Nipponia nippon (crested ibis): 104020921
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Entry
104020921 CDS
T05756
Symbol
NFKB2
Name
(RefSeq) nuclear factor NF-kappa-B p100 subunit
KO
K04469
nuclear factor of kappa light polypeptide gene enhancer in B-cells 2
Organism
nni
Nipponia nippon (crested ibis)
Pathway
nni04010
MAPK signaling pathway
nni04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
nni00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
104020921 (NFKB2)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
104020921 (NFKB2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nni03000
]
104020921 (NFKB2)
Transcription factors [BR:
nni03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
104020921 (NFKB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RHD_DNA_bind
RHD_dimer
Ank
Ank_2
Ank_3
Ank_5
Ank_4
Death
Motif
Other DBs
NCBI-GeneID:
104020921
NCBI-ProteinID:
XP_009472713
LinkDB
All DBs
Position
Unknown
AA seq
962 aa
AA seq
DB search
MAGHRGPVPEGGQAAGGSREQTPPCSRGKRSGPSGAPGVPGSASSYTLITLIFPPATQCL
DGVDYDDFNFSSHMMEQKEPLMETVEGPYLVIIEQPKQRGFRFRYGCEGPSHGGLPGASS
EKGRKTYPTVKICNYTGMARIEVDLVTHSDPPRVHAHSLVGKQCNEAGNCIAIVGPKDMT
AQFSNLGVLHVTKKNMMEIMKEKLKQQKMRNRSHVLTEAELREIELEAKELKKVMDLSIV
RLRFTAYLRDSSGNFTLALQPVISDPIHDSKSPGASNLKISRMDKTAGSVRGGDEVYLLC
DKVQKDDIEVRFYEDDENGWQAFGDFSPTDVHKQYAIVFRTPPYHKPKIDRPVTVFLQLK
RKRGGDVSDSKQFTYYPVVEDKEEVERKRKKVLPQFPQHFGGGSHMGGAGGGAGGFGSGG
GGNLSFPYSPGLAYNSIYSPGPHPVGGYQGGVQMKGPEVEGPGSDRQAPAESVYCKELQK
HAQLCQLWMLALAHRNAHALLDYSVTADPRMLLAVQRHLAASQDENGDTPLHLAIIHEQT
AVIKQLIEVIVSIPNQQIINISNNLQQTPLHLAVITKQPQVVQLLLQARADPTLLDRYGN
SLLHLALQTGDEEMLRTLLAHLGSATPCLLRLPNFQGFLPVHLAVKAKSLACLDLLVRKG
ADVNEVERQGGRTPLHLAVEMENLNMATHLVKKLGADVNSLTFARNTPLHLAAGLGSPTL
TKLLLKAGADVLCENDEPISPSSSEASSDTDGDPEEQELAMELEEPAPAVERGTNPEPPT
QGHGQAGHRQRRCHTPLDLTRSQKVREILLQASQQGPEVELPAAPCPGKVLSLDSEALQG
LGAPPAQDCSGSDWIELAKRLGLCSLVETYKDTPSPSVSLLRSYELAGGSLGGLLEALDS
MGLRKAVRMLHKTEALEKLQSTELKEDSAYGSESVEEEQAPALALKPGSGGELPHSQQPQ
VH
NT seq
2889 nt
NT seq
+upstream
nt +downstream
nt
atggcgggtcaccggggaccggtgcccgaaggggggcaggcggccggagggagccgggag
caaacccctccgtgctcccgggggaaacgctcgggaccttcgggcgctccgggggttcca
ggcagcgccagctcctacacactcatcacactcatcttccctcccgccacccagtgcctg
gatggggttgactacgacgacttcaatttcagctcccacatgatggagcagaaggagccc
ctgatggagacggtggaaggtccctaccttgtcatcatcgagcagccaaagcagcggggg
ttccggtttcggtatggctgcgagggcccttcacatggggggctgccgggagcatccagc
gagaaggggcgcaagacctatcccaccgtcaagatctgcaactacacagggatggctcgg
atcgaggtggacctggtgacgcacagtgaccctccccgtgtgcatgcccacagcctggtg
