KEGG   Nipponia nippon (crested ibis): 104019435
Entry
104019435         CDS       T05756                                 
Symbol
WDHD1
Name
(RefSeq) LOW QUALITY PROTEIN: WD repeat and HMG-box DNA-binding protein 1
  KO
K11274  chromosome transmission fidelity protein 4
Organism
nni  Nipponia nippon (crested ibis)
Brite
KEGG Orthology (KO) [BR:nni00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:nni03036]
    104019435 (WDHD1)
Chromosome and associated proteins [BR:nni03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   Other sister chromatid cohesion factors
    104019435 (WDHD1)
SSDB
Motif
Pfam: WD40_WDHD1_1st Mcl1_mid Ctf4_C WD40 HMG_WDHD1 WD40_Prp19 WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 WDR55 WD40_MABP1-WDR62_2nd Beta-prop_RIG_2nd Beta-prop_WDR90_POC16_2nd EIF3I ANAPC4_WD40 HMG_box Beta-prop_IFT140_1st Beta-prop_Vps41 Beta-prop_WDR19_1st Beta-prop_WDR35_TULP_N Beta-prop_TEP1_2nd Beta-prop_EML eIF2A WDR90_beta-prop_4th Beta-prop_HPS5 Beta-prop_Nup120_160 Beta-prop_WDR75_1st Beta-prop_WDR75_2nd Beta-prop_IFT122_1st NBCH_WD40 HMG_box_2 Beta-prop_SCAP
Other DBs
NCBI-GeneID: 104019435
NCBI-ProteinID: XP_009470967
LinkDB
Position
Unknown
AA seq 1125 aa
MPSAQKPMRYGHTEGHTDVCFDDAGSCIVTCGSDGDVRIWENLDDDDPKSINVGEKAYSC
ALKNGRLITAVSNNTVQIHTFPEGAPDGILTRFTMNANHVVFNSDGTKIAAGSSDFMVKV
VEVTDSSKQKTFRGHDAPVLSLSFDPRDVYLASASCDGSVRVWKIADQTCTTSWPLLQKC
NDVINAKSICRLGWQPGSGKLLAIPVDKVVKLYRRETWESQFDLSDTFITQPLNVVAWSP
CGQYLAAGSVDGSMVVWNMETQQCIERMKHEKNYSICGLAWHPKYRQIAYTDTEGNLGLL
ENIGDGKKANDKVASTVTKDYNDLFDGEDDDYLNGDMIEPQSSPKAGANEDDGGDDDDDL
MPTSGHLRRAIIDDDDNSLDIGMIKANSNLLEKEDDDDGQTGGFPALPPSSTQQPFYDGP
MPTPKQKPFQSGSTPAHLMHRFMVWNSVGIIRCYNDEQDNAIDIEFHDTSIHHATHLPNS
LNHTMADLSTEAILLACESTEELASKLHCIHFSSWDANKEWTVDMPKDEDIEAICLGQGW
AACATSALLVRVFTVGGVQKEIFSLPGPVVSMAGHGEQLMIIYHRGTGFDGDQCLGVQLM
ELGKKKKQILHGDPLSLTKKSYLVWVGFSAEGTPCYVDSEGIVRMLNRGLGNTWIPVCNT
REHCKGKSDHYWVVGIHENPQQLRCIPCKGARFPPTLPRPAVAILSFKLPYCQVTTEKGQ
MEEQYWRSVVFHNHVDYLSKNGYELDENTKTQSVKEQQELLMKLFALSCKLEREFRCVEL
ADLMTQNVVNLAIKYASRSRKLNLAQRLSEMAVEKASELATAPEDEEEEEDFRKHLSAGY
SNSATEWSRLPVRNVQHDTTKXEAEETDAYEEAEETPEVHKQRPNPFSKGVTSAEVTTPK
SVLIASSGQGRVNPFKVSSNKKDPVVPSANVLDTMSKYSKKTTLSSSRAVNKQNPPVIKP
LIPKPKSKQALAASFFQARTPNSSEKTVEEREEKAGSESHEVKVTAQENTENKRPKTGFQ
MWLEENRANILTGNPDLNEAEVIKEGMSRFRMLSSEERMVWTEKAKGGMVNDITEDKKRK
RPTADEDEAKKNQEQKSEDSNLSKKPKPLDQSTNVRLSAFAFKQS
NT seq 3378 nt   +upstreamnt  +downstreamnt
atgccttccgcgcaaaagccgatgcggtacggccacaccgagggccacacggacgtctgc
ttcgatgacgctgggagctgcattgtaacttgtggcagtgatggagatgttaggatttgg
gaaaacctggatgatgatgatccgaagtccattaatgtgggagaaaaggcctattcatgc
gctctaaagaatggaagactgatcacagcagtatcgaacaacactgttcagatccataca
tttcctgaaggagctccagatggcatccttactcgtttcaccatgaatgcaaaccacgtt
gtctttaatagtgacggtaccaaaattgctgctggatctagtgactttatggtcaaagtt
gtggaggtgaccgatagcagcaagcagaaaacattccgaggacatgatgctcctgtttta
agcctgtcttttgaccccagggatgtctacctggcatcggcgagctgtgatggttctgtc
agagtatggaaaatcgcagatcagacatgcacaacaagctggccgctgctgcagaaatgt
