Nipponia nippon (crested ibis): 104020776
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Entry
104020776 CDS
T05756
Symbol
PDGFRA
Name
(RefSeq) platelet-derived growth factor receptor alpha
KO
K04363
platelet-derived growth factor receptor alpha [EC:
2.7.10.1
]
Organism
nni
Nipponia nippon (crested ibis)
Pathway
nni04010
MAPK signaling pathway
nni04020
Calcium signaling pathway
nni04144
Endocytosis
nni04510
Focal adhesion
nni04540
Gap junction
nni04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
nni00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
104020776 (PDGFRA)
04020 Calcium signaling pathway
104020776 (PDGFRA)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
104020776 (PDGFRA)
09144 Cellular community - eukaryotes
04510 Focal adhesion
104020776 (PDGFRA)
04540 Gap junction
104020776 (PDGFRA)
09142 Cell motility
04810 Regulation of actin cytoskeleton
104020776 (PDGFRA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
nni01001
]
104020776 (PDGFRA)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
nni04090
]
104020776 (PDGFRA)
Enzymes [BR:
nni01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
104020776 (PDGFRA)
Protein kinases [BR:
nni01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
104020776 (PDGFRA)
CD molecules [BR:
nni04090
]
Proteins
104020776 (PDGFRA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
Ig_3
I-set
ig
Ig_2
VEGFR1-3_N_Ig-like
VEGFR-1-like_Ig-like
V-set
Ig_6
Motif
Other DBs
NCBI-GeneID:
104020776
NCBI-ProteinID:
XP_009472521
LinkDB
All DBs
Position
Unknown
AA seq
1087 aa
AA seq
DB search
MGTSPWMFLILGCFLTGPFLTFCQLPLPTIVPNRNEMVVQLNSNFTLKCSGDSEVSWQYP
VTEGSHRIDIRHEENNSGLFVTVLEVGNASAAHTGLYVCYYNHTQVEDGEVEGKDIYIYV
PDPDMPFVPSIPEDQFILVEEGDPTVIPCRTSDPSAQVTLINSLDKAVYAFYDSKQGFIG
NFPAGSYTCKTMVKGVEFKSDEFLIYILRATSQLPVEIEALKTVYKTGETIVVTCVVFDN
EVVNLQWNYPGKVKEKGLIKLDDIKVPSQKLVYTLTIPEASVKDTGDYECTARHATKEVK
ENKKVVITVHDKGFVHLEPQFSPLEAVNLHEVKNFVVDVQAYPAPKMYWLKDNVTLIENL
TEIVTSSNRVQETRFQSILKLIRAKEEDSGYYTLVAENEDEIKRYTFSLLIQVPALILDL
VDDHHGSAGGQTVRCLAEGTPLPDVEWLVCKDIKKCSNDTSWTLLTNNISDIHMEAHLDE
KNMVESQVTFQKVEETLAVRCVARNDLGAVTRELKLVAPTLRSELTVAAAVLVLLVIVII
SLIVLVIIWKQKPRYEIRWRVIESISPDGHEYIYVDPMQLPYDSRWEFPRDGLVLGRILG
SGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNL
LGACTKSGPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGMNPADESTRSY
VILSFENTGEYMDMKQADTTQYVPMLERKEGSKYSDIQRSVYDRPASYKKKSMSESEVKN
LLSDDSSEGLSLLDLLSFTYQVARGMEFLASKNCVHRDLAARNVLLAQGKIVKICDFGLA
RDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMM
VDSTFYNKIKSGYRMAKPDHATNEVYEIMVKCWNSEPEKRPSFYHLSEIVESLLPGEYKK
SYEKIHLDFLKSDHPAVTRMRGDCDNAYIGVTYKNEDKLKDRESGFDEQRLSADSGYIIP
LPDIDPVSEDELGKRNRHSSQTSEESAIETGSSSSTFIKREDETIEDIDMMDDIGIDSSD
LVEDSFL
NT seq
3264 nt
NT seq
+upstream
nt +downstream
nt
atgggtacttccccatggatgttcctgatcctgggatgttttctcacaggaccattccta
acattttgccagcttcctctgccgactattgttcccaataggaatgaaatggtggtacag
ctgaattccaatttcacactcaaatgctctggagacagtgaagtgagctggcagtaccca
gtgaccgagggaagccacaggatagacattagacatgaagaaaacaacagtggcctcttc
gtgacggtgcttgaagtaggaaatgcctcagctgctcatacgggcttgtatgtttgctat
