Nipponia nippon (crested ibis): 104019688
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Entry
104019688 CDS
T05756
Symbol
DDX55
Name
(RefSeq) ATP-dependent RNA helicase DDX55
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
nni
Nipponia nippon (crested ibis)
Brite
KEGG Orthology (KO) [BR:
nni00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
nni03009
]
104019688 (DDX55)
Enzymes [BR:
nni01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
104019688 (DDX55)
Ribosome biogenesis [BR:
nni03009
]
Eukaryotic type
Pre-60S particles
Helicases
104019688 (DDX55)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF4217
ResIII
Helicase_C_2
SBF_like
AAA_22
SurA_N_3
Motif
Other DBs
NCBI-GeneID:
104019688
NCBI-ProteinID:
XP_009471270
LinkDB
All DBs
Position
Unknown
AA seq
566 aa
AA seq
DB search
MTPVQSATIPLFMNNKDVAAEAVTGSGKTLAFVIPILEILLRREEKLKKMQVGAIIITPT
RELAVQIDEVLSRFTKHFPRFSQILLIGGRNPMEDVEKFKEHGGNIIVATPGRLEDLFRR
KADGLDLASCVKSLDVLVLDEADRLLDMGFEASLNAILDFLPKQRRTGLFSATQTQEVEN
LVRAGLRNPVRISVKEKGVAASNTQKTPTRLENYYMICKADEKFNQLVHFLRQHKQEKHL
VFFSTCACVEYYGKALESLIKQVKIMSIHGKMKHKRNKIFTEFRKLPGGILVCTDVMARG
IDIPEVHWVLQYDPPSSASAFVHRCGRTARIGNVGSALVFLLPMEESYINFLSINQKCPM
QEMKPQTNVLDLLPKLQSMALADRAVFEKGMKAFVSYVQAYAKHECNLIFRIKDLDFASL
AKGFALLKMPKMPELRGKCFPDFTPVTVNTDSISFKDKNREKQRQKQLEQQRKERQENGG
KKKFIKNKAWSKQKAKREKKKKITAKRKREEGSDIEDEDMEELLNDTRLLKRLKKGKISE
EEFEKRLTGSQSRLKAETVADLESEG
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atgaccccggtgcagtctgcaactattccgctcttcatgaataacaaagatgttgctgca
gaagcggtaacaggcagtggcaaaaccttagcatttgtaatccccatactggaaattctt
ctcagacgggaagaaaaattaaagaaaatgcaggttggagctataattatcacaccaacg
agagaattagctgttcaaattgatgaggtgctatcgcgtttcacaaaacacttccccagg
tttagtcagattcttttaattggtggcaggaatcccatggaagatgttgaaaaatttaaa
gaacacggtgggaacatcattgtagctacaccaggccgcctggaggatctgttcagaaga
aaagcggatgggctggatctagcaagttgtgtgaagtctcttgatgtgttggtattagat
gaagcagacagacttctagatatgggctttgaagcaagtttaaatgccattctggacttc
ttgcccaagcagagacggacaggtctgttctcagcaactcagactcaggaggtggagaac
ctggtgagagcaggtctccggaatcctgtccgcatctcggtgaaagagaagggagtggca
gcaagcaacacacagaaaactccgacgcgcctggagaactattacatgatctgcaaagca
gatgaaaaatttaatcagttggtgcattttcttcgacagcacaaacaggaaaaacatctg
gtctttttcagcacgtgtgcctgtgtggaatactatgggaaggctttggaatccttaatc
aaacaagtgaaaataatgagcattcacgggaaaatgaaacacaagcgtaacaagattttt
actgagtttcggaagctcccaggtggcattttagtttgcaccgacgtgatggcccgtggc
atagacattccagaagtacactgggttttacagtacgacccacctagcagcgcaagtgcc
tttgtgcatcgctgcggtcgcacggcacggattggcaacgtaggcagcgcgcttgtattt
ttgcttcccatggaagaatcttacattaactttctctcaatcaaccagaagtgtcccatg
caggagatgaaaccacagacaaacgtgttggatcttcttccaaaactgcagtctatggcc
ctagctgacagggcggtgtttgagaaagggatgaaagcatttgtgtcctacgtccaggct
tacgccaaacacgaatgtaatctgatcttccgaataaaagatctggattttgctagcctt
gccaaaggctttgcattgttaaaaatgccaaagatgcctgaactaagaggaaaatgtttt
ccggactttactccagtcactgttaatacagactccatttcatttaaggataaaaataga
gaaaaacagaggcaaaagcaattagaacaacaaagaaaagaaagacaggaaaatggaggg
aaaaagaaattcataaagaacaaagcctggtcaaagcagaaagccaagagggagaagaag
aagaaaataacagctaaaaggaagcgtgaagagggctctgatattgaagatgaggatatg
gaagagttgctgaatgacacaagactcttgaagagattaaaaaaaggaaaaattagtgaa
gaagagtttgagaagagactaacaggcagccagagtagactcaaagcagaaactgttgct
gacttagagtctgaaggttga
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