Nipponia nippon (crested ibis): 104019132 Help Entry 104019132         CDS       T05756                                  Symbol SYNPO2 Name (RefSeq) synaptopodin-2   KO K24066   synaptopodin-2 Organism nni  Nipponia nippon (crested ibis) Pathway nni04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:nni00001]  09140 Cellular Processes   09142 Cell motility    04820 Cytoskeleton in muscle cells     104019132 (SYNPO2)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04990 Domain-containing proteins not elsewhere classified [BR:nni04990]     104019132 (SYNPO2) Domain-containing proteins not elsewhere classified [BR:nni04990]  PDZ domain-containing proteins   Other PDZ domain-containing proteins    104019132 (SYNPO2) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  PDZ PDZ_6 Calsarcin PDZ_2 Motif Other DBs NCBI-GeneID:  104019132 NCBI-ProteinID:  XP_009470636 LinkDB All DBs Position Unknown AA seq 1266 aa AA seqDB search MGTGDYLSIAMSGGAPWGFRLQGGKEQKQPLQIAKVRSKSKAAKAGLCEGDEVVSINGKP CGDLTYAEVIVLMESLTDVLQMLIKRSSNGINETLSAERENGKHDNITNEDYRESTTLQI NTAKDVPHGDLCITEIYTETHQGAEESNIHFSEMKQEITQSHRITPKVIGTSKVLVTDEA AFRGKTEERRPGTMVELQLSLSNDSHKGTNAPSVTLLGAEKCTPSGRGPSVQQDGTSPVI AIPLGMKEGNVQWSSKVVQFSSGKEVKRIQGAAPSLPRVEVILDCSDREKEAPRSLAERG CVESQVEGGQSEAPPSLLSFAISSEGTEQGEDDQHLERDHKPLKHRARHARLRRSESLSE KQVKEAKSKCKSIALLLTAAPNPNSKGVLMFKKRRQRARKYTLVSYGTGELERDEDEGEE GEGEEGDKENTFEVSLLATSESEIDEDFFSDTDNDGKIVTFDWDSGLPEVEKKTKSGDEM QTLPESTGKGALMFAKRRQRMDQITAEQEEMKARTVHTEERREATMSENFQKVSSSVYQT KEEETSRQQTCVSKSYTDMSQSHSKMIQQNGFGLAPDTNLSFQSSEAQKAASLNKTAKPF PSGVQNRAAAPFSPTRNVTSPLSDIPAPPPYCSISPPPEALYRPVSAPAASRAAPAVWSP TEPTEHIASRDERIAVPAKRTGILQEAKRRSTSKPMFTFKETPKVSPNPALLSLVHNAEG KKGTGAGFESGPEEDYLSLGAEACNFMQTQASKQKAPPPVAPKPSLKVSPTAGTPVSPVW SPAAMASNKAPSFPAPASPQAAYPAPLKSPQYPHSPAHPPSTLNLAGPFKGPQATLASPN HTPKTTPVTPSAGGTKPPFEMPPAMSGKGAQLFARRHSRMEKYVVDSETVQANMARASSP TPSLPASWKYSSNVRAPPPVAYNPIHSPSYPPAATKPSSKSAAATKNTKRKPKKGLNALD IMKHQPYQLDASLFTFQPPSTKESFANKQTSKLSTSKHALPLRPPSAGSPTNVRASSVYS VPAYSSQPSFQSNASIPVNESYSPTGYSTFSKPETTTSSLFTAPRPKFSAKKAGVTAQER SSGRSLSLPGRPSSYISRAVSPTSPLIFQPVPDYFSKPDAAADRPGKRLTPWEAAARSPL GLVDEAFGPQNMQESIAANVVSAARRKTLPEPPDEWKQKVSYEPPAPSGSVALLGGKQSR NVSPPKSSLSAPSATTQAGSQLRYAYCSQRSRTDPDIMSMDSRSDYCLSTADSNYNPQPR GWRRPT NT seq 3801 nt NT seq  +upstreamnt  +downstreamnt atgggcacaggggattatctcagcattgctatgagcggaggggcgccttggggctttaga ttgcaaggtggcaaggagcaaaagcagcctttgcaaatcgccaaggttcgcagcaagagc aaagcagctaaggctggactgtgtgagggagatgaggtggtgtctatcaatggcaagcct tgtggagacttaacctatgctgaagttattgttctaatggaaagcctgactgacgtcctg cagatgcttatcaagagatcctccaatggaataaatgaaaccttgagtgctgaaagagaa aatggaaagcacgataacataacaaatgaggactatagggagagtactacactgcaaatt aacacagcgaaagacgtaccccatggagatttatgcatcacagagatatacactgagact caccagggagcagaagaaagcaacatacacttttctgaaatgaaacaagagatcacacaa agccacagaattactcctaaagtgataggcacctccaaagtgctcgtgacagatgaggct gctttcagagggaagacagaagaaagaaggccaggtactatggtggagctgcagttgtcc ctctcaaatgactcgcacaagggcaccaatgctccttctgtgactctcttaggggcagaa aaatgcaccccttcaggaagaggacccagtgtacagcaagacgggactagccctgtgatc gcaattcccctgggcatgaaagagggcaacgtccagtggtcaagcaaagtagtccagttt