ggcaagcagtgcaacgaggccggcaactgcatcgcgattgtgggacccaaggacatgacg
gctcagttcagcaacctgggcgtgctccacgtcaccaagaagaacatgatggagatcatg
aaggaaaagctgaagcagcagaagatgcgtaacaggagccatgtgctgacggaagcggag
ctgcgtgagatcgagctggaggcgaaggagctgaagaaggtgatggacctgagcatcgtg
cggttgcgcttcactgcctacctccgtgacagcagtgggaacttcacgttggccctccag
cctgtcatctcagaccccatccatgacagcaagtccccaggagcttccaacctgaagatc
tcacggatggataagacggcaggctcggtgcggggaggggacgaggtctacttgctgtgt
gataaagttcagaaagatgacattgaggtgcgtttctatgaggatgatgagaacggctgg
caggccttcggggacttctcccccactgacgtgcacaagcagtatgccatcgtcttccgc
acacccccctaccacaagcccaagatcgaccgtcccgtcaccgtcttcctgcagctgaag
cgaaagcgggggggcgacgtgagcgactccaagcagttcacctactaccccgtggtggaa
gataaggaagaagtggagaggaagcgcaagaaagtcctgcctcagtttccccagcacttt
ggcgggggctcacacatggggggtgccggcggaggggccgggggctttggctctggagga
ggtgggaacctcagcttcccctactcccctgggctggcctacaacagcatctactcgccc
ggcccccatcccgtggggggctaccaggggggtgtgcagatgaaggggcccgaggtggag
gggcccgggagcgacaggcaggcacccgcggagagcgtgtactgcaaggagctgcagaag
catgcccagctctgccagctgtggatgctggcactggcacatcgcaatgcccacgccctg
ctcgactactcggtcactgccgatccccgcatgctgctggcggtccagaggcacctggct
gcatcacaggacgagaacggagacacgcctttgcaccttgctattatccatgagcagacg
gctgtgatcaagcagctgatcgaggtcattgttagcatccccaaccagcagatcatcaac
atctccaacaacctgcagcagacaccactgcatctagcagtcatcaccaagcagccccaa
gtggtccagctcctgctgcaagcccgcgctgaccccaccttgctggaccgctatggcaat
tccctgctgcacctggcgctccagacgggcgatgaagagatgctgaggacgctgctggcc
cacctgggctcggctaccccttgcctgctccgcctgcccaacttccagggcttcctgccc
gtgcacctggcagtgaaggcaaagagtctggcgtgcctggacctgctggtcaggaaggga
gcggacgtgaatgaggtagagaggcagggtgggaggaccccgcttcacctggctgtggag
atggagaacctgaacatggccacccacctggtgaagaagctgggagcagatgtcaatagc
ctgaccttcgccaggaacacccccctgcacctagctgccggcctgggctcccctaccctc
accaaactgctcctcaaagctggggcagatgtgctgtgtgagaatgacgagcccatcagc
ccatcctcgtcggaggccagcagtgacacagatggcgaccctgaggagcaggagctggcc
atggagctggaggagccggccccggctgtggagcgtggcaccaaccctgagccccccacg
caggggcacgggcaggcagggcacaggcagcgccgctgccacacgcccctggacctgact
cgaagccagaaggtgcgtgagatcctgctgcaggcctcccagcagggcccagaggtggag
ctgcccgctgccccgtgcccagggaaggtcctgtcgctggacagtgaggcgctgcagggg
ctgggggcgccgccggcccaggactgcagcggatcggactggatcgagctggccaagcgc
ctggggctctgcagcctggtggagacctacaaggacaccccctcacccagcgtcagcctc
ctgcgcagttacgagctggcagggggcagcctgggggggctgctggaggcgctggactcc
atggggctccgcaaggctgtgaggatgctccacaaaacagaggcactggagaagctgcaa
agcacagagctgaaggaagacagtgcctatggcagtgagtcggtggaggaggagcaggca
cctgcgctggccctgaagccggggtcggggggagagctgccccacagccagcagccacag
gtgcactga
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