Nipponia nippon (crested ibis): 104021987
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Entry
104021987 CDS
T05756
Symbol
RIMS1
Name
(RefSeq) regulating synaptic membrane exocytosis protein 1 isoform X1
KO
K15291
regulating synaptic membrane exocytosis protein 1
Organism
nni
Nipponia nippon (crested ibis)
Pathway
nni04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
nni00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
104021987 (RIMS1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nni04131
]
104021987 (RIMS1)
Membrane trafficking [BR:
nni04131
]
Exocytosis
Calcium ion-dependent exocytosis
Acrosomal exocytosis proteins
104021987 (RIMS1)
Small GTPases and associated proteins
Rab associated proteins
104021987 (RIMS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
C2
RIM2a_ZnF
PDZ
FYVE_2
PDZ_6
Zn_ribbon_Nudix
Motif
Other DBs
NCBI-GeneID:
104021987
NCBI-ProteinID:
XP_009473911
LinkDB
All DBs
Position
Unknown
AA seq
1671 aa
AA seq
DB search
MSSSVGPRGPRPPTVPPPMQELPDLSHLTEEERNIIMAVMDRQKEEEEKEEAMLKRLHQQ
FESYKEQVRKIGEEARRYQGEHKDDAPTCGICHKTKFADGCGHLCSYCRTKFCARCGGRV
SLRSNNEDKVYRNTVPTHCGSHSTVPVRVMWVCNLCRKQQEILTKSGAWFFGSGPQPSPS
QDGTLSDTATGGSSDAPREKKARLQERSRSQTPLSTATASSQEISSSSVQSDRRKGAEVS
QPAMGLDQKQVSSRSRSEPPRERKKTILLSDQNGKGLKSERKRVPKSSLQKEGPADDRER
KERHEGRRLEKGKSQDYPDLPEKLEEGKVPDDEKQRKEDECHTRYRSDPNLARYPVKPHP
EEQQMRMHAKVSKARHERRHSDVALPHTEMEEAEVPENKLGKRSQLQGTQDRKSLVETQR
SYSIDRTGDVRISVSKQLTNHSPPTPRHSPVPIEHVEYKNHDSFKKQSRLDPSSAILMRK
AKREKMETMLRNDSLSSDQSESVRPSPPKPHRAKRGGKKRQMSVSSSEEEGASTPEYTSC
EDVEIESESVSEKGDLDYYWLDPATWHSRETSPISSHPVTWQPSKEGDRLIGRVILNKRT
TMPKESGALLGLKVVGGKMTELGRLGAFITKVKKGSLADVVGHLRAGDEVLEWNGKPLPG
ATNEEVYNIILESKSEPQVEIIVSRPIGDIPRIPETSHPPLESSSSSFESQKMERPSISV
ISPTSPGALRDAPQVLPGQLSVKLWYDKVGHQLIVNVLQATDLPPRVDGRPRNPYVKMYF
LPDRSDKSKRRTKTVKKSLEPKWNQTFLYSHVHRRDFRERMLEITVWDQPRVQEEESEFL
GEILIELETALLDDEPHWYKLQTHDESSLPLPQPSPFMPRRHVHGGESTSKKLQRSRPIS
DSDISDYDVDDGIGVVPPVGYRTSTRESKSTTLTVPEQQRTTHHRSRSVSPHRGDDQGRT
RSRLPNVPLQRSLDEIHQMRRSRSPTRHHDASRTPVDYRSRDMDSQYLSDQESELLMLPR
AKRGRSAECLHTISSTLPACAKTKSVIRQDISLLRDCLNSQIPKFGDDLLVSELQPSLDR
ARSASTNCLRPDTSLHSPERERGRWSPSLERRRPTSPRIHIQHASPEDDRQSRKVERYSS
QKQTRKASATETERGLLPCLSRRGLPTPRTTEQPVIRGKHQARSRSSEHSSIRPLCSVHH
LAPGGSAPPSPLLTRIHQQGSPTQSPPADTSFSSRRGRQLPQVPVRSGSIEQEQETFNSS
TKASLVVEERTRQMKMKVHRYNQTSGSGSSQEHEREQYTKYNIQTDQYRSCDNVSAKSSD
SDVSDVSAISRTSSASRLSSTSFMSEQSERPRGRISTFTPKMQGRRMGTSGRITKSTSVS
GEMYKLEHNDGSQSDTAVGTVGTGGKKRRSSLSAKVVAIVSRRSRSTSQLSQTEAGSKKL
KSTIQRSTETGMAAEMRSRMVRQPSRESTDGSINSYSSEGNLIFPGVRLGADSQFSDFLD
GLGPAQLVGRQTLATPAMGDIQIGMVDKKGQLEVEVIRARGLTQKPGSKSTPAPYVKVYL
LENGACIAKKKTRIARKTLDPLYQQTLVFDESPQGKVLQVIVWGDYGRMDHKCFMGVAQI
LLEELDLSSVVIGWYKLFPPSSLVDPTLTPLTRRASQSSLESSTGPPCIRS
NT seq
5016 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcttcggtggggccccgcggccctcgcccgcccacggtgccccccccgatgcag
gagctgcccgacctgagccacctgacagaggaggagaggaacattatcatggcagtgatg
gaccggcagaaagaagaggaagagaaagaagaggccatgctcaagaggttgcatcaacaa
tttgaaagctataaagagcaagtaagaaagataggggaagaagcccgccgttaccaggga
gagcacaaggatgatgctccaacatgtggaatctgtcataaaacaaagtttgcagatggt
tgtggccatttatgctcttattgccggaccaagttttgtgctcgatgtggaggtcgtgtc
tctctgcgatcaaacaatgaggacaaagtgtacaggaatactgttcctactcattgtgga
tcacattcaacagtacctgtaagagttatgtgggtatgcaatttatgtcgaaagcaacaa
gaaatcctaacgaaatccggagcgtggttttttggaagtggaccacagccctcacccagc
caggacggaacactgagtgatacagcaactggtggaagctcggatgcaccgagagaaaag
aaagