Nipponia nippon (crested ibis): 104019228
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Entry
104019228 CDS
T05756
Symbol
TNPO1
Name
(RefSeq) transportin-1
KO
K18752
transportin-1
Organism
nni
Nipponia nippon (crested ibis)
Pathway
nni03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
nni00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104019228 (TNPO1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nni03019
]
104019228 (TNPO1)
03009 Ribosome biogenesis [BR:
nni03009
]
104019228 (TNPO1)
Messenger RNA biogenesis [BR:
nni03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
104019228 (TNPO1)
Ribosome biogenesis [BR:
nni03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
104019228 (TNPO1)
Pre-60S particles
104019228 (TNPO1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HEAT_EZ
HEAT
HEAT_GCN1
TPR_IMB1
HEAT_2
Arm
Cnd1
TOR1L1_N
Vac14_Fab1_bd
IBN_N
TPR_IPO5
HEAT_EF3_N
HEAT_MROH2B_C
TPR_DNAAF5
PDS5
Adaptin_N
HEAT_GCN1_C
MMS19_C
INTS7_N
CandA_N
Dopey_N
ARM_TBCD
TPR_TTI1_C
PIK3R4-like_middle
RTP1_C1
Motif
Other DBs
NCBI-GeneID:
104019228
NCBI-ProteinID:
XP_009470730
LinkDB
All DBs
Position
Unknown
AA seq
922 aa
AA seq
DB search
MSGLATPPVFPGIGESLTGGRILKAKECNALRVYTANEVLDTPLGMETLIKQISSPYQAQ
GNFSLQKLEQLNQYPDFNNYLIFVLTKLKSEDEPTRSLSGLILKNNVKAHFHNFPNGVTD
FIKSECLNNIGDSSPLIRATVGILITTIASKGELQNWPELLPKLCSLLDSEDYNTCEMAF
GALQKICEDSAEILDSDVLDRPLNIMIPKFLQFFKHSSPKIRSHAVACVNQFIISRTQAL
MLHIDSFIENLFALAGDEEPEVRKNVCRALVMLLEVRMDRLLPHMISIVEYMLQRTQDQD
ENVALEACEFWLTLAEQPICKDVLCRHLTKLIPVLVNGMKYSEIDIILLKGDVEEDEAIP
DSEQDIRPRFHRSRTVAQQHEEDGIEDDDDDDDDLDDDDDTISDWNLRKCSAAALDVLAN
VFRDELLPHILPRLKELLFHPEWVVKESGILVLGAIAEGCMQGMIPYLPELIPHLIQCLS
DKKALVRSITCWTLSRYAHWVVSQPPDTYLKPLMTELLKRILDSNKRVQEAACSAFATLE
EEACTELVPYLAYILDTLVFAFSKYQHKNLLILYDAIGTLADSVGHHLNKPEYIQMLMPP
LIQKWNMLKDEDKDLFPLLECLSSVATALQSGFLPYCEPVYQRCVNLVQKTLAQAMLHNA
QPDQYEAPDKDFMIVALDLLSGLAEGLGGNIEQLVARSNILTLMYQCMQDKMPEVRQSSF
ALLGDLTKACFQHVKPCIADFMPILGTNLNPEFISVCNNATWAIGEISIQMGIEMQPYIP
MVLHQLVEIINRPNTPKTLLENTAITIGRLGYVCPQEVAPMLQQFIRPWCTSLRNIRDNE
EKDSAFRGICTMISVNPSGVVQDFIFFCDAVASWISPKDDLRDMFCKILHGFKNQVGDEN
WRRFSDQFPLPLKERLAAYYGV
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
atgtctggccttgcaacaccaccagtgtttcctggaatcggtgaaagcttaacaggaggg
cgaattttaaaagcaaaagaatgcaatgcacttagggtatatactgcaaatgaagtcctc
gatactcccttgggaatggagaccctaatcaaacagatctctagtccataccaagcacaa
ggaaatttctctcttcagaaactagaacaactcaatcagtatccagatttcaacaattac
ctgatttttgttcttacgaagttgaagtctgaagatgaacctacacgttccttgagtggt
ctcatcttgaagaataatgtgaaagcacattttcacaactttcccaatggggtaactgac
