Nipponia nippon (crested ibis): 104020893
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Entry
104020893 CDS
T05756
Symbol
SMC5
Name
(RefSeq) LOW QUALITY PROTEIN: structural maintenance of chromosomes protein 5
KO
K22803
structural maintenance of chromosomes protein 5
Organism
nni
Nipponia nippon (crested ibis)
Brite
KEGG Orthology (KO) [BR:
nni00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nni03400
]
104020893 (SMC5)
DNA repair and recombination proteins [BR:
nni03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
104020893 (SMC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_21
AAA_29
AAA_25
AAA_15
Motif
Other DBs
NCBI-GeneID:
104020893
NCBI-ProteinID:
XP_009472646
LinkDB
All DBs
Position
Unknown
AA seq
1041 aa
AA seq
DB search
MPYSERGEDLLCGLRVPTYDACEVRPGPNLNMIVGANGTGKSSIVCAICLGLAGKPSFIG
RADKVGLFVKQGCLKGVVEIELSKTPDNIIITREIQVVNNTSAWFINRKPTTLKTVEEQI
AALNIQVDNLCQFLPQDKVGEFAKLSKIELLEATEKSIGPPEMYQFHCELKNFREKEREL
ENLCKDKTNSLEKMKQRIERYKQDVERYHERKRHLDLIEMLERKRPWVEYENVRQQHEEV
KQRRDQAKEELKNLKEMQSPVTKKIQETEEYFKNLDMKIRDKAAEIKDISQKCKQKQDAL
EVKDKQIEEIHQALRMKKDEEMDRQRKIHNTHKMIEDWKNELNTMVVSENLQPETDAVNN
ELKKLQEERARIDSDISDLKAEKMNQERENKRIIDRLGQLNNIMNMKEENLKGRFQDTHS
ALLWLRKNKDKFQKKVCEPMMLEINVKDNRHAKYVENHISASDMRAFVFESQEDMEMFLV
EMRDRQKLRVNAVCAPAASCAESLSSRPIEELHRYGFFSYLRELFDAPHPVMSYLCSQYR
VHDVPVGTEKTRNMIERVIQETELKHIYTAEEKYIVKVSTYTNLRLSTNTSLRAAQFLTS
SVDTDERRHLENQQQDINNTLKSLDMRLTALFERQKHLERRDNELRQRKKELLERGNRRR
QLESKIGVKYDSLRQLEQDAINLEKESQQANVKIKEINSQKARLVTELMHLIKNCVSLNI
LKADLVLQSTTVAAEKNRLESEYKAASAQLRAAEQQFRELDDRKRVLTENCKELLKKARQ
VCKLSPDQHLPKEFQTAFQALXXXXXEIDAFLNEEKTRASCFTGLNASVVEEYNKQTQEI
QQLTEYLEEKKNELDNYKQNISQVKERWLNPLKKLIEQINEKFSNFFSSMQCVGEVDLHV
ENEEEYDKYGIRIRVKFHSSTELHELTPYHQSGGEKSVSTMLYLMALQELNRCPFRVVDE
INQGMDPMNERRVFEMVVKTACKESTSHLFFITPKLLQNLTYNDKMTVLFVYNGPFMLEA
NKWNLKAFCRRRRRLGRMDEQ
NT seq
3126 nt
NT seq
+upstream
nt +downstream
nt
atgccttactcggagaggggagaggacctgctgtgtggattacgagtcccaacatatgat
gcctgtgaagtacgtccaggacccaatctgaacatgattgtaggtgctaatggaacagga
aagtcaagcattgtttgtgccatctgcctgggactggctggaaaaccttctttcataggg
cgagctgataaggttggtctctttgtaaagcaggggtgcttgaaaggtgtagtagaaatt
gaactgtctaagacacctgacaatatcattatcacacgtgagattcaagtggtgaacaac
acatcagcatggtttatcaacagaaagccaacaaccctgaaaacagtagaagagcagatt
gcagccttaaacatccaggtggacaatttgtgccagtttcttcctcaggacaaagttgga
gaatttgcaaaactgagtaagattgagttgcttgaagccactgaaaaatccatcggtcct
ccagaaatgtaccaatttcactgtgaactgaaaaacttcagagaaaaggaaagagaactg
gagaacttgtgcaaagacaaaactaactctttggagaaaatgaaacagaggattgaacga
tacaaacaagatgttgagagataccatgagcgcaagcgccatctagacttaattgagatg