tataaccacactcaagtggaggatggggaagtggaagggaaggacatctacatctatgtg
cctgacccagacatgccttttgttccttctataccagaagaccagttcatcctagtagaa
gaaggtgatcccaccgttatcccttgtcggacaagtgacccaagtgctcaagtgacttta
attaacagtttagacaaggctgtttatgctttctatgacagcaaacaaggcttcataggg
aatttccctgcgggctcatatacatgcaaaacaatggttaaaggcgtggagttcaagtct
gatgagtttctcatctatattttaagagctacttcacagctgccagttgaaattgaagct
cttaaaacggtctacaaaacaggcgagaccatcgtagtaacttgtgtggtctttgataat
gaagtggttaatttacagtggaattatcctgggaaagtgaaagaaaaaggtctgataaaa
cttgatgatatcaaagtcccatcgcagaagctggtttacaccttgaccattcctgaggca
tcagtgaaagacacaggggattatgaatgtactgctcggcatgcaaccaaggaggttaag
gaaaataagaaagtagtcattacagttcatgacaaagggtttgttcacctggagcctcag
tttagccctctggaagctgtcaatctacatgaagtcaaaaattttgttgttgatgtgcag
gcatacccagctccaaaaatgtactggttgaaggataacgtgactctgattgaaaatctt
actgagattgttactagttcaaacagagtccaggaaacaaggtttcagagcatattaaaa
ttgatccgggccaaggaagaagacagtgggtactatactttggttgctgaaaatgaagat
gagattaaaagatacaccttctccttgctaatacaagttccagccctaatcttagacctt
gtggacgaccaccatggctctgcaggggggcagacggtgaggtgcttggcggaggggacc
ccgcttcctgatgtggaatggctggtttgcaaggacattaaaaagtgcagcaatgacacc
tcatggactcttttgactaacaatatctctgatatacacatggaagcccacctggatgag
aaaaacatggtagaaagccaggtgaccttccagaaggtagaggaaaccctggctgtgcga
tgtgtggcaaggaatgaccttggtgctgttactcgggaactgaagcttgtggctcccacc
ttgcgatcagaactaacggtggctgctgcagtcttagtgctgttagtgattgtgataatt
tcactgattgtgctggtcatcatatggaaacagaagccgaggtatgagataagatggaga
gtcattgagtctatcagccctgatggccacgaatatatttatgtggacccaatgcaactg
ccttatgactccagatgggagtttcctcgagacgggttagtgcttggtcgaatccttggt
tctggtgcatttggaaaagtagttgaagggactgcatatggattgagtcgctctcaacca
gtgatgaaagtagctgtgaaaatgctgaaacctacagctagatccagtgaaaaacaggcg
ctcatgtctgaactgaagataatgacacatcttggcccccacctgaatattgtgaatctg
cttggagcttgtacaaaatcaggtcctatttacatcatcactgaatactgcttttacggt
gatttggtgaactatctgcataagaacagggacaatttcctgagccgacatccagagaaa
cccaagaaagatttggatatctttgggatgaacccagccgatgaaagcacaagaagttat
gtgatattatcatttgaaaacactggagaatacatggacatgaaacaagctgatacaact
cagtatgtgccaatgctggaaaggaaggagggatctaaatactctgatattcagagatct
gtatacgatcggcctgcttcatataagaagaaatctatgtcagaatcagaagtcaaaaac
cttctttcagatgacagttcggagggcctcagcctactggatttgctgagcttcacctac
caggttgcacggggaatggaatttttggcttctaaaaattgtgtgcaccgtgacttggca
gctcgtaatgtcctcctggctcaaggaaaaatagtgaagatctgtgactttgggctggct
agagacatcatgcatgattccaactatgtctccaagggcagcactttcctcccagtaaaa
tggatggcacctgaaagcatttttgacaatctgtacacaacattaagtgatgtctggtct
tatggcattctgctgtgggaaatattttctcttggtggcacaccataccctggcatgatg
gttgattctactttctacaataagatcaagagtggataccgaatggccaaacccgatcat
gctaccaacgaagtgtatgagatcatggtgaagtgctggaacagtgaaccagagaaaaga
ccttctttttaccatttgagtgaaattgtggagagcttgttgcctggagagtacaaaaag
agctatgagaagattcacctggacttcctgaaaagcgatcacccagctgtcacacgcatg
agaggggactgtgacaatgcttacattggtgtcacctacaagaatgaagacaagttaaag
gacagggagagcggatttgatgagcagagactgagtgctgacagcgggtacatcatcccc
ctgcctgacatcgaccctgtttctgaagatgagcttggcaaaaggaacaggcacagttcc
cagacatctgaagaaagtgccattgaaactggttccagtagctctacttttatcaagaga
gaggacgagaccattgaggacattgacatgatggatgacattgggatcgactcctcagac
ctagtggaggacagcttcctgtaa
DBGET
integrated database retrieval system
