Nipponia nippon (crested ibis): 104021017
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Entry
104021017 CDS
T05756
Symbol
PNN
Name
(RefSeq) pinin
KO
K13114
pinin
Organism
nni
Nipponia nippon (crested ibis)
Pathway
nni03013
Nucleocytoplasmic transport
nni03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
nni00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104021017 (PNN)
03015 mRNA surveillance pathway
104021017 (PNN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nni03019
]
104021017 (PNN)
03041 Spliceosome [BR:
nni03041
]
104021017 (PNN)
Messenger RNA biogenesis [BR:
nni03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
104021017 (PNN)
Spliceosome [BR:
nni03041
]
Complex C
Other components
EJC/TREX
104021017 (PNN)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pinin_SDK_N
Pinin_SDK_memA
Motif
Other DBs
NCBI-GeneID:
104021017
NCBI-ProteinID:
XP_009472783
LinkDB
All DBs
Position
Unknown
AA seq
660 aa
AA seq
DB search
MRPRPPQNRLLAITGPGGGRGRGSLLLRRGFSDSGGGPPAKQRDLEGAASRLGGERRTRR
ESRQESDAEDDDIKKPALPSSVVATSKERTRRDLIQDQNMDEKGKQRNRRIFGLLMGTLQ
KFKQESTVATERQKRRQEIEQKLEVQAEEERKQVENERRELFEERRAKQTELRLLEQKVE
LAQLQEEWNEHNAKIIKYIRTKTKPHLFYIPGRMCPATQKLMEESQKKMNALFESRRNEF
AEQINKMEARPRRQSVKEKEQQEVQNEEKKEEQNKEQEEGKVAQQVEELETGNQHNDVEM
EEVGEEKGKIGSGHSDAEKEQEEDEQKHEMEIKVEETTEVRENDKQQDGQHEEVTVAKEE
SENIQPVDNEQDVAEMNEADSIEPVENENGKEVEPETECDAQSEKVCNVPSPEKEKGIKP
EMKAEPEEKQEKAPEAQPEPVAEALSQPQSVPLPQSPQLSQSTQDTEPQADKDENAVVSV
KVVEAQTEQSQTPSVEIKSKTRSRSRGRAGNKTGKSHSRSSSSSSSSSTSSSTTTGSSSS
TGSSSSRSSSTSSSTTSGSTSRDSSSSSSSSSESRSRSRGRGHNNRDRKRRRSTDRKRRD
PSGVDRSHKSSKGGSRDAKSSKDKSSRSDRKRSISESSRSGKRTSRSERDRKSDRKDKRR
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcctaggccccctcagaacagactgttagccatcacaggccctggtggaggtaga
gggcgtgggagcttattgctaaggcgtggattctcggatagtggaggaggacccccagcc
aaacagagggatcttgaaggggcagccagtaggctgggtggagaacgtcggacaagaaga
gaatcacgccaggaaagcgacgcagaggatgatgatattaaaaagccagcgttgccatct
tctgttgttgctacctccaaagagcgaacacgtcgagaccttatacaagatcaaaatatg
gatgagaaaggaaaacaaaggaatcgacgtatatttggcctgttgatgggcactcttcaa
aaatttaagcaggagtccacggttgctactgagaggcaaaagagacgacaagaaattgaa
caaaaacttgaagtgcaggcagaggaagaaagaaagcaggttgaaaatgagagacgagaa
ctgtttgaagaaagacgtgctaaacagacagagctgcggttactggagcaaaaggttgag
cttgctcagttgcaagaagaatggaatgaacataatgctaaaataattaaatacataaga
acgaagacaaaaccccatttattctacatacctggcagaatgtgtcctgctacgcagaag
ttgatggaagagtcacagaaaaagatgaatgcactctttgaaagcaggcgaaatgaattt
gcagagcagattaacaaaatggaggccaggcccagaagacaatctgtgaaggaaaaagaa
cagcaggaggtgcagaatgaagaaaagaaggaagaacagaacaaggagcaggaagagggt
aaggtggctcagcaggtggaagagttggagacaggtaatcagcacaatgatgtagaaatg
gaggaggtaggggaggaaaagggaaaaataggttcagggcatagcgatgcagagaaagag
caggaagaggatgaacaaaaacatgaaatggagattaaagtagaagagactaccgaggtg
agggagaatgacaagcaacaggatggtcagcatgaagaggtcacagttgcaaaagaggaa
agtgaaaacattcagccagtggataatgagcaggatgtggctgaaatgaatgaggcagat
agcatagaacctgtagaaaatgaaaatggcaaagaagtggaaccagaaacagagtgtgat
gctcagtcagaaaaagtgtgtaatgttccttctcccgagaaagagaaaggtattaaaccg
gaaatgaaagctgaacctgaagaaaaacaggagaaggcacctgaagctcagccagaacct
gtggctgaggctctgtctcagccacagtctgtgccactgccacagtcacctcagttgtct
cagtccactcaggatacagagccccaggcagacaaggatgaaaatgctgtggtgtctgta
aaggtggtcgaggcacagacagagcagagtcagacaccaagtgtagaaattaagagtaag
actaggagtagaagcaggggtagggcagggaacaaaactggtaagagtcatagccgtagt
agcagcagcagtagtagcagtagtacttcgagcagtactactactggaagtagttccagc
actggcagcagtagcagtcggagtagttccaccagcagcagcactacaagtggaagtact
agcagggacagtagcagcagtagctctagcagtagtgaaagtagaagtcgaagccgagga
agagggcataataacagagatagaaaacgcagaaggagcacagacaggaagcgaagggat
ccttcaggagtagatagaagtcacaagtcctcaaaaggtgggagtagagatgccaaaagc
tcaaaggataaaagttcaagatctgacagaaagaggtctatatcagaaagtagtcggtca
ggcaagagaacttcacggagtgaaagagaccgtaaatcagacaggaaagacaaaaggcgt
taa
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