ttcattaaaagtgaatgtctgaacaacatcggtgattcctcccccttaattagagctact
gtaggcattctgataacaaccattgcctcaaaaggggaattacagaattggcctgaactc
ttaccaaagctttgcagcttgttggattctgaagattacaatacctgtgagatggcattt
ggcgctcttcagaaaatatgtgaagattctgctgaaattctagatagcgatgtattggac
cgaccactcaatatcatgattcctaaattcttgcagttcttcaagcacagcagtccaaaa
ataaggtctcatgctgttgcatgcgtcaatcaatttatcatcagcagaactcaagctctt
atgttgcacatagattcttttattgagaatctttttgcactggctggtgatgaggagcct
gaagtacgcaaaaatgtttgccgtgctctggtgatgttgctggaagttcgaatggatcgc
ctccttcctcatatgattagtatagttgagtacatgcttcagaggacccaggaccaagat
gaaaatgtggctttggaggcttgtgagttttggctgaccttggctgaacagccaatttgt
aaagatgtattatgtcggcatcttactaagctgatacctgtgctggtaaatggtatgaaa
tattcagagattgatattattctgttgaagggggatgttgaagaagacgaagctattcca
gatagtgaacaggacataagacctcgttttcatcgttcacggacagtagctcagcaacat
gaagaagatggtattgaagatgatgacgatgatgatgatgatcttgatgatgatgatgat
actatttctgactggaatttaaggaaatgttctgctgctgctctagatgtcctagccaat
gtatttcgcgatgaacttctgccacacatcttgccccgtttgaaggaattgctcttccat
cccgaatgggtagttaaagaatctggtatccttgttcttggagcaattgctgaaggctgc
atgcagggtatgattccatatcttcctgagctgatccctcaccttattcagtgcctctct
gacaaaaaggctcttgtgcgctccattacatgctggactcttagtcgctatgcacactgg
gtagttagtcaacccccagacacatacttgaagccattaatgactgagttgctaaagcgt
atcctggatagcaacaagagagtacaagaagctgcctgcagtgcctttgctactctagaa
gaggaggcttgtacagagcttgttccttatcttgcgtatatacttgacactttggtcttc
gcatttagtaaataccagcataaaaacctgctcattctttatgatgctataggaactctg
gcagattccgtaggtcatcatctaaataaaccagaatatattcagatgctaatgcctcca
ttaatccagaagtggaacatgttgaaggatgaagacaaagatctcttccctttattagag
tgcctgtcgtcagttgctactgccttgcaatctggctttcttccatactgtgaacctgtg
taccagcgctgtgtaaatctggtgcagaagacccttgcacaagccatgttgcataatgct
cagccagaccaatatgaggctccagataaagatttcatgattgtggctcttgatttactc
agtggtttagctgaaggacttggaggcaacattgaacagctagtggctcgcagcaatatc
ctgacactaatgtaccaatgcatgcaggataaaatgcctgaggtacggcagagttctttt
gcgttattaggtgatctcacaaaggcgtgttttcagcatgttaagccttgcatcgctgat
ttcatgcccattttgggaaccaacctaaaccccgaattcatttctgtgtgtaacaatgcc
acctgggcgattggagaaatctccatccagatgggtatagagatgcagccttatattcca
atggtgttgcaccagcttgtagaaataattaacagacccaacacaccaaagacgttgtta
gagaacacagcaataacaattggtcgtcttggttacgtttgtcctcaagaggtggccccc
atgctacagcagtttataagaccctggtgcacctctctgcgaaacataagagacaatgag
gaaaaggattcagcgttccgtgggatatgtaccatgatctcggtcaaccccagtggagta
gttcaagactttatttttttttgtgatgctgttgcgtcgtggattagcccaaaagatgat
ctccgggacatgttctgtaagattcttcatggatttaaaaatcaagttggggatgagaat
tggaggcgtttctctgaccagtttcctcttcccttaaaagagcgccttgcagcttactat
ggagtttaa
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integrated database retrieval system