aatgatgtgataaatgctaaatcaatatgcaggcttggctggcaacctggcagtgggaag
ttgctggcaattcctgtagataaagttgttaaactatatagaagagaaacctgggagagt
caatttgatctatcagatacattcatcacacagcccttgaatgttgtggcttggtctcct
tgtgggcagtatctggcagctggaagtgtggacgggagtatggtggtgtggaatatggaa
acccagcagtgcatagagaggatgaagcacgagaaaaattactcaatttgtggactggcg
tggcaccccaaatataggcaaattgcttatacagatactgaaggaaatctgggcttgttg
gaaaatatcggtgacggaaagaaagcaaatgacaaggttgccagtacagtgacaaaagac
tacaatgatctctttgatggagaagacgacgactatttaaatggagatatgattgaacca
cagtcttccccaaaggctggagctaatgaagatgatggtggtgatgatgatgatgacctt
atgccaacttcaggccatctcaggcgggcaataattgatgatgatgataactcactagat
attgggatgataaaagctaattccaatctccttgaaaaggaagatgacgatgatggtcag
actggtggctttccagctttgccaccatcgtctacacaacagcctttctatgatgggcca
atgccgacccccaagcaaaagccgttccagtctggctccactcctgcacatctcatgcat
cgtttcatggtatggaattctgttggtatcattcgctgttacaatgatgagcaagacaat
gctatagatatagaatttcatgatacctccatacatcacgcaacacacctgccaaactct
ctgaatcacacgatggctgacctctctactgaagctattttactagcctgcgagagtaca
gaggaacttgcaagcaagctccactgcattcattttagctcatgggatgcaaacaaggag
tggacggtagatatgccaaaggatgaagacattgaggctatctgtctaggtcaaggctgg
gctgcttgtgccactagtgccttgctagttcgtgtgtttacggttggaggagttcagaag
gagatcttcagcctcccaggtcccgtggtgtctatggcaggacatggagagcagttgatg
attatttatcacagaggtacggggtttgatggggaccaatgcctcggagtacagctgatg
gagctaggaaaaaagaaaaaacaaattttgcacggagaccctctttctcttacaaagaaa
tcctacttggtatgggttggattttccgcagaaggtaccccttgttacgtggattctgag
ggaattgtgcggatgttgaatcgaggacttgggaatacttggattccagtgtgtaacacg
agagagcattgcaaaggaaaatctgatcattactgggtagttggcatccatgaaaatccc
cagcagctcaggtgtattccttgtaaaggagcccgattccctcctacgctaccacggcct
gctgtagcaatattatcttttaaacttccttactgtcaagttacaacagaaaagggacag
atggaggaacaatactggcgttctgttgtatttcacaaccatgtggattacttatcaaaa
aatggctatgaacttgatgaaaatactaaaactcagtcagtgaaagaacagcaagaactt
ttaatgaaactgtttgctctttcttgtaaactggagcgtgaatttcgttgtgtggaactt
gctgacctcatgacacaaaacgtcgtgaatttagctatcaagtatgcttctcgctctcga
aaactaaatttagctcagcgacttagtgaaatggctgtagagaaagcaagtgagttggca
acagcaccggaggatgaagaggaggaagaggatttccgaaagcatttgagtgctggttac
agcaactctgccacggagtggagtcggctgccggtcagaaatgttcagcatgacaccacg
aaataagaggccgaggaaactgatgcctatgaggaagcagaagaaacaccagaagtgcat
aaacagaggccaaatcctttctccaaaggtgtcacttcagcagaggtgactactccgaag
tctgttctaattgcatcaagcggccaaggacgagtgaatccctttaaggtgtcgtctaac
aaaaaggacccagtggtcccctcagcaaatgttctagacactatgagcaaatactcaaag
aaaactactttgtctagcagtcgagctgtaaacaagcagaaccctccagttataaagcct
ctgattcccaaacccaagtccaagcaggctttagcagcctccttcttccaggctcgcaca
cctaactctagtgaaaaaacagtggaagaaagagaagaaaaagcaggaagcgagtcccat
gaagtcaaagtcactgcacaggagaacactgaaaacaaaagaccaaagacgggattccag
atgtggctagaagagaacagagcaaacattttgacgggtaatcctgatctgaatgaagca
gaagtaataaaagaaggcatgagtcgatttagaatgctgtcgtcagaagaaagaatggtg
tggaccgagaaagcaaaaggaggaatggttaatgatataacagaagataaaaagcgaaag
cgtcccacagctgatgaagatgaagcaaaaaagaaccaggagcaaaaatcagaggactcg
aatttatccaaaaaaccaaagcctttagatcaatctacaaatgtcagattgtcagctttt
gcgttcaagcagagctaa

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