Nipponia nippon (crested ibis): 104021798
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Entry
104021798 CDS
T05756
Symbol
CDKAL1
Name
(RefSeq) threonylcarbamoyladenosine tRNA methylthiotransferase
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:
2.8.4.5
]
Organism
nni
Nipponia nippon (crested ibis)
Brite
KEGG Orthology (KO) [BR:
nni00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nni03016
]
104021798 (CDKAL1)
Enzymes [BR:
nni01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
104021798 (CDKAL1)
Transfer RNA biogenesis [BR:
nni03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
104021798 (CDKAL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
Styelin
Motif
Other DBs
NCBI-GeneID:
104021798
NCBI-ProteinID:
XP_009473675
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All DBs
Position
Unknown
AA seq
581 aa
AA seq
DB search
MPAACDSVLEDIEDIVSAEDLKPHDRQFVRKNVFPKVRKRNSQKNVQADDDPPSDSIIPG
AQKIWIRTWGCSHNNSDGEYMAGQLAAYGYKITDNSAEADLWLLNSCTVKNPAEDHFRNS
IKKAQEGKKKVVLAGCVPQAQPRQDYLKGLSIIGVCLDRVVEVVEETIKGHSVRLLGQKK
DNGKRLGGARLDLPKIRKNPLIEIISINTGCLNACTYCKTKHARGDLASYPIQELVDRAK
QSFQEGVCEIWLTSEDTGAYGRDIGTDLPTLLWKLVEAIPEGAMLRLGMTNPPYILEHLE
EMAKILNHPRVYAFLHIPVQSASDSVLMDMKREYCVADFKQVVDFLKEKVPGITIATDII
CGFPGETDEDFQETMKLVEQYRFPSLFINQFYPRPGTPAAKMHQVPAAVKKQRTKDLSQL
FHSYNPYDHKVGERQRVLVTEESFDSNYYVAHNPFYEQVLVPKDPLLMGKMVEVNIYEAG
KHFMKGQPVSDARVYTASITRPLAKGEVSGLTEEFRHAPQNGTNWKAHPSAEIPGKTPLC
SWMALQFPWQREGGGLKILSVSLALLAVLVMFYYGGMKTEL
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atgcctgctgcctgtgattcagtgcttgaagatattgaagatattgtgtcagcagaagat
ttgaaacctcatgatcggcagtttgtaagaaagaatgtttttccaaaagtgcgaaaacgc
aattcacaaaaaaatgttcaggcagatgatgatcccccaagtgacagcattattcctggt
gctcagaaaatctggattcgtacatggggatgttctcacaataattccgatggtgaatat
atggctggacagctggctgcatatggatacaaaattacagacaactctgctgaagcagat
ctatggttgctgaacagttgtacagtaaaaaatcctgctgaggatcacttcagaaactca
atcaagaaagcccaagaagggaagaagaaagtggttctagcaggctgtgtgccacaagcc
caacctcgtcaggactacctgaaaggcttgagtattataggggtatgtttagatcgtgta
gtagaagttgtggaggaaactattaaaggtcattctgtgagactgctgggtcagaaaaag
gataatggaaagcgtttggggggagcacgactggatttgccaaagattaggaagaatcca
ctgatagaaatcatttccatcaatacagggtgtctcaatgcatgcacctactgcaaaact
aagcatgccagaggagatctagcaagttatccaattcaagaactagtggacagagccaaa
cagtcttttcaagagggtgtttgtgagatatggctgaccagtgaagatacaggggcttat
ggcagagacattggcacagacctccctacgcttctgtggaagctggttgaagctattcct
gagggagctatgctgaggcttggcatgacaaaccctccctatattttagagcatctggag
gaaatggcgaagattctcaatcatccaagagtatatgcttttctgcacataccagtgcag
tcagcctctgacagcgtgctcatggacatgaaaagagaatactgcgtggcagacttcaaa
caagtagtggatttccttaaagaaaaagtgcctggaataacaattgctacagacatcatc
tgtggttttccaggagagacagatgaagattttcaagaaacaatgaaacttgtagaacag
tacaggtttccgagcttgttcattaatcaattttacccacgcccaggaacgccagctgca
aaaatgcatcaagttccagctgcagtgaaaaaacagagaacaaaggatctgtcccagctg
tttcattcatacaatccatatgatcataaggttggtgagaggcagagggttctggtaaca
gaagaatcctttgattccaattactatgttgctcacaatcctttctatgagcaggttctt
gtgccaaaggatcctctgttaatgggtaagatggtagaagtgaatatttatgaagctggg
aaacattttatgaagggccaaccagtgtcagatgccagagtttacactgcatccatcacc
agaccgttagcaaaaggagaagtttctggtttaacagaggagttcagacatgcaccacag
aatggcacgaactggaaagcacacccttctgctgagatcccagggaaaacaccgctctgc
tcatggatggctttgcagttcccatggcaacgagaaggaggtggactgaagatactgtct
gtcagcctggctctactggcagttcttgttatgttttactatggaggaatgaaaacagaa
ctgtga
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