Nipponia nippon (crested ibis): 104020661
Help
Entry
104020661 CDS
T05756
Symbol
PCDH9
Name
(RefSeq) protocadherin-9
KO
K16498
protocadherin delta 1
Organism
nni
Nipponia nippon (crested ibis)
Pathway
nni03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
nni00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
104020661 (PCDH9)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
nni01009
]
104020661 (PCDH9)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
nni04515
]
104020661 (PCDH9)
Protein phosphatases and associated proteins [BR:
nni01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
104020661 (PCDH9)
Cell adhesion molecules [BR:
nni04515
]
Cadherins
Protocadherins
104020661 (PCDH9)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_2
Cadherin_CELSR2_9th
RET_CLD1
MAP17
V_ATPase_I
RCR
EphA2_TM
DUF6249
7tm_3
DUF6377
Big_9
Motif
Other DBs
NCBI-GeneID:
104020661
NCBI-ProteinID:
XP_009472385
LinkDB
All DBs
Position
Unknown
AA seq
1237 aa
AA seq
DB search
MDLRDFYLLAALIACLRLDSAIAQELIYTIREELPENVPIGNIPKDLNISHINAATGTSA
SLVYRLVSKAGDAPLVKVSSTTGEIFTTSNRIDREKLCAGASYAEENECFFELEVVILPN
DFFRLIKIKIIVKDTNDNAPMFPSPVINISIPENTLINSRFPIPSATDPDTGFNGVQHYE
LLNGQSVFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKIKVEDGGTPQKSSTAILQV
TVSDVNDNRPVFKESQVEVHIPENAPVGTSVIQLHATDADIGSNAEIRYIFGAQVAPATK
RFFALNNTTGLITVQRSLDREETAIHKVTVLASDGSSTPARATVTINVTDVNDNPPNIDL
RYIISPINGTVYLSEKDPVNTKIALITVSDKDTDVNGKVICFIEREVPFHLKAVYDNQYL
LETSSLLDYEGTKEFSFKIVASDSGKPSLNQTALVRVKLEDENDNPPIFSQPVIELSVSE
NNRRGLYLTTISATDEDSGKNADIVYQLGPNASFFDLDRKTGVLTASRVFDREEQERFIF
TVTARDNGTPPLQSQAAVIVTVLDENDNSPKFTHNHFQFFVSENLPKYSTVGVITVTDAD
AGENKAVTLSILNDNENFVLDPYSGVIKSNVSFDREQQSSYTFDVKAVDGGQPPRSSTAK
VTINVMDVNDNSPVVIYPPSNTSFKLVPLSAIPGSVVAEVFAVDIDTGMNAXXXXTIVSG
NNKGLFRIDPVTGNITLEEKPTPNDVGLHRLVVNISDLGYPKSLHTLVLVFLYVNDTAGN
ASYIYDLIRRTMETPLDRNIGDSSQPYQNEDYLTIMIAIVAGAMVVIVVIFVTVLVRCRH
ASRFKAAQRSKQGAEWMSPNQENKQNKKKKRKKRKSPKSSLLNFVTIEESKPDDAVHEPI
NGTISLPAELEEQSIGRFDWGTAPPTTFKPNSPDLAKHYKSASPQSAFHLKPDTPVSMKK
HHVIQELPLDNTFVGGCDTLSKRXXXXXXXXSASECSSQGGFKTKGPLHTRQVNEHFYWH
NIPAMPRTCPSSRGWRGSENEKSHFESQRRVTFHLPDGSQESCSDSGLGDHEPVGGGTLI
SHPLPLVQPQDEFYDQASPDKRTEADGNSDPNSDGPLGPRGLAEATEMCTQECLVLGHSD
NCWMPPSLGPYQQPKSPLSTFAPQKEWVKKDKLVNGHTLTRTWKEDSNRNQFSDRKQYGS
SEGHFNTGNHMTDIPLANLKSYKQASGAVESPKEHQL
NT seq
3714 nt
NT seq
+upstream
nt +downstream
nt
atggacctgagggatttttacctgttggccgctttgattgcctgtttaaggctggattct
gctatagctcaagaacttatttacactattagagaagagctgcctgaaaacgtacccata
gggaacataccaaaggacctgaacatttctcacatcaatgctgccacggggaccagtgcc
agcctggtctacagactggtgtctaaagcaggggatgcccctctggtcaaagtgtccagt
accactggggaaatctttacgacatctaacagaatagacagagaaaaactctgtgctgga
gcttcctatgcagaagaaaacgagtgtttctttgaacttgaagtggtgatcctccccaat
gacttttttaggctgatcaaaataaaaatcattgtaaaggatactaatgacaatgcacct
atgtttccatcccctgtcatcaatatctccatcccagaaaacactctgatcaacagtcgc
tttccaatcccatcagcaacagatcctgacacaggtttcaatggtgtgcagcactacgag
ttgttaaacgggcagagtgtctttggactggatattgtagaaactccagaaggagagaaa
tggcctcagctgatcgtgcagcagaacttggacagagagcagaaggacacctacgtgatg
aaaatcaaagtggaggatggaggtaccccccagaaatccagcacagccatcctgcaagtc
