Nipponia nippon (crested ibis): 104020126
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Entry
104020126 CDS
T05756
Symbol
VCL
Name
(RefSeq) vinculin
KO
K05700
vinculin
Organism
nni
Nipponia nippon (crested ibis)
Pathway
nni04510
Focal adhesion
nni04520
Adherens junction
nni04810
Regulation of actin cytoskeleton
nni04820
Cytoskeleton in muscle cells
nni05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
nni00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
104020126 (VCL)
04520 Adherens junction
104020126 (VCL)
09142 Cell motility
04820 Cytoskeleton in muscle cells
104020126 (VCL)
04810 Regulation of actin cytoskeleton
104020126 (VCL)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
104020126 (VCL)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
nni04812
]
104020126 (VCL)
04147 Exosome [BR:
nni04147
]
104020126 (VCL)
Cytoskeleton proteins [BR:
nni04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
104020126 (VCL)
Exosome [BR:
nni04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
104020126 (VCL)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vinculin
Talin_IBS2B
VMAP-M0
Motif
Other DBs
NCBI-GeneID:
104020126
NCBI-ProteinID:
XP_009471816
LinkDB
All DBs
Position
Unknown
AA seq
1169 aa
AA seq
DB search
MRRAATSKYEPAQCSGLRAAKCYCSSDGDTADIDLSGIRRRIMAALRNGYACLQNRPVCS
KKDGADFHITGFFFIEKPACKDPIPTTRIHQNNTSKYERVGKETVQTTEDQILKRDMPPA
FIKVENACTKLVRAAQMLQADPYSVPARDYLIDGSRGILSGTSDLLLTFDEAEVRKIIRV
CKGILEYLTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQELTHQEHRVMLVNSMNT
VKELLPVLISAMKIFVTTKNSKSQGIEEALKNRNFTVEKMSAEINEIIRVLQLTSWDEDA
WASKDTEAMKRALALIDSKMNQAKGDAGEQAIRQILDEAGKAGELCAGKERREILGTCKT
LGQMTDQLADLRARGQGATPMAMQKAQQVSQGLDMLTAKVENAARKLEAMTNSKQAIAKK
IDAAQNWLADPNGGSEGEEHIRGIMAEARKVAELCEEPKERDDILRSLGEISALTAKLSD
LRRHGKGDSPEARALAKQIATSLQNLQSKTNKAVANTRPVKAAVHLEGKIEQAQRWIDNP
TVADRGVGQAAIRGLVAEGRRLANVMMGPYRQDLLAKCDRVDQLAAQLADLAARGEGESP
QARAIAAQLQDSLKDLKTRMQEAMTQEVSDVFSDTTTPIKLLAVAATAPSDAPNRDEVFD
ERAANFENHAAKLGATAEKAAAVGTANKTTVEGIQATVKSARELTPQVVSAARILLRNPG
NQAAYEHFETMKNQWIDNVEKMTGLVDEAIDTKSLLDASEEAIKKDLDKCKVAMANIQPQ
MLVAGATSIARRANRILLVAKREVENSEDPKFREAVKAASDELSKTISPMVMDAKAVAGN
ISDPGLQKSFLDSGYRILGAVAKVREAFQPQEPDFPPPPPDLEQLHLTDELAPPKPPLPE
GEVPPPRPPPPEEKDEEFPEQKAGEAINQPMMMAARQLHDEARKWSSKPDVTVINEAAEA
GVDIDEEDDADVEFTLPSDIEDDYEPELLLMPTNQPVNQPILAAAQSLHREATKWSSKGN
DIIAAAKRMALLMAEMSRLVRGGSGNKRALIQCAKDIAKASDEVTRLAKEVAKQCTDKRI
RTNLLQVCERIPTISTQLKILSTVKATMLGRTNISDEESEQATEMLVHNAQNLMQSVKET
VREAEAASIKIRTDAGFTLRWVRKTPWYQ
NT seq
3510 nt
NT seq
+upstream
nt +downstream
nt
atgcgacgtgcggccacgtctaagtatgagccagctcagtgctctggcctgagagctgcg
aagtgttactgctcctcggatggagatactgctgatattgatctcagtggaatcagaagg
agaataatggcagctttgagaaatggctacgcatgcttacagaacaggcctgtgtgtagc
aagaaggatggagccgacttccacatcactggtttcttcttcattgaaaagccagcttgc
aaggacccaatacctaccaccagaatccaccagaataacacatcaaaatatgagagagtt
ggaaaagagactgtgcagacaacagaagaccagatcttgaaaagggatatgccaccagca
tttatcaaagtggagaacgcctgcaccaaacttgttcgggcagcccagatgctgcaagca
gatccttattcagtaccagctcgtgactatctaattgacggatcaagaggcatcctttct
ggaacgtcagacttactgctgacatttgatgaagcggaggtccgtaaaatcatccgtgtc
