Nipponia nippon (crested ibis): 104020337
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Entry
104020337 CDS
T05756
Symbol
UBR1
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase UBR1
KO
K10625
E3 ubiquitin-protein ligase UBR1 [EC:
2.3.2.27
]
Organism
nni
Nipponia nippon (crested ibis)
Brite
KEGG Orthology (KO) [BR:
nni00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nni04121
]
104020337 (UBR1)
Enzymes [BR:
nni01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104020337 (UBR1)
Ubiquitin system [BR:
nni04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
UBR box proteins
104020337 (UBR1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRT6_C
UBR1-like_wing
zf-UBR
ClpS
Motif
Other DBs
NCBI-GeneID:
104020337
NCBI-ProteinID:
XP_009472026
LinkDB
All DBs
Position
Unknown
AA seq
1702 aa
AA seq
DB search
MDPLLEKQEEMVQAAILYPLECYLFGEDPDTFLEKLQQSGTSQLCGKVFKGGETTYSCRD
CAVDPTCVLCMDCFQNSIHKNHRYKMHSSTGGGFCDCGDTEAWKAGPLCTKHEPGASGSA
KENSECQLNEEIMEHSRRVFPSVIKYIVDMLIWEEEKELPPELTIREKVDSYYCVLFNDE
HHSYDHVIYSLQRALGCELGEAQLHTTAIDKEGRRAVKAGHYASCQEAKEEIKRHSENVS
QRPLHVEVLHADVMAHQKFALRLGSWLNKLMSYSSDFRQIFCQICLKEEAGSEKPCFISK
LMLWDAKLHKGARKVLHELIFTSFFMEMEYKKLFAVEFVKYYKALQKEYISDDHDRVLSV
TALSVQMFTVPTLARHLIEEQNVITTITETLLEVLPEYLDKNDKFNFQGYSQDKLNRVYA
VIYDLRYVLVSKPTVWTDHLRERFLEGFVSFLRILTCMQGMEEIKRQIGQHIEVDPDWEA
AIAIQMQLKNILLMFQEWCACDEELLLRAYSECHKAVMRCSTNGRSREKTVFHLCGHTLE
SRPYRVSADPVSIHLPLSRTLAGSHIYLRTVXNAPSKRHMFVAFEELQVELLVEYPLRCL
VLVAQVAAEMWRRNGLSLISQVFYYQDVKCREEMYDKDIIMLQIGASLMDPNQFLLLILQ
RYELADAFKKIKPTKDQDLIKQCNVLIEEMLQILIYIVGERYVPGVSNVTKEDVIMREII
HLLCIEPMAHSAITKSLPENENNETGLENVIDKVATFKKPGVSGHGVYELKDECLKEFNM
FFYHYTKTQHSKAEHTQKKRRKQENRDEALPPPPPPDFSPAFSNVVRILNCDVMMHILRT
ILQRAVELETHLWTEAMIQMVLHLLSLGLLEERQQLQQSPEEEVTFDFYHKATRMGSSAL
NAVNVLMLLEKLKTVPQLESQKDTVNWILQMFDTVKRLREKSSLTTVAATSGSEATKGDE
STQDKEKAERKRKAEAARLHRQKIMAQMSALQRNFIEAHKLLYENTLEAQAKEDAIMEEE
SMSSAVDCSKIALGPKRGPSVAEKEVLTCILCQEEQEVKLESAAMVLSACVQKSTALTQN
RSRILELSGDTLDPLFMHPDLPCGTHTGSCGHVMHAACWQKYFEAMQLNFRQRLHVEQIF
DLENGEYLCPLCKSLCNTVIPIVPLQAQKINSEDAEAVAQILSLARWLEIITVRISGYSV
KNAKGEKPNLPAFANKGMGNSALEFHSILSFGVQSSAKYSSSIKEMLILFATTIYRVGLK
VAPNEADYRIPMMTWSTCAFTIQCIENLLETEGKPLFGSLQNRQHSGLKALVQFAAAQRT
TSPQVLIQKHLIRLLGVLLPNFKVEDTPSLLEVDMFHILVGVVLSFPSLYWQDAVDLQPS
SISSAYNHLYLFHLTTLAHITQIVVSSATESPTTRSSDNSEEALSAQSFCREVCRYTSGC
FSQDIPGWLVWDCVKKGIMPYLRSAALFFHYLLGVSPPEELLQVSEEGQFKALCSYLSLP
TNLFLLFQEYWDTVNPLLQRWCADPVVLSCLKGKSIAIRYPRKRNSLIELPEDYSCLLNQ
ASQFRCPRSSDDEQKHPVLCLFCGAMLCSQNTCCQELVNGEELGACTSHALQCGAGVCMF
LKIRECKVVLIEGKTRGCLYPAPYLDEYGETDPGLKRGNPLHLCRERYRKLHLLWQQHCI
IEEIARSQETNQIFFGFNWQLL
NT seq
5109 nt
NT seq
+upstream
nt +downstream
nt
