Nipponia nippon (crested ibis): 104018541
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Entry
104018541 CDS
T05756
Symbol
POLR1A
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
nni
Nipponia nippon (crested ibis)
Pathway
nni03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
nni00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
104018541 (POLR1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nni03021
]
104018541 (POLR1A)
Enzymes [BR:
nni01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
104018541 (POLR1A)
Transcription machinery [BR:
nni03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
104018541 (POLR1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
Pox_C7_F8A
Motif
Other DBs
NCBI-GeneID:
104018541
NCBI-ProteinID:
XP_009469971
LinkDB
All DBs
Position
Unknown
AA seq
1708 aa
AA seq
DB search
MRPLKVVPWRRLVGVSFGMYTAEEIRKLSVKPITNPQYLDNMGNPAINGLYDLALGPPDS
REVCATCMQNFSNCPGHFGHIELPLTVYNPLFFDKLYLLIRGSCLNCHMLTCTRAVVHLL
LSQLKVLEKGLLHAVHDLEVILNRFLEQCADATGSEIEEELNRHVQEILQSHQIRDQCSN
VKNVCECRNKLIAQFWKAHMSSKKCPNCKSRRSLVRKEHNSKLTVTYPSAVYHKPGEEGI
LDEPAAIDESQLGKRGYLTPMTAKEYILALWKNEGFFLRYLFAGMDPHESSGFSPDMFFL
DLLVVPPSRYRPVNRVGDRLFTNGQTVNLQAVMKDAKMIRKLLVFMAKEQCQPIKITEEI
QTVSTGEDNEPLDHSVLTMIPGQTIADKLYNAWIRLQSHVNIVFDSDMDKLMTEKYPGIR
QLLEKKEGLFRKHMMGKRVDFAARSVICPDMYIGTNEIGIPMVFATKLTYPQPVTPWNVK
ELRQAVINGPKVHPGASMVINEDGSRTVLSASSLTQREAIAKQLLTPSSGAPQSGLKIVC
RHIKNGDVLLLNRQPTLHRPSIQAHRARILPGEKVLRLHYANCKAYNADFDGDEMNAHFP
QSELGRAEAYTLAFTDEQYLVPKDGKPLPGLIQDHMISGVSMTIRGCFFTREQYMELVYR
GLTDKKGRIKIFPPAIMKPQRLWTGKQVVSTLLINIVPENHVPLNLTGKAKIGGRAWVKG
PANRCLNLDSMCESQVVIRNGELLCGVLDKAHFGSSAYGLVHCCYEIYGGETSGKVLTCL
GRLFTAYLQLYRGFTMGIEDILVKPEADHKRQKIIEKSKQCGIEAVRAALNLPETASCEE
VQGKWQDAHLCKDQRDFNMVDLKFKEEVNSYNNEVNKVCMPLGLHRRFPENNLQLMVQSG
AKGSTVNTMQISCLLGQIELEGRRPPLMASGKSLPCFQPYDFSPSSGGFVTGRFLTGIKP
SEFFFHCMAGREGLVDTAVKTSRSGYLQRCIIKHLEGLVVQYDLTVRDSDGSVVQFLYGE
DGLDIPKTQFLQPEQFPFIAENYEVIQKTNHLDEALARMESHQANQQFKAIKKWRARHQN
SVQREGGFLMFSQKKMASVKAQIPGGEIKNGRHPATLQLLKMWYELDEKKRRKYLKKTNK
CPDPSLGVWRPDTYFASVSETFENGVENYINKWESENRRSYMRSELSSDRLKDLLYLKWQ
RSLCDPGEAVGLLAAQSIGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILMVASANIKT
PMMSVPVFNTKKALKKVKQLKKQLTRVCLAEVLQKVEIEESLRVKCKQNKHRLYKVKFHF
LPHEYYREEKCVKPREILHFMETRFFKIFLEAIKRKNAKMASFTEVSTRKATRKDLDGEQ
DKTQNNQEAPAEEEENIVDAEADEGDGDATEAKRRKNQEEEVDYESEEENGEENTDENLE
DEEAESEKEERTPSAEDQIGADGDESQHLSFMSQTKKEKDRLLQSAELRVNAVLDSHPSI
QDYTFDTENELWCEVSLTLPLMKVYFDLSSLLVSLARSTVIHEVKGITRCLLNESTNKQG
EKEFVLHTEGINLAELFRYADILDLNRLYSNDIHAMAKNYGIESALRVIIKEIKDVFAVY
GIVVDPRHLSLVADYMCFEGFYKPLNRFGIQSNSSPLQQMTFETSYKFLKEATMMGAHDE
LRSPSACLVVGKVVKGGTGLFDLKQPLT
NT seq
5127 nt
NT seq
+upstream
nt +downstream
nt
atgaggccgctgaaagtggtgccgtggcggcggctggttggggtctccttcgggatgtac
acggccgaggagatcaggaaactgagtgtaaaacccataacaaatcctcagtatttggat
aatatggggaatccagccattaatggactgtacgacttggctttgggacctccagactcc
agagaagtgtgtgcaacttgcatgcagaacttcagcaactgccctggtcattttggccat
atagaactgcctctgactgtctacaaccctctgttttttgataaattataccttctaatt
cgaggttcttgtttaaattgccacatgctgacatgtactcgagctgtggttcacttactg
ctaagtcagctgaaggttctggagaaagggttgcttcatgccgtccatgatcttgaagtc
attctgaacaggtttttagagcaatgtgcagatgcaacaggttcagaaattgaagaagag
ttaaaccgccacgttcaggaaatattacaaagtcatcaaataagagatcagtgttcaaat
gtaaaaaatgtatgcgagtgtagaaataaactgatagcacagttctggaaagcacacatg
agttcaaagaaatgcccaaactgcaaatctaggagatcactagtgcgaaaagaacataac
agcaagctgacagtaacctatccttctgcagtgtaccataagccaggagaggaaggcatt
ctggatgagccagcagctattgatgaaagccagttagggaagagaggatacttgacaccg
atgactgccaaggaatacatcctggctctgtggaagaatgaaggtttctttttgcgttat
ctcttcgctgggatggatccccatgagagttcaggattcagtccagacatgtttttttta
gatctacttgtggttccaccttcaaggtatcgtcccgtaaatcgtgttggagaccgactg
tttacaaatggtcagacggtgaacttgcaggctgtcatgaaagatgccaaaatgatacgg
aagctcttggttttcatggcaaaagaacaatgtcagccaataaaaattacagaagaaatc
caaacagtaagcacgggagaagataatgaacctctggaccattctgtcctgacaatgatt
ccaggacagaccatcgcagataagctgtacaatgcttggattcgtctgcagagccatgtc
aacattgtatttgatagtgacatggacaaactaatgacagaaaaataccctggtattcgt
cagctattagagaaaaaagaaggattgttccgcaagcacatgatgggaaagcgtgtggat
tttgctgctcgatcagtcatttgccccgatatgtacattggtaccaatgagattggcatt
cctatggtatttgctaccaaactgacttaccctcagccagtcactccctggaacgtcaaa
gagctgaggcaggctgtcataaatggcccaaaggttcaccctggggcctccatggtcatc
aacgaagatggatctcgtacagtgttgagtgcaagcagcctgacccagagggaagccata
gctaagcagctcctcactccttcttcaggcgcgccccagtcaggactgaagattgtatgt
cgacatattaaaaatggagatgtccttttactgaaccgccagcccactcttcatagaccc
tccatccaagctcaccgggcccgaatcctgcctggagaaaaagtgctgaggcttcactat
gccaactgcaaggcttacaatgctgattttgatggtgatgaaatgaacgcccattttcca
cagagcgagctgggtagagcagaagcctacaccttagcctttactgatgaacagtacctg
gttccaaaggatgggaagccacttcctggcttgatccaggatcacatgatttctggagtc
agcatgacaatccggggctgctttttcactagagagcaatatatggagcttgtctaccga
ggactaacagacaaaaaaggaagaattaaaatctttcctcctgccattatgaaaccacag
cgattatggacaggaaagcaggttgtttctacattgttaataaacattgttccagaaaac
catgtcccactgaatttgactgggaaagctaagattggtggaagagcctgggtgaaggga
cctgcaaacagatgtctaaatcttgattcaatgtgtgaatctcaggttgttattagaaat
ggggaattactgtgtggagtcttggacaaagctcactttggcagctccgcctatggcctg
gtccactgttgctatgaaatctatgggggtgaaaccagtgggaaagtgctaacatgtcta
ggacggctctttactgcttatctgcagctgtacaggggatttacaatggggattgaggat
attttggttaaacccgaagcagaccacaaaagacaaaaaatcattgaaaagtcaaagcag
tgtggtatagaagctgttagagctgctcttaatttgccagaaacagcatcatgtgaggag
gtccaagggaaatggcaggatgcccatctctgcaaagaccagagggattttaacatggtt