tgcaaaggaatattggaatatctgactgtggcggaagtagtagagactatggaggatttg
gtgacatacacaaagaatctagggccaggaatgacaaaaatggccaaaatgattgatgag
agacaacaggaattaactcatcaggaacatagggttatgctggtaaactccatgaatact
gtgaaggagctattgccagtacttatttcagctatgaagattttcgtaaccacgaaaaat
tctaaaagccagggaatagaagaggcattgaaaaatcgcaatttcacagtagagaaaatg
agtgctgagataaatgaaataatccgtgtattacaactcacttcctgggatgaagatgcc
tgggcaagcaaggacactgaagccatgaaaagagctttagccttaatagattcaaagatg
aaccaggcaaaaggggatgctggtgagcaagcaataaggcagatccttgatgaagctgga
aaagcaggagaactgtgtgcaggcaaagaacgcagagagattctgggaacatgcaaaacg
ctgggccagatgactgatcaactggctgacctcagagctagaggacagggtgctacaccc
atggctatgcagaaagcacagcaggtgtcacaaggtctggatatgctcactgcaaaagtg
gagaacgcagcccgcaaattagaggccatgacaaactctaagcaggcaattgctaagaag
atcgatgctgctcagaattggcttgcggatcctaatgggggcagtgaaggagaagaacac
attcggggaattatggctgaagcaagaaaagttgcagaattatgtgaggagcctaaagaa
agagatgatatccttcgttccttgggggaaatctctgctttgacagctaagctgtcagat
ctgcggcgacatgggaaaggtgactctcctgaggcccgtgcgttggccaagcagatagct
acatcacttcagaatttacagtccaagacaaacaaggctgtagcaaataccaggccagtt
aaagcagctgtccatttggagggcaagattgagcaagctcaaaggtggatagacaatcct
acagttgctgatcggggagtaggccaggcagcaattcggggtctggttgcagaaggtcgc
cgtttagccaatgtcatgatgggaccttatcgtcaagacctgcttgccaagtgtgaccgt
gtagaccagctggctgctcagctagctgaccttgcagcaagaggggagggagaatctcct
caggccagggcaattgctgctcagcttcaggactcactgaaggatctgaaaacacggatg
caagaagcaatgacccaagaggtttctgatgtttttagtgataccacaactcctattaaa
ttgctagcagtagcagccactgctccttctgatgctcccaatagagatgaggtgtttgat
gaaagagcagcaaactttgaaaaccatgctgctaaactgggagctacagcagaaaaagca
gctgcagttggaactgcgaataaaactactgtggagggcattcaagcaacagtgaaatca
gcaagggaacttaccccacaggtagtatcagctgctcgtatcctcctgagaaatcctgga
aatcaagctgcttatgaacattttgagaccatgaaaaaccaatggattgataatgtagaa
aaaatgacagggttggtggatgaagccattgatactaaatccctgttggatgcatcagaa
gaggctattaagaaagatcttgataaatgtaaagttgcgatggctaatattcaacctcag
atgctggtagctggtgccaccagcattgctagacgagcaaaccgcatcctactggtagca
aaacgggaggttgaaaattcagaagaccctaaattccgtgaggctgttaaagcagcctct
gatgagctaagcaaaactatatcgccaatggtaatggatgctaaagctgtggcaggaaat
atttctgatcctggtttgcagaagagtttcttggattctgggtacagaattctgggagct
gtggccaaagtcagagaagctttccagcctcaggaaccagattttccccctcctcctcct
gaccttgagcagcttcatctgactgatgagcttgctcctccaaaaccaccacttccagaa
ggtgaggttcccccacccagaccaccaccacctgaagaaaaggatgaagagttcccagag
cagaaagcaggagaagctattaatcagcccatgatgatggctgctaggcagttgcatgac
gaagcccggaaatggtctagcaagcctgatgtgactgtgattaatgaagcggctgaggct
ggtgtagatatagatgaggaggatgatgcagatgttgaattcactctcccctctgacatt
gaagatgattacgagcctgagctgctgttaatgccaaccaatcagcctgttaaccagccc
attctggctgctgctcagtctctacatcgggaagcaaccaagtggtctagtaagggtaac
gacatcattgctgctgctaaacgaatggcactgctaatggcagagatgtcgcgcctggtg
agaggaggtagcggaaacaagcgtgcccttattcagtgtgcaaaggatattgctaaggca
tcagatgaagtcactcgattggccaaagaggtggcaaagcagtgcactgacaagcgcatt
agaacaaacctcttgcaggtctgcgagcgaatcccaaccatcagtacacaactcaaaatt
ctttccactgtcaaagctaccatgctgggcagaactaatatcagcgatgaagagtcggaa
caggcaactgagatgttggttcataatgcccagaatctcatgcagtctgtgaaggaaact
gtgagagaagctgaagcagcatccattaagatcagaacagatgctggattcactcttcgc
tgggtcagaaagaccccgtggtatcagtaa
DBGET
integrated database retrieval system