atggaccccttgctggagaaacaagaagaaatggtccaggcagccatattataccccctg
gaatgttatttgtttggggaagacccagatacattcctggagaaactacaacagagtgga
acctcccagctctgtgggaaggtgttcaaaggaggggagacaacatactcttgcagagac
tgtgcagttgatccaacttgtgtactctgtatggactgcttccagaacagcattcacaag
aaccaccgatataagatgcatagctccactggaggcggattttgtgactgtggggataca
gaggcgtggaaggctggaccgctgtgtactaaacatgagcctggagcatcaggttctgca
aaagaaaattctgagtgtcagttgaatgaagaaattatggagcactctaggagggtgttt
ccctctgtgataaagtacattgtagatatgcttatatgggaagaagagaaggaactgcct
ccggagctcacaattagagagaaggtagacagctactactgtgtccttttcaatgatgaa
catcattcttacgatcatgtcatctatagcctgcaaagggcacttggctgtgaacttggt
gaagcccagttgcatactactgccatagataaagagggtcgtagagctgttaaggcagga
cattatgcctcttgtcaggaagcaaaagaagaaatcaagaggcattctgaaaacgtttct
caacgaccacttcatgtggaggttcttcatgctgatgttatggctcaccagaagtttgcc
ttgcgccttggttcttggctgaacaaactcatgagctattcaagtgactttcgccagatc
ttttgtcaaatatgtctcaaagaagaagctggatctgaaaagccgtgcttcataagcaag
ttgatgctatgggatgcaaaacttcataaaggggcaaggaaggttcttcatgaacttatc
ttcacgagttttttcatggaaatggaatacaaaaaactttttgctgtggaatttgtgaag
tattacaaggcattgcaaaaagaatacatcagtgatgatcatgacagagttctctctgtg
acagcgctctcagttcagatgttcactgtacctactctggcccgacatcttattgaagag
caaaatgtaatcaccaccattacagagacgctcctagaagtgcttccagagtatctagac
aaaaatgacaagttcaacttccagggttacagtcaggacaaactgaaccgggtatatgca
gtaatatatgacctcaggtatgtcttagtcagcaagcctacagtatggacagaccatctg
agggagcggtttttagaaggatttgtttctttcctaaggattctaacttgcatgcaggga
atggaggagataaaaagacagattggtcagcacattgaggtggaccctgactgggaagca
gctattgctatacagatgcagctcaagaacattcttttgatgttccaggagtggtgtgcc
tgtgacgaagaactgttgctcagggcctacagcgaatgtcataaagctgtgatgaggtgc
agcacaaatggccgctcacgggaaaagacagtgtttcacttgtgtggccatactctggag
agcagaccttacagggtgtctgcagatcctgtcagcatacacttaccgctgtctaggact
cttgctggtagccacatatatcttaggactgtttaaaatgctccttctaaaaggcatatg
tttgtagcatttgaagaattacaagtggagctgctagtagaatatcctttgcgatgtctt
gtcttggttgctcaggttgctgcagagatgtggagaaggaatgggctctccctgataagt
caggtattctattatcaagatgttaaatgcagagaagagatgtatgataaagacatcatc
atgctccagataggtgcatctcttatggatccaaaccagttcctcctgctgatactgcag
agatacgagcttgctgatgctttcaaaaagatcaagcccaccaaagatcaggatttgatc
aaacaatgtaacgtgttaatagaagagatgctacagattctcatctatattgtgggggaa
agatacgtgcctggagtgagtaatgtgacaaaagaagatgttatcatgagagaaatcatc
catctgttatgtattgaaccaatggctcacagtgcaattaccaagtccttgcctgaaaat
gagaacaatgaaactggcttggagaatgtaattgataaagtggctacatttaagaaaccg
ggtgtgtctggccatggagtttatgaactgaaagatgaatgcttgaaggagttcaatatg
ttcttttatcactatactaagacacagcacagcaaggctgaacatacacaaaagaaaaga
agaaaacaagaaaacagagatgaagcattaccaccacctcctcctccagacttcagtcct
gcattcagcaatgtggtgaggattctgaactgtgatgttatgatgcacatactgcggacc
attcttcagagagcagtagaactggaaacccacttgtggactgaagctatgatccaaatg
