Nipponia nippon (crested ibis): 104020437
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Entry
104020437 CDS
T05756
Symbol
SMARCAL1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1
KO
K14440
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 [EC:5.6.2.-]
Organism
nni
Nipponia nippon (crested ibis)
Brite
KEGG Orthology (KO) [BR:
nni00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nni03036
]
104020437 (SMARCAL1)
Chromosome and associated proteins [BR:
nni03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
104020437 (SMARCAL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HARP
SNF2-rel_dom
Helicase_C
ResIII
ERCC3_RAD25_C
DUF7480
TK
Motif
Other DBs
NCBI-GeneID:
104020437
NCBI-ProteinID:
XP_009472146
LinkDB
All DBs
Position
Unknown
AA seq
970 aa
AA seq
DB search
MSSGLTEEQKRRIEENRQKALARRAERLAAQRGGHVGVTGPQVKEQSPGNWGNLKEENNH
VRFISHRQQNPNSPAEQKSYLQKDYNHYTANQQMAGSRGEQQKNCSEDSKQASGIKQFPT
TIPNSLSYSNKHYLDAGGQEHGQQALINLGTFQQPKCYPAFKNPTEPSHPRLIDNGHPDG
SKDLQNRNKFAIKYVSPPSSATPSDSEMQINTSRPTEREGGGGASQASGRMQKLTSSAGA
GSTFEGASCKNVNSVTKGKCVKYGEDRFQVEIGYNAELIAVFKKIPSKSYDPTVKKWNFS
LEDYSSFMEAANQLSSVILAPLGGENAVGLASGSHFIGSRVDVKSLLKMCKNWKKPSALV
KGKCVLISRLRFEVDIGYSAEVIGVFKQMDSRNYDMNTRKWNFLLEDYPKLMEMLQSLVS
VEVEPLPEAVIQTFAAQIQRSASQTDIPDADLSVVDSKIVTSLMPFQREGVNFAILRNGR
LLLADDMGLGKTIQAICIAAYYRKEWPLLVVTPSSVRFTWAEAFHRWLPSLSPGSTNVIV
TGKDNLTASLINIISFDLLSKMDKQLKSTFQVVIIDESHFLRNIKTARCRAAMPLLKAAR
RVILLSGTPAMSRPAELYTQIVAVQPAFFPQFHSFGLRYCGAKKMPWGWDYSGSSNLTEL
KILLEESIMIRRLKSDVLSQLPAKQRKMVVVAPEGISAKTKAVLAAEAKKMAKGYGSKQQ
EKEALLLFYSRTAEAKIHSVIEYILELLESGNHKFLVFAHHKIVLDAIVAELEKKHVEYI
RIDGSTSSAERQSLCHKFQISEKQAVAVLSLTAANMGLTLSAADLVVFAELFWNPGVLIQ
AEDRAHRIGQTSSVNVHYLVAKGTADDYLWPMIQGKIKVLGEAGLSETSLSKTAESTNYC
PKPDPKQKTIYDLFQRTFSESKDDIDEVLLLEAADACCEFDSGSALQDTEGETCSVSSPK
KRRIEDFLKV
NT seq
2913 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcaggccttacagaggaacaaaagagaagaattgaagagaaccgccagaaggct
ttggctaggagagcagagaggctagcagcccagagaggtgggcacgtgggggtcactgga
cctcaggtgaaagaacagagtccaggcaattggggaaacttgaaggaagaaaacaatcat
gtcaggttcattagccatcgccaacagaatccaaacagtcctgcggagcagaagagctat
cttcagaaagattataatcattacactgcaaaccaacagatggctggttcacgtggagag
caacaaaagaattgttcagaggactcgaaacaagcaagtggcattaaacagttccctaca
acaatcccaaattctctgagttattccaataaacattacttggatgctggtggtcaggaa
catggacaacaagctttaattaatcttggtacattccagcagcccaaatgctacccagct
ttcaaaaatcctacagaaccatctcatcctagattaattgataatgggcaccctgatggt
agtaaagatttacaaaatcggaacaaatttgccataaaatatgtttcaccaccaagcagt
