Nipponia nippon (crested ibis): 104020947
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Entry
104020947 CDS
T05756
Symbol
PCDH20
Name
(RefSeq) LOW QUALITY PROTEIN: protocadherin-20
KO
K16498
protocadherin delta 1
Organism
nni
Nipponia nippon (crested ibis)
Pathway
nni03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
nni00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
104020947 (PCDH20)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
nni01009
]
104020947 (PCDH20)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
nni04515
]
104020947 (PCDH20)
Protein phosphatases and associated proteins [BR:
nni01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
104020947 (PCDH20)
Cell adhesion molecules [BR:
nni04515
]
Cadherins
Protocadherins
104020947 (PCDH20)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_CELSR2_9th
Cadherin_2
SGBP_BT4661-like
Motif
Other DBs
NCBI-GeneID:
104020947
NCBI-ProteinID:
XP_009472706
LinkDB
All DBs
Position
Unknown
AA seq
939 aa
AA seq
DB search
MPHSLLEVAVGRGGLPPASPPSLTPLPPHTPVSVSPQHLLLFLLFVGPFNCFASYSRATE
LFYSLNEGLPAGVLIGRPAGRLARDLRLPTAGGQRPAAPQPPLSFTLASRGMGGQYVQLD
NRSGELLTSAVEIDREALCVESSGATVFGEAAVVSSSFPSSESCLLLLDVLVLPQEYFRL
VKVKIAIRDVNDNAPRFPVPHIRLSVPENAPVNTRLAIEHPALDPDVGTNGVQTYRLRDN
YGVFTLDVEENESGERTPYLIVMGPLDRETREEYVTVIIAEDGGTPPLVGSATLTIGISD
INDNCPQFSDSQLNVTLYGNSSLGTHVATVHAVDRDLGSNAQITYSYSQKVSQPSRDLFH
LDESTGTITLSSKVDGDTPRLHRLIILGNGPGCIPAVITVLVTIIKVMTRPPEVVPRFIA
NEAEGVVYLKELEPVNTPIAFFTIKDPDEKYKVNCYLDGDGPFRLSPYKPYNNEYLLETT
KPLDYETQQLYEISVVAWNSEGFHVNKIIKVQVLDDNDNSPVFSQQLIELSIEENNVPNA
FLTKLHATDADSGERGQVSYFLGPDAPSYFSLDKTTGVLTVSTQLDREEKEKYRYTVKAV
DSGFPPRESIATVTITVLDKNDNSPRFINKDFSFFVPENFPGFGEIGVISVTDADAGQNG
WVALSVLNGSDIFVIDTGKGVLRAKVSLDREQQSSYVLWIEAVDGGDPALSSTAKITILL
LDINDNPPLVLFPQSNMSYLLVLPSTLPGSPITEVYAVDKDTGMNAVIAYSIIGRRGPRP
ESFRIDPKTGNITLEESLMQNDYGLYRLLVKVSDHGYPEPLHSTVMVNLFVNDTVSNESY
IESLLRKEPDISIEEKQPQISIEPTHKKMESASCMPTLVALSIISLGSIALVTGMGIYIC
LRKGKKQHRADENLEVQIPLNGRINLHMLEKKPMEISNI
NT seq
2820 nt
NT seq
+upstream
nt +downstream
nt
atgccgcactccctgctcgaagtggcagtgggcaggggggggctgcctcctgcctcccct
ccttctctaacaccactgcctccccacacccctgtgtctgtctctccccagcacttgctc
ctcttcctgctcttcgttggacctttcaactgctttgccagttacagccgtgccaccgag
ctcttctacagcctcaacgaggggctgcccgccggagtgctcatcggcaggccggccggg
cgcctggcccgtgacctgcggctgccgacggctggtgggcagcgccctgcggccccccag
cccccgctctccttcaccctggcctcccgtggcatgggaggacagtatgtgcagctggac
aaccgctccggagagctgctcacctcagccgtggagatcgaccgggaagctctgtgcgtg