cttgagaggaaaaggccttgggtggaatacgaaaatgttcgtcagcagcatgaggaagtg
aaacaaaggcgagaccaagccaaggaagaactaaagaacctgaaagaaatgcagtcccca
gtgacaaaaaaaatccaagaaactgaagaatattttaagaatctggatatgaaaatcaga
gataaggctgctgaaatcaaagacatttctcaaaaatgtaaacagaagcaagatgctttg
gaggtgaaagataaacaaattgaagaaattcatcaagctttgagaatgaaaaaagatgaa
gaaatggacagacagaggaaaatacacaacactcacaaaatgatagaggactggaagaat
gagctcaatacaatggtagtctctgagaatcttcagccagaaactgatgctgttaataac
gagctgaaaaaattacaagaagaaagggcacgaattgatagtgatatcagtgatctaaaa
gcagagaaaatgaaccaagagagggaaaataaaagaataattgatcgccttggacaactt
aataatataatgaatatgaaggaggagaatctcaaagggagattccaagacacacattct
gctcttttgtggctaagaaagaacaaagacaagtttcaaaaaaaagtttgtgaacctatg
atgcttgaaatcaatgtgaaagacaatagacatgctaaatatgttgaaaatcacatttcg
gccagtgacatgagggcttttgtttttgagagtcaagaagatatggaaatgtttcttgtg
gagatgcgcgatcgtcagaaactaagagtgaatgctgtatgtgcacctgctgcatcatgt
gctgaaagcttatcttcaagacctattgaagaattacaccgatatggatttttctcatat
ttacgagagttatttgatgctcctcatcctgtgatgagttatctttgctcccagtaccgt
gttcacgatgtccctgtgggaacagagaagaccagaaacatgattgaaagggtcatacaa
gaaaccgaacttaagcacatatacacagcagaagaaaaatacattgttaaagtatctact
tacacaaacctaagactctctactaatacatccctgagggcggcacagtttctcactagt
tcagtggatacagatgaaagaagacacttggaaaaccagcaacaggacattaataacaca
ttgaagtcattggatatgcgtttgactgcattgtttgagagacagaaacatctggaacgc
agagacaatgagctcaggcaacggaagaaggagcttttagagagaggaaacaggaggaga
cagttggaatcaaaaattggtgtgaagtatgatagtttaagacagctggaacaagatgct
atcaacctagagaaagaatcgcaacaggcaaatgtaaagatcaaagaaataaatagccaa
aaagcaagacttgttactgaattaatgcatctcataaagaattgcgtatcactgaacatc
ctgaaagcagatttggttcttcagagcactacagtggctgctgagaagaacagactagaa
tcagagtataaagcagcaagcgcacagctaagagctgctgagcaacaatttcgtgaactg
gatgataggaagcgagttcttacagaaaactgcaaggaattgctgaaaaaagctcgacag
gtctgcaaactgagtccagatcaacatcttccaaaagaatttcaaactgcttttcaggct
cttnnnnnnnnnnnnnaggaaattgatgcttttctgaatgaagagaaaaccagggcctcc
tgtttcacaggcctgaatgcttcagttgttgaagaatacaataagcagacacaagaaata
cagcagttgacggaatatctagaggaaaagaaaaatgaattggataactataagcaaaac
atttcacaggtcaaagaaaggtggctaaaccccttgaaaaagctgattgagcaaattaat
gagaagttcagtaacttctttagttctatgcagtgtgttggtgaagtggatcttcatgtg
gaaaatgaggaggagtacgacaagtatgggattcgcattagagtgaaattccacagtagc
actgaacttcatgaattgactccatatcatcagagtggaggtgagaaaagtgtttccact
atgttgtacctgatggctctacaggaactcaacagatgtcctttcagggttgtagatgaa
ataaatcagggaatggatccaatgaatgagagaagagtttttgaaatggttgtgaaaact
gcttgtaaagaaagcacatctcatctcttctttattacaccaaagctcctgcagaatctc
acttacaatgacaagatgacggtgttgtttgtctacaatggaccttttatgttggaggca
aacaaatggaacttaaaggctttctgtaggcggcggcggcgacttggaaggatggatgaa
cagtga
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integrated database retrieval system
