaaccagctctcagccctgcctccagagctgggcaatctccgccgcttggtctgtctg
gatgtgtcagagaacaagctggagcagttgcccaacgaggtcagtgggctagtagcactg
acggacttgctcctgtcacagaacctgttggaatgcattccagatgggattggtcagctg
aagcagctctccatcctcaaggtggaccagaatcggctgacagaggtgacagagtcaatt
ggcgactgtgaaaatctgtcagaactcatcttgacggagaacatgctgacagctttacca
aagtcccttggcaagctggccaagctgacgaacctgaacgtggatcggaaccggctaaca
tcccttccagctgagattggaggctgtgccaatctgaacgtgctgtccttgcgagacaat
cgcctggccctcctgccaccagagcttgccaacacaactgagcttcacgtcctggatgtg
gctgggaacagactgcagaacttgccgtttgctttgacaaatcttaacctgaaagccctg
tggctggcagaaaatcagtcccagcccatgctgaaatttcaaacagaggatgatgaaaag
acaggagaaaaagttctcacttgttacctgcttccccagcagccctctcctagtctagag
aatcttttgcagaacagtgtggatgagagctggacggacaccaatttaaacagagtcagt
gtgattcagttcctggatgaacccaaagtagatgacgaagaggagtctggagctgagaga
cggggcttacagcgcagagcaacccctcatcccagtgaactgaaggttatgaagaaagtg
attgaagttcggcgcaatgaggtatatgctgcaaagcctgacacggacctgaattctcct
aactcagaagagaagaggctgagcgccatgtcaaatcgcagtgaggactcccacctttcc
aacagcactgcctctgctgactttaggggagaggagcagggagaggagggagagaggagc
tggccaaatgggcagcataaggaagctgctgaccaagaggaggaagatgtggaacccact
gtacactttgctgaggacacactaatacggagtgaggatgaggatgaagatgaagagcgg
ccattcccagtggagaaacagaggcttatccgcaaggacacgccccattataagaaacac
tttaagataactaaactgcccaagccagaggcagtggtggcactcctgcaggggctgaac
agtgatggagtccccaaagaggaagaggagttaggaggctgcaataacaacacagagccc
gaagatcaggaggacgcgtgggatgaggatgacagaaagaatggagctttatctgctcag
ccatcagtgaagggggtgtcgtttgatcaagccaataatctgctgattgaacctgctcgc
attgaggaggaagagttgacactgactatcgtgcggcagacgggggggctgggcatcagc
atcgcagggggcaagggctccaccccctataagggtgatgatgagggcatctttatttcc
cgcgtgtcagaagagggtcccgcagctcgtgcaggggttcgtgttggggacaagcttctg
gaggtgaacggcgtgtccctgcactgtgctgagcatcacgtggcagtggaagctctgcgt
ggatcaggaagctccgtctccatgacagttctgcgggaacggatggtggagccggagaac
gccatcactgtcacaccgctgcgccctgaggatgactacagccctcgtgagaggcgaggt
ggtctacgcttcccagagcgacctgagggggcacctcccacagaaagatattccacctgc
cttatgcgcaatgagaagggcctgggcttcagcattgctggtggcaaaggctccacaccc
taccgagccggtgacacgggaatctttatctcacggattgcagagggtggtgcagcccat
cgggacgggatccttcgtgtaggagatcgggtcatctcgatcaatggggtagacatgaca
gaagccaggcatgatcaggcagtagcgctgcttaccgcatcctcccccaccatcgtgctg
ctggtagagagagagggtgcagagcagctcagcgagggagactcaccaggcgtgccacga
gtgcgcatgcactccccaccaccacctcccagccatggggagagcccaccagaggagaca
ccttcgctgcaaaagaaccgtctgtctaaaggcctggaggatcaatatcccattgaggaa
attcaccttgtaaaagcaggtggtcccctgggactcagcatcgtaggaggcagtgaccat
tcaagccatccatttgggattcatgaaccaggtgtcttcatttcaaaggtcattccccgt
ggactggcatctcgcagtgggctgcgtgtaggggacaggatcctggaggtcaatagtatt