acagtaagtgatgtcaatgataacaggccagtgtttaaagagagtcaagtagaggttcat
ataccagagaatgcccctgtaggcacttctgtaattcagcttcatgctacagatgcagat
ataggaagcaatgcagaaatcagatatattttcggtgcccaagttgcccctgcaaccaaa
agattttttgctttaaacaacaccacagggctgattacagttcagaggtccttagatcga
gaagagactgctattcacaaagtgacagtgctggctagtgatggtagctctacaccggct
cgggcaactgttaccatcaatgtcactgatgtaaatgataaccctcctaacatagacctc
aggtacataataagtcccatcaatggcacagtgtacttatctgagaaagatcctgtcaat
acaaagattgccctaattacagtttcagataaggacactgatgtgaacggcaaagtgatc
tgtttcattgagagagaggtccccttccacttgaaggcagtttacgacaaccagtatttg
ttagagacctcttccttgttggactatgagggcaccaaagaattcagctttaaaattgtt
gcttctgattctggcaagcccagtttgaaccagactgccctggtaagagttaaactggag
gatgaaaatgacaaccctccgattttcagccagcctgtaattgagctgtcagtttctgaa
aacaatcggcgtggtctatacttaacaactattagtgccacagatgaagacagtgggaaa
aatgcagacattgtttatcagcttggccctaatgcctcctttttcgatctggatcgaaag
acaggagttttgacagcctccagagtttttgacagagaagagcaggaacgtttcattttc
actgttacagcccgagacaatggcacccctcctttacagagtcaagcagctgtaattgtt
actgtgttggacgaaaatgacaacagtcccaaatttactcataatcacttccagtttttt
gtatcggagaacttaccaaagtatagcacggtgggggtgatcactgtgaccgatgcggat
gccggggaaaataaagcggtgaccctttccatcctgaatgacaatgaaaactttgtgctg
gatccatactctggagttataaagtccaatgtttcttttgatcgagaacagcagagctcc
tacacctttgatgttaaggcagtggatggagggcaacctcctcgctcttccacagcgaaa
gtaaccataaacgtcatggatgttaacgataacagccccgttgtcatctacccaccttct
aatacgtcttttaagctagtgccactctcagcaattccaggatccgtggtagctgaagtc
tttgctgtggatatagacactggaatgaatgccnnnnnnnnnngcacaattgtaagtgga
aataacaagggtttgtttcggattgatccagtgacaggtaatatcactctggaagaaaaa
ccaactcctaatgatgtggggctgcatcgcttagttgtcaacataagtgatttgggttat
cccaaatccttgcatactcttgtgcttgtatttttgtatgtaaatgatactgctggaaat
gcctcttatatttatgacttgatacgcaggactatggaaacacctttggaccggaacata
ggggacagtagccaaccctaccaaaatgaggactatctcacgatcatgatcgctattgtg
gcaggtgccatggttgtgatagtggtgatatttgtcacggttctcgttcgctgtcgacat
gcatccagattcaaagctgcccagaggagcaagcaaggtgctgagtggatgtctcccaat
caagagaacaagcaaaacaagaaaaagaaaaggaagaaaaggaaatctccgaagagctct
cttttgaactttgtgaccattgaggagtccaaacctgatgatgcagttcatgaacctatc
aacgggacaataagccttccagcggaactggaggagcaaagtataggaagatttgattgg
ggcacagcaccaccaacaacctttaagcctaacagtcccgatcttgccaagcattacaaa
tctgcctctccacagtctgcttttcatctcaaacctgatactccagtttcaatgaaaaag
caccatgtgattcaggaactcccgctggacaacacctttgttggtggttgtgacaccctt
tccaaacgnnnnnnnnnnnnnnnnnnnnnnntcagtgcctcagagtgcagttcccaagga
ggcttcaagacaaagggccccttacacaccagacaggtaaacgagcacttttactggcat
aatattccagcaatgcctcgcacttgccccagcagccgaggctggcggggatcagaaaat
gaaaaatcacattttgagtcccaacgccgtgttacatttcacctccccgatggctcccag
gaaagctgcagtgacagtggtctgggagaccacgagccggtgggtggtggaaccctgatc
tcacaccctctccctctggttcagccgcaggacgaattctatgaccaggcttcaccggac
aagaggactgaagctgatggcaattccgaccccaactcggatgggcctcttgggccacga
ggattagctgaagctacagagatgtgtactcaagaatgcctggttttgggtcactcagac
aactgttggatgcctcccagcttgggcccataccaacagccaaagtctcctctctccacc
tttgcacctcagaaagaatgggttaagaaggacaaactagttaatggacacacattgacc
aggacctggaaagaagatagcaacagaaaccagttcagtgaccgaaagcagtatggttcc
agtgagggccatttcaacactggcaaccacatgactgacattcctctggccaacttgaag
tcttataaacaggcctcaggagctgttgagagtccaaaggagcaccagctataa
DBGET
integrated database retrieval system
