Nipponia nippon (crested ibis): 104020114
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Entry
104020114 CDS
T05756
Symbol
SCAF4
Name
(RefSeq) splicing factor, arginine/serine-rich 15
KO
K13167
SR-related and CTD-associated factor 4
Organism
nni
Nipponia nippon (crested ibis)
Brite
KEGG Orthology (KO) [BR:
nni00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nni03021
]
104020114 (SCAF4)
03041 Spliceosome [BR:
nni03041
]
104020114 (SCAF4)
Transcription machinery [BR:
nni03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
104020114 (SCAF4)
Spliceosome [BR:
nni03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR proteins
104020114 (SCAF4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CID
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
104020114
NCBI-ProteinID:
XP_009471767
LinkDB
All DBs
Position
Unknown
AA seq
1080 aa
AA seq
DB search
MEMKPPISRAKMILITKAAIKAIKLYKHVVQIVEKFIKKCKPEYKVPGLYVIDSIVRQSR
HQFGTDKDVFGPRFSKNITATFQYLYLCPSEDKSKIVRVLNLWQKNGVFKIEIIQPLLDM
AAGTSATAPMTENATNNEGSPPPPAKVPSEPPQVTANSVPTVPQLPSSDAFAAVAQLFQT
TQGQQLQQILQTFQQPQKPQSPVIDNTVMAQVQAITAQLKTTAAQPPEQKAAFPPPEQKT
SFDKKLLDRFDYDDEPEAVEDSKKEDSAPSPSVSQPALTSLSFSAQAGWCSIPGGFPGEG
IQQPVFPQLPNMDPFQQRMMGIQQDPMRHQVPLPPNGQMPGFGLLPTPQFPPMAQPVIPP
TAPVQQTFQSPFPVQSESHMQKPHQQDMEVEQPPIQEGKRHVSDNRKSRSRSASRSPKRR
RSRSGSRSRRSRHRRSRSRSRDRRRHSPKSRSQERRERERERERRSKGLPQIKSETVSVC
STTLWVGQLDKRTTQQDVGSLLEEFGPIESINMIPPRGCAYIVMVHRQDAYRALQKLSRG
NFKVNQKSIKIAWALNKGIKPDYKQYWDVELGVTYIPWDKVKPEDLESFCEGGMLDNETL
SPEWKGIPKKSENEVAQNGGAEATHNEPVSPIPKALPVPIPVPMPAPITVPPPQVPPHPS
GPPVVGALQPPAFTAPLGIPPPGFAPGVPPPPPPPFLRPGFNPMHLPPGFLPPGPPPPIT
PPVSVPHTPAVNIPNSTATGVNEDTTKDSSVGNPIPTVVSGSRGNAETTDSSKIYGTVPP
PVAPTNVPAPVTQAIPLLGTQGVAPPPPAPVVGLQTPSTGLLGARPGLIPLQRPPGMPPP
PLQRFPLMPPRHMPPHMMHRGPPPGPGPGGFGMPPPHGMKTPFPPPGHFVRPGGMPGSGG
PGGPEDNRDGRQFRNDRQTFTPNRDQERFGRRSFGNRVENDRERYGNRNDDRDHERLGNR
DRRDWGRRSPERDRHRDLEDRNRRSSGHRDRERDSRDRESRRDKEENRGKEKPEMTDRAD
GDKNHESHSGKMEDADIVSELAAGESEPTGVKPVEELPSEATSSVEQAEKEMGSVAEAPR
NT seq
3243 nt
NT seq
+upstream
nt +downstream
nt
atggagatgaaacctccgatttcccgagcaaaaatgattctcatcacaaaagctgccatt
aaagctattaagctctacaagcatgttgtccagattgtagagaagtttatcaaaaagtgc
aaaccggagtataaagtccctggattgtacgttattgactctattgttcgtcagtctcgt
caccagtttggaacggacaaagatgtttttgggccaagattctctaaaaacattacggcc
acattccagtatttgtatctctgtccatctgaagacaagagtaaaatagtccgtgtcctg
aacctttggcagaaaaatggagtatttaaaattgaaataattcagcctcttctggatatg
gcagcaggaactagtgccactgcaccaatgacagaaaatgctactaataatgaaggctcg
ccgccccctccagcaaaggttccttcagagccccctcaagttactgctaactcagtacct
actgtgccacagttgcccagttctgatgccttcgcagctgtagctcagttgtttcaaaca
acgcaaggacaacagcttcagcaaattcttcagacttttcaacagcctcaaaaaccccag
tcaccagtcatagataacactgtgatggctcaggttcaagctattactgctcagttgaaa