gacctgcgccatgccacccaccaagaagcagtgaatgccctgctctccaacacccaggag
ttgaccatgttagtaaggcgagatccgccaccacctggtatgcaggaaatatgcattgaa
aaggctccaggagaaaagctgggcatcagtatccggggtggagcaaaaggtcatgctgga
aatccatttgatcccactgatgaaggcatcttcatttctaaggtgagctcctctggggct
gcagcccgggatggccgtctgaaggtgggaatgcggatcctggaagtgaatcatcagagt
ttgctgggaatgacacatacagaagcagtacagatactccgaagtgtgggtgatgcgctc
ctagtgctagtgtgtgatggctttgatcccaaggctgcagctgccattgagatgtcccca
ggaattattgcaaacccttttgctgctggtattgggcgcaagaatagcctggaaagtatc
tcttctattgaccgggatttaagccctgaagaactggagatcctacagaaggagatggaa
atggtgagagaagcaactcagtgggagagagaagaaatggagaaagtgaatatcaccagt
gagcctttgagactggactatcggaccctggctgctttgcccagcagtggcttacagaga
gtcaatcgcactcttgttcagtataataaggccagctccagaatggagggcgactgcgct
atgctgtctctgccagtggcacaggacagccgagattcatacccagaaacagctgcaggc
ccggtcatcggaagtgtggctggccttcctcaggaccctgcatcacctggcaagtgcacg
agcggggcagaaaagccccagctagacaaccaggatcccacaggttgccccttgtcccag
gaccagatgccaaagacgccagagcaagagtgtatgatcgactctcagccgatcctcttc
agtgagaacccctttgtggtggctaaccgcaaggggaaggcagcaggcaaggcttgcctg
gggggcccgcccctgggctatggcagggggggagtgctgaagaccaacctttactccaag
gctcctgcgggcgagtctgggacaggaaattccaggcgtgaaaccccctattctcctagt
aatcagcaggcttccattaacttcattacatcgcaggatgacagtaaatcacaaaagcca
ccttcaccaccctctcctgatgagatccccatcaatgtcaagcaagcatacaagaccttt
gcagcagtgcctttgtcacaccctctgctcgagacacaggtggccacgcacagccccagc
ggactgcacagccctgagcagagatccttccgggagaggcagaagtatttcgaaattgag
gtgaagcaacagcagatggataagcctcccaagcgtgtctccttggtaggagaggatgac
ctgaagaaaatgaaagaggaggaagctcgaaaactgcagcagaaacgtacccttctgttg
gaggaagaggcagaagaggatgagatggtaaaacaggtgcctgagatgagcatgcagtcc
agtgtcatcattgaaggagttgagtacaagattgagagactaaatggaaggagcatccag
gctccagcaactcggacctctgaggtcaatgagaacagcagctcacagaggaattcactg
gaagagggaatcaagcctgaacaaagaacaaactctatgtctgggttgagtccattatat
cttggagcaggggatccagtggcacctgtgcggacagccaaagctgaacggcggcaccag
gagcgattgcgaatgcagagtcctgagcttctgagtggtcaagagaaggagctttctcca
gcagaacgtcgtgctctggaggcagagaaacgagcaatgtggagggcagcacggatgaaa
tcacttgaacaggatgctcttaaagcccaaatggttattgccaagtccaaggaggggaaa
aaacgcagcacgctggagcagctggcagagtcaccttcacctgttcctaccccatcacca
acaccactggaagattgcagtcccagaaacgtcacttcaccgggaaggctgtccatgtct
gaaaagaagtttgactaccgggaatttgctgctattccttcctccaaacctgtttacgaa
atccagtcacctgatgcagctgatgacctcagatacatagatgacagaaataactcagtt
ccccaggagcaggatgggcagccagaggaagaggaaatgttagtaacacgtgactcatca
acacctacttcatcagcacttgaagaaatggccctgtacagcagcaagcgcaaactccga
cacagccggcgcagtttggaggctgctgtccctacgtag
DBGET
integrated database retrieval system