gccaccccaagtgattcagaaatgcagataaacacaagcagaccaacggaaagagaaggg
ggaggtggtgcctctcaggccagtggtaggatgcagaagctgaccagctctgctggtgca
ggctctacctttgaaggtgcctcttgcaagaatgtaaatagtgttacaaaaggaaaatgt
gtgaaatatggggaagaccgattccaggtcgaaatagggtataatgctgaactcattgct
gtgtttaagaagataccaagcaaaagctatgatcctactgtgaaaaaatggaatttcagc
ctggaagattacagcagtttcatggaagcagcaaatcaactttcgtcagtaattctggca
ccactgggaggagaaaatgcagttggcttggcatcaggctctcatttcattggcagtagg
gttgatgtgaaatccctcttgaagatgtgtaagaactggaagaaaccctcggcccttgtc
aaagggaagtgcgtgctgatctctcgcttgcggtttgaggttgatattgggtattctgca
gaagtgattggagtgttcaaacagatggattccagaaattatgatatgaacaccagaaag
tggaatttcctgctggaggactatcccaaactgatggaaatgttacagagccttgtgtcg
gtagaagtggagccactgcccgaggcagtaatacaaacctttgctgctcaaatacagaga
tctgcgtcacagacagacattcctgatgctgacctttcagtagtggactccaaaattgtg
acgagcctcatgccctttcagcgggaaggtgtgaattttgcaattttacgaaatggacgt
ttacttcttgcggatgacatgggattgggcaagaccatccaggcaatctgcattgctgca
tattaccgaaaggaatggcccttgctggtggtgactccatcttccgtgaggtttacatgg
gcagaggcatttcacaggtggcttccatcgttgagtccaggtagcaccaatgtcatagtg
actggcaaagacaacctaacagcaagcttgatcaacatcatcagctttgacctcctcagc
aagatggacaagcagcttaagagcacttttcaagtagttattattgatgaatcccatttc
ctaaggaacataaaaactgcacgatgccgagctgccatgcctctactcaaggctgccagg
agagtgatcttgctttcgggaacccctgccatgtcgcggcccgcagagctctacacgcag
atcgtggctgtccagccagccttcttcccgcagttccactccttcgggctacgctactgt
ggtgccaagaagatgccgtggggttgggactactctggatcatccaacttaactgaactg
aaaattttgctggaagagtccatcatgatccgacgtctgaaatcagatgtgctttcccag
cttccagcaaagcaacgcaaaatggttgtggtggctcctgaaggcatcagtgcaaagacc
aaagctgtcttggcagctgaagcaaagaagatggccaaaggatatggaagtaaacaacag
gagaaggaagctcttctcctcttctacagcagaacggcagaagctaaaatccactcagtc
atagaatacatcctggagttactggaaagtgggaatcataaattcctggtgtttgctcat
cacaagatagtgctggatgcaatagttgcagagctggagaagaaacatgttgaatacatt
cgcattgacggctccacatcttcagccgagcggcagtctctgtgccacaagttccagatc
tcggagaagcaggctgtggctgtcctgtccctcactgctgcaaacatgggcctgacactg
tctgctgcggacctggtggtgtttgcagagctcttctggaatccgggggttttgatccaa
gcagaagatcgggcacatcgaattggacagaccagctctgttaatgttcactacctggtg
gctaaaggcacagcagatgactacttatggccaatgattcaagggaaaatcaaagtgttg
ggggaagctggtctttcagaaaccagtttgtccaaaacagctgaatctactaattactgc
cctaagccagatccaaagcagaagaccatctatgaccttttccagaggaccttctctgag
agcaaagacgacattgatgaagttttgcttttggaggcagctgatgcttgctgtgagttt
gactctggcagtgccttgcaagatacagaaggagagacgtgttcagtgagttcccccaaa
aagcggcgtattgaggattttttaaaagtgtaa
DBGET
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