Nipponia nippon (crested ibis): 104019885
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Entry
104019885 CDS
T05756
Symbol
DDX23
Name
(RefSeq) probable ATP-dependent RNA helicase DDX23
KO
K12858
ATP-dependent RNA helicase DDX23/PRP28 [EC:
5.6.2.7
]
Organism
nni
Nipponia nippon (crested ibis)
Pathway
nni03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nni00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104019885 (DDX23)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nni03041
]
104019885 (DDX23)
Enzymes [BR:
nni01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
104019885 (DDX23)
Spliceosome [BR:
nni03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
104019885 (DDX23)
Complex C
U5 SnRNP specific factors
104019885 (DDX23)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
DDX23
ResIII
Mycobacteriophage_73
Motif
Other DBs
NCBI-GeneID:
104019885
NCBI-ProteinID:
XP_009471505
LinkDB
All DBs
Position
Unknown
AA seq
689 aa
AA seq
DB search
MAGELTDKKDRDASPIKEERKRSRSPDRDRERDRERDRDRKGSPSKDRKRHRSRDRRRGS
RARSRSRSRSKSPERDRRHKERDRDRSKKDRDREKDGHRRDKDRKRSSLSPSRGKDSKSR
KERDSRKAEEEEENALKKEKAQPLSLEELLAKKKAEEEAEAKPKFLSKAEREAEALRRRQ
QEVEERQRLLEEERKKRKQFQEMGRKMLEDPQERERRERRERMERETNGTEDEEGRQKIR
EEKDKSKELHAIKERYLGGVKKRRRTRHLNDRKFVFEWDASEDTSIDYNPLYKERHQVQL
LGRGFIAGIDLKQQKREQSRFYGDLMEKRRTLEEKEQEEARLRKLRKKEAKQRWDDRHWS
QKKLDEMTDRDWRIFREDYSITTKGGKIPNPIRSWKDSSLPPHILRGSWEPTPIQRQAIP
IGLQNRDIIGVAETGSGKTAAFLIPLLVWITTLPKIDRIEESDQGPYAIILAPTRELAQQ
IEEETIKFGKPLGIRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLENRYLVLSRC
TYVVLDEADRMIDMGFEPDVQKILEHMPVTNQKPDTDEAEDPEKMLANFESGKHKYRQTV
MFTATMPPAVERLARSYLRRPAVVYIGSAGKPHERVEQKVFLMSESEKRKKLLAILEQGF
DPPIIIFVNQKKGCDVLAKSLEKMGVSPG
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atggccggagaactgacggacaagaaggaccgggacgcatcccccatcaaggaggagagg
aagcgctcccgctccccggatagggaccgggagcgcgaccgggagcgcgaccgggaccgc
aagggttccccctccaaggacaggaagcggcaccgctcccgggacaggagacggggcagc
cgggcccggtcgcggtcccgctcccggtccaagtcgcctgagagggatcgccggcacaaa
gagcgcgaccgagaccggagcaagaaggaccgggaccgggagaaggatgggcaccggcgg
gataaggacaggaagcggtcgagcttgtccccgagcaggggcaaggactcaaagtcccgg
aaggagcgggactcgcggaaagcggaggaggaggaggagaacgctctgaagaaggagaag
gcccagcccctgtccctggaggagctgctggccaagaagaaggctgaagaggaggcggaa
gccaagcccaagttcctgtccaaggcggagcgggaggccgaggccttgcggcggcggcag
caggaggtggaggagcggcagcggctgctggaggaggagaggaagaagaggaagcagttc
caggagatggggaggaagatgctggaagacccccaggagcgtgagcgcagggagcgccgc
gagcgcatggagcgggagaccaacggcacggaggacgaggagggcaggcagaagatccgg
gaggagaaagacaagagcaaagagctccacgccatcaaggagcgttacttggggggagtg
aagaagcggagacgcacgcggcacctgaacgaccgcaagtttgtcttcgagtgggatgca
tcggaagacacgtccattgattacaaccccctgtacaaggagcggcaccaagtgcagctg
ctgggccggggctttatcgcgggaatcgacctgaagcagcagaaacgggaacagtcgcgc
ttctacggagacctgatggagaagaggcggacgctggaggagaaggagcaggaagaggcc
cggctgcggaagctgcggaagaaggaggccaagcagcgctgggacgaccggcactggtcc
cagaagaagctggatgagatgacagacagggactggcgtattttccgcgaggactacagc
atcaccaccaaggggggcaagatccccaaccccatccgctcctggaaggactcctccctg
cccccccacatcctgcgggggagctgggagcccacccccatccagcgccaggcgatcccc
attggcctgcagaaccgcgacatcatcggcgtggccgaaaccggcagcggcaaaaccgcg
gctttcctcatcccgctgctggtgtggatcaccaccctgcccaagatcgatcggattgaa
gagtcggaccagggtccctatgccatcatcctggcccccacccgagagctggcccagcag
atcgaggaggaaaccatcaagtttgggaagccgctgggcatccgcacggtggccgtgatc
ggaggcatctcccgcgaggaccaaggcttccgcctccgcatgggctgcgagatcgtcatc
gccacgccgggacgtctcatcgacgtgctggagaaccggtacctggtgctgagccgctgc
acctacgtggtgctggacgaggcggatcggatgatcgacatgggcttcgagcccgacgta
cagaagatcctggagcacatgcccgtcaccaaccaaaaacccgacaccgacgaggccgag
gaccccgagaagatgttggccaacttcgagtcggggaaacacaagtacagacagaccgtc
atgttcacggccaccatgccgccagcggtggagcgcctggcccgcagctacctccgtcgt
ccggccgtggtctacatcggctccgccggcaaaccccacgagcgggtggagcagaaggtc
ttcctcatgtcggagtcggagaagaggaagaagctgttagccatcctggagcagggcttc
gacccgcccatcatcatcttcgtcaaccagaagaagggctgcgacgtgctggccaagtcc
ctggagaagatgggggtgagtccgggctga
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