gtgcttcatctcctttctttagggttactagaagagaggcagcagttacagcagtctcca
gaagaggaagtaacctttgatttttatcacaaagcaacacgaatgggaagctcagccttg
aatgctgtgaacgtgttaatgcttctggaaaaattaaagacagttcctcagttagagtca
cagaaggacacagtcaattggatactgcagatgtttgacacagtgaaaagattgagagaa
aaatctagtttgacaacagtagcagctacatcaggctcagaagctacaaaaggtgatgag
agcactcaggataaagagaaagctgagcggaagagaaaggcagaagcagctaggttgcac
cgtcagaagataatggcccagatgtctgcactgcagaggaattttattgaagcccataag
ctcctgtatgaaaacacactggaggcacaggcaaaagaagatgctattatggaggaagaa
agcatgtcctcggcagttgattgctccaaaattgctttgggtcccaaacgaggtccatct
gttgctgaaaaagaagttctgacctgtattctttgtcaggaggaacaggaagtaaagttg
gaaagtgctgccatggtactatctgcctgtgtccagaaatcaactgccttaactcagaat
aggagcagaattcttgaactctcaggggatacgctagatcctctcttcatgcaccctgac
ttaccttgtgggacccacacagggagctgtggtcatgtgatgcatgcagcctgctggcag
aagtactttgaagccatgcagctgaactttcgacagcgtctacatgttgaacagatattt
gacttggagaatggagagtatctttgtccactttgcaaatctctgtgcaatactgtgatt
cctattgttccattgcaggctcagaaaataaacagtgaggatgcagaggcagtagctcaa
attctgtccctggctaggtggctggagattatcacagtcaggatatcaggctacagtgtg
aaaaacgctaaaggagagaaaccaaatcttccagcttttgccaacaagggaatggggaac
tctgctttggaattccattccatccttagttttggtgttcagtcctcagccaaatactca
agcagtatcaaggagatgcttattctctttgccaccaccatttatagagttgggctaaaa
gttgctccaaatgaagctgattaccggattcctatgatgacctggagcacatgtgctttt
accatccagtgtatagaaaacctcttggaaacagagggcaagcctttatttggatctcta
caaaatagacagcacagtggccttaaagcattagtgcagtttgcagctgctcaaagaaca
acgtcaccacaggtcctgattcagaaacatctgattcgtcttctaggagttcttctaccg
aactttaaagtggaggacactccatccctcttagaagtagatatgttccacattttggtg
ggagttgtgttatcctttccatctttgtactggcaggatgctgtagacttgcaaccttca
tcaattagttcagcttataaccacctctacctcttccatctgacaacattggcacacata
acacaaatagtcgtctcttcagcaacagaatcccctactactcgatcatctgacaacagt
gaggaggcactgtctgcacagtctttctgtagagaggtttgccggtacaccagtggttgc
tttagtcaggatattccaggctggcttgtgtgggattgtgttaaaaaaggcatcatgcct
taccttcgttctgctgctttgttttttcattatttgctgggagtttctccacctgaggaa
ctactacaagtttctgaagaagggcaattcaaggcactttgtagttacctctctctacct
accaatttgttcctgctcttccaggaatattgggacacagtaaatccactgcttcaaagg
tggtgtgctgacccggtggtgttaagttgtttgaaggggaaaagcattgcaataaggtat
cctaggaaaagaaatagtttaatagagcttcctgaagactatagctgccttctgaaccaa
gcctctcagtttagatgcccacggtcttctgatgatgaacaaaaacatccagtattgtgt
ttattctgtggggctatgttgtgttcccagaatacttgctgtcaggaactggtgaatggg
gaggagctgggagcctgtacttctcatgctcttcaatgtggagctggagtctgtatgttt
ctcaaaatcagggaatgcaaagttgtcctcattgaaggtaaaaccaggggctgcttatat
cctgctccttacttggatgaatatggagaaacagatccaggtttgaaaagaggcaatccc
ctgcacttatgtcgggagcgttaccggaagctccatctgctatggcagcagcactgcatc
atagaggagattgccaggagccaagaaacgaatcagatcttctttggattcaactggcaa
ctgctctga
DBGET
integrated database retrieval system