tctagtggcaaagaggtcaagaggatccaaggggcagctccatctctccccagggtggag gtgatcctagactgttccgacagggagaaggaagcacccaggtctctagctgaaaggggg tgtgttgaatctcaagtggaaggagggcagtcagaagcacctccttccctcctctccttt gcaatctcatcagaaggcacagagcagggagaagacgaccagcacttggaaagggatcac aaacctctcaagcacagggcgaggcacgcaaggctccggcgaagtgagagtctgtcagag aagcaggtcaaagaagccaaatctaaatgtaaaagtattgcattgctgctgacagcagct cccaatcccaattccaagggggtgttgatgttcaagaagcgtcgtcaaagggcgaggaaa tatactttagttagctacggtactggggagttagaacgtgacgaagacgagggtgaagaa ggtgaaggtgaagagggggacaaagaaaacacttttgaagtgagtttacttgcaacaagc gagtcagaaatagatgaagatttcttctctgacactgacaacgacggtaagattgtgacg tttgactgggacagtggtctacctgaggttgaaaagaagacaaaaagtggagacgagatg cagacgcttccagagagcacaggtaaaggggccctcatgtttgccaagagacggcagagg atggatcagattacagctgagcaggaggagatgaaggcacgcacagtgcatacagaggaa cgaagggaagccaccatgtcagagaacttccagaaagtaagctcttcagtctatcaaaca aaagaggaagaaacgtcaagacagcagacctgtgtgagcaaaagctacacagacatgagc cagagtcatagcaaaatgatacaacaaaatggctttggcttagcaccagacacaaacctc tcttttcagtcctctgaagctcaaaaagcagcgtccttgaataaaacagctaaacccttc ccttctggggttcaaaaccgagcagctgcaccattttcacccacaagaaatgtcactagt cctctttcagatataccagcaccacctccttactgctctattagcccaccgcccgaggct ttatacagacctgtttcagctcccgcagccagcagagctgccccagctgtgtggtcaccc accgagccaacagaacacatagcatcccgagatgaaaggattgcagtgccagccaaaaga actgggatactgcaagaggcaaagagaagaagcacttcaaaacctatgttcactttcaaa gaaacacccaaagtaagtcctaatcctgccctgttgtcccttgtacacaatgcagagggc aaaaaaggtactggagctggttttgagtcaggacctgaagaagactacctcagtctggga gcagaagcttgcaatttcatgcagactcaagcatctaaacaaaaggcccctcctcctgtt gctccaaagccttcactcaaggtctctcctactgctggtactccagtttcaccagtttgg tcgcctgcagccatggcttctaacaaggctccttctttcccagcaccagcctcacctcag gcagcatatcccgcaccactcaaatctccacagtatcctcattctcctgcccacccccca agtactctcaacctagctggtcctttcaaagggcctcaggcaaccctagcgagtccaaac catacgcccaagacgacaccagtcacaccaagtgctggaggaacaaagccaccctttgag atgccaccggctatgagtggaaaaggagcacagttatttgccagaaggcactctcgaatg gagaagtatgtggtagattcagagactgtgcaggcaaacatggcacgagcctcatctcca actccatctttaccagcttcttggaaatattcatctaatgtccgagcacctccacctgtt gcttataatcccatccactccccatcttatcctcctgctgctaccaagccctcctctaag tccgctgctgctaccaaaaatacaaagagaaaacctaagaaaggtctcaatgctttggat attatgaaacatcaaccttatcaactcgatgcatctttatttacttttcaacctcctagt acaaaggaaagctttgctaataagcagacatcgaagttgtccacttcaaagcacgctcta cctttaagaccacctagtgctggctctcctactaacgtccgggcatcttcagtgtactcc gtgccagcctacagttcacaaccttcgttccagtcaaatgcctctatcccagtaaatgaa tcatattcacctacaggttactctacattttctaagccagaaaccaccacgtcttctttg tttactgctccgaggccaaaattttcagcaaagaaagctggcgtcactgcacaggaaaga agcagtggacgctcactatcacttcctgggagaccttcttcatacatttctcgagccgtg tctcctacttctcctcttatatttcagcctgtccctgattacttcagcaagccagacgca gcagccgacaggcctggcaagagactgactccctgggaagcagcagcaagatcccctctt ggcctagtggatgaagcttttgggccccaaaacatgcaggaatctattgctgctaatgta gtgtcagctgctcgcaggaaaacacttcctgagccgccagatgaatggaaacaaaaagtt tcttatgagcctccagccccaagtggtagtgtagccttattaggagggaagcaatcgcgt aatgtatcaccccccaaaagctccctgtctgccccaagtgccaccacgcaggctggctct cagctgcggtatgcttactgcagtcaacggtccagaacagatcctgatataatgtccatg gattccaggtctgactattgtttgtcaacagctgattcaaactacaatccacagccaagg ggatggaggcgtccaacatga

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