gagagcagtggggccactgtctttggggaagcagctgttgtctcctcctccttcccctca
tccgagtcatgcctgctgctgctggatgtgctggtgctgccacaggagtacttccgcctg
gtgaaggtaaaaattgctatccgggatgtcaacgacaatgcaccccgcttccctgtgccc
cacatccgcctctcggtgcccgagaatgcacctgtgaacacccgcctggctatcgagcac
cccgcccttgaccccgatgtgggtaccaacggtgtccagacctaccgcctgcgagataac
tacggtgtcttcacccttgatgtggaggaaaatgagagcggggagaggactccctacttg
attgtcatggggcctctggacagggagacacgggaggagtatgtcacagtcatcattgct
gaggatggggggactcctccgcttgtgggcagtgccaccctcactattggtatcagtgac
ataaatgacaactgcccccagttcagcgactcgcagctcaacgtcactctttatgggaac
tccagtctagggacacatgtggccactgtccacgcagtagatagggaccttggatccaat
gcccagatcacctactcctacagccagaaggtctcccagccatccagagacttgttccat
ctggatgaaagcacaggaaccatcacgctctccagtaaagttgatggggacactccaagg
ctccacaggctgatcatactgggcaacggtcctggttgtatccctgccgtgatcacagtg
ctagtgaccatcatcaaagtcatgacgaggccgcctgaagttgtccctcgtttcatagct
aatgaagcagaaggtgtggtgtacttaaaggaactggagcctgtcaacacaccaatagca
ttttttaccatcaaagaccctgatgaaaaatataaagtcaattgctatttggatggtgat
gggcctttcagactttcaccatacaagccatacaataatgaatacctgttagagaccaca
aagcctttggactatgagacacagcagctgtatgaaatctctgtagttgcgtggaactca
gaaggatttcacgtcaacaaaataatcaaagtacaggttctggatgacaacgacaactcg
ccagttttctctcaacagctgatagaattatccattgaggagaacaatgttcccaatgct
ttcttgaccaaactgcatgctacagatgctgacagcggagaaagagggcaagtgtcctat
tttttagggcctgatgccccttcctatttttctttagataaaaccacaggagttcttaca
gtttccacccaactggacagagaagaaaaagagaaatacagatatactgtcaaagcagta
gattctgggttccctccaagagaatcaatagcaactgtcaccatcactgtattggataaa
aatgataatagtccaagatttatcaataaggattttagctttttcgtgccagaaaacttt
ccaggttttggtgaaattggagttataagtgtcacagatgctgatgcagggcaaaacgga
tgggttgccctttcagttctgaatggaagtgatatttttgtcatagatactggcaaagga
gttttgagagctaaagtctcactggacagggagcagcaaagctcctatgttctgtggatc
gaagcagttgatggtggtgatcctgccctctcctctactgcaaaaataactatccttctt
ctggacataaatgacaacccccctttggtcttgtttcctcaatctaacatgtcttatttg
ttggtccttccttctacccttcctggctctcccatcactgaggtctatgctgtcgataag
gacactggcatgaatgcagtcatagcttacagcatcataggaagaagaggccctcgaccg
gagtcatttaggattgaccctaaaactggtaatatcaccttggaagagtcactgatgcaa
aatgactatggcctctaccggctgcttgtaaaagttagtgatcatggctatccagaacct
ctccattccaccgtcatggtgaaccttttcgtcaatgacactgttagcaatgagagctac
attgaaagtttgttaagaaaggagcctgatatcagtatagaagaaaagcagccgcaaata
tccatagagcctacacataaaaaaatggagtcagcatcctgcatgcctaccttggtagct
ctgtcaataataagcttgggttcaatcgctttagtaacagggatgggcatttacatctgt
ctaagaaaaggaaaaaagcagcacagagcagatgaaaacttggaagtacaaatcccatta
aatggaagaattaacctgcacatgttggagaagaaaccgatggagatttctaacatttga
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