Nipponia nippon (crested ibis): 104018627
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Entry
104018627 CDS
T05756
Symbol
ALYREF
Name
(RefSeq) THO complex subunit 4
KO
K12881
THO complex subunit 4
Organism
nni
Nipponia nippon (crested ibis)
Pathway
nni03013
Nucleocytoplasmic transport
nni03015
mRNA surveillance pathway
nni03040
Spliceosome
nni05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
nni00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104018627 (ALYREF)
09122 Translation
03013 Nucleocytoplasmic transport
104018627 (ALYREF)
03015 mRNA surveillance pathway
104018627 (ALYREF)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
104018627 (ALYREF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nni03019
]
104018627 (ALYREF)
03041 Spliceosome [BR:
nni03041
]
104018627 (ALYREF)
Messenger RNA biogenesis [BR:
nni03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
104018627 (ALYREF)
TREX complex
104018627 (ALYREF)
Spliceosome [BR:
nni03041
]
Complex C
Other components
EJC/TREX
104018627 (ALYREF)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
104018627 (ALYREF)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FoP_duplication
Motif
Other DBs
NCBI-GeneID:
104018627
NCBI-ProteinID:
XP_009470059
LinkDB
All DBs
Position
Unknown
AA seq
133 aa
AA seq
DB search
MKQYNGVPLDGRPMNIQLVTSQIDTQRRPAQSVNRGGMTRNRGGSGFGGGGGNRRGTRGG
NRGRGRGAGRTSKQQLSAEELDAQLDAYNARVSAAWALSTGSPRHLGLGNVGSPEPAGKR
QRFPGHWTKAVSL
NT seq
402 nt
NT seq
+upstream
nt +downstream
nt
atgaagcagtacaacggagtccccttggacggacgccccatgaacattcagctggtcacg
tcacagatcgacacacagaggagaccggcacagagtgtaaacagaggtggcatgaccaga
aaccgtggtggttcaggatttggtggtggaggaggcaacaggcgaggtactcgtggcggg
aacagagggagaggcagaggagctggaagaacttccaaacagcagctctccgcagaagaa
ctagatgcacagctggatgcttacaatgccagggtaagtgctgcttgggcgctgtccaca
ggctccccgcggcatctcggtctgggaaacgtgggcagcccggagccggcaggaaagaga
cagcgtttcccaggtcattggactaaagcggtctccctctaa
DBGET
integrated database retrieval system