actacagcagcacaaccaccagaacaaaaagctgctttcccaccacctgagcaaaaaaca
tcatttgacaaaaagctgctagatcggtttgactatgatgatgaaccagaagcagtggaa
gattcaaagaaagaagattcagctccttctccttcagtttctcagccagctttgacctct
ctctcattcagtgcacaggctggatggtgctcaatacctggtggatttccaggagaaggt
atacaacagccagtatttcctcagcttccaaatatggatccttttcagcagcgaatgatg
ggaatacaacaggatccaatgcgtcaccaggttccgcttcctcctaatgggcaaatgcca
ggttttggtctcctgcctaccccgcagtttccacctatggctcagcctgtgattccgcca
acagcacctgtgcagcaaacttttcagtctccttttccagtacagagtgaatcacacatg
caaaaaccacatcagcaggatatggaagtggaacagccacctattcaagagggaaaacgg
catgtttctgacaacagaaagtcaagatctagatctgcgtcaaggtcacctaaaaggaga
cgttcaagatctggctcccgatctcgaaggtcacgtcaccgtcgatctcgatctcggtcc
agagatagacgccgacactctcctaagtctcggtcgcaagaaagacgtgaacgtgagagg
gagagagaacgcaggtcaaaaggccttcctcagatcaagtcagaaactgttagtgtttgt
agtactacgctttgggtaggacaacttgacaaaagaacaactcaacaggatgttggaagt
cttttggaggagtttggcccaattgaatcaataaacatgataccgcctagaggatgtgcc
tatattgtaatggttcacagacaagatgcttaccgtgccctacaaaaactgagccgagga
aacttcaaagtcaatcagaaatctataaagattgcatgggctttgaataaaggaataaag
ccagattacaagcagtattgggatgtagaattaggtgttacttacataccatgggacaaa
gtgaaacctgaagatcttgaaagtttctgtgaaggaggaatgttggacaatgaaactctt
agtccagagtggaaggggattcccaagaagtctgaaaatgaagtagctcaaaatggaggt
gcagaagctactcataatgaaccagtgtcacctatacctaaagctttacctgttccaatt
cccgttcccatgcctgcaccaataacagtacctcctccacaggttccaccacacccatca
ggtcctcctgtggttggtgcactccagccacctgctttcacagcacccttaggaatccca
cctcctggatttgctcctggagtgccaccaccgccgccgcctccatttttacgacctggt
ttcaacccaatgcatttacccccaggcttccttcctcctggaccaccaccacctataact
cctccggtatctgttcctcacactccggcagtaaacatcccaaattctacagcaactggt
gtgaatgaagacactacaaaagattcatctgtaggaaatcccatcccaacagtggtttct
ggatccagagggaatgctgaaactactgatagttccaaaatatacgggactgttccacct
cctgtagcacctactaatgtacctgctcctgtcacccaagctattccacttcttggcact
caaggagttgcgccgcccccgccagcccctgttgttgggttgcagactccatccactggc
ctcttaggtgcccggcctggtttgataccgctccagcgaccgccagggatgccaccgcct
ccgctgcagcggttccccttgatgccaccgcgacacatgcctcctcacatgatgcacaga
gggcccccaccggggccggggccggggggctttgggatgcctcccccccacggaatgaaa
acccccttcccaccgccgggtcactttgtgcgacctggggggatgccgggaagcgggggg
ccaggcggacccgaggataacagagatgggaggcagtttaggaacgacaggcagacgttc
acgcctaacagagaccaggaaaggtttggaaggagatcttttggaaatcgggtagaaaac
gatcgtgagcgctatggtaaccgcaacgatgacagagaccacgagcgacttggtaatcgc
gacaggcgagactggggacgaagaagccccgagcgtgacagacacagagacttggaggac
aggaacaggcggtccagtggccatcgagaccgagagagagattcgagagacagggagtct
cgcagagacaaggaagaaaaccgaggaaaggagaaaccggagatgacagacagggccgat
ggcgacaaaaaccatgaatctcatagcggcaaaatggaagacgcagacattgtttccgaa
cttgctgcgggagagtctgaacctacaggtgtaaaacctgtggaagagttaccatccgag
gctacctcatctgtggaacaagcggaaaaggagatgggctcagtggcggaggctcctcgc
tag
DBGET
integrated database retrieval system