gatctgaaattcaaggaggaagtaaacagttacaacaatgaagttaataaggtttgtatg
ccccttggtctccataggaggtttccagagaacaatttacagttgatggtacagtcagga
gccaaaggatccactgtaaatacaatgcagatttcttgtttgctgggccagattgagttg
gaaggtcgcagacccccattgatggcatctggcaaatcgctgccatgtttccagccttat
gatttttcccctagctcaggaggatttgtgactggcagatttctcactgggatcaaacct
tctgaattcttctttcactgcatggctggcagggaaggtcttgtggatacagctgtcaaa
accagccgttctgggtacctacagagatgtatcataaaacatttggaaggactggtagtt
cagtatgacctgactgtacgagatagtgatggcagcgtggtgcagtttctgtatggagaa
gatgggcttgatatccctaaaactcagttcttgcaacccgagcagttccctttcattgca
gaaaactacgaggtaatccagaagacaaaccatctggatgaagctttagcaaggatggaa
tctcaccaagctaaccagcagttcaaagccatcaaaaagtggcgagccaggcaccaaaac
tctgtgcaaagagaaggaggttttctgatgttttcccaaaagaaaatggcaagtgtaaaa
gcacagattccaggaggagaaataaaaaatggaagacatcctgctactttacagttattg
aagatgtggtatgaactagatgagaagaaacgacgaaagtatctgaagaagacaaataag
tgtcctgacccaagccttggtgtttggcgtccagatacttattttgcatctgtttcagaa
acatttgaaaatggagtcgaaaattatatcaacaaatgggaatctgagaacagacgaagt
tatatgcgctcagagctttcttctgatagattaaaggatttgttgtatttaaaatggcag
cgatccctttgtgacccaggagaagctgtgggtcttcttgcagctcagagtattggggaa
ccttccacgcagatgactctgaacaccttccactttgctggcagaggtgaaatgaatgtc
acattgggtattcccaggttgcgggaaatattgatggtagccagtgcaaatattaaaaca
ccaatgatgagtgttcctgtgttcaataccaagaaagctctcaagaaggtgaaacagctt
aagaaacagctcacaagggtgtgcttagctgaggtcttgcagaaagttgagatagaggaa
tccctgcgtgtgaagtgcaaacagaacaaacatcgcctctacaaagtcaaattccatttc
ttgccccatgaatattaccgagaggagaagtgtgtgaagcccagggagatcttgcacttc
atggaaacaaggttctttaaaatttttctggaagcaattaaaaggaagaatgcaaagatg
gcatcttttactgaagtcagcacccggaaggcaactcggaaagatttagatggtgaacaa
gacaagacacagaataatcaggaagctccagcagaggaagaagagaacatagttgacgca
gaagctgatgaaggggatggcgatgctacagaagcaaaacggaggaagaaccaagaagag
gaggttgattatgagagtgaagaagagaatggggaagaaaacactgatgagaatctagaa
gatgaagaggctgaatcagagaaagaagaaaggactcccagtgcagaagatcagattgga
gcagatggtgatgaatctcaacatctttcctttatgtctcagacaaaaaaagagaaagat
cgattacttcagtcagcagagttgcgagtaaatgctgttctggacagccacccatccata
caggattacacgtttgacaccgaaaatgaactttggtgtgaggtttcattgacgcttcca
ttgatgaaggtgtacttcgacctctcctccttgcttgtctctcttgcacgaagcacagtc
attcatgaagtgaaggggatcacacgatgcttgttgaatgaaagtaccaataagcaagga
gagaaggaatttgttctgcataccgaagggataaaccttgcggagctgttcagatacgct
gatattttggaccttaacagactttattccaatgatattcatgccatggctaagaattat
ggaattgagtctgccctgagggtgattataaaggaaataaaagatgtatttgctgtatat
ggaattgtggtagaccctcggcacctttcacttgtggcagattacatgtgttttgaagga
ttttataaaccgctgaatcgttttggaattcagtccaactcctcccctctgcaacagatg
acatttgaaaccagctacaaattcttgaaggaagcaacgatgatgggtgcccacgatgaa
ctgcgatccccttctgcatgcctggtggttggaaaagttgtgaaaggagggactggtttg
tttgacctcaagcaacccctcacatag
DBGET
integrated database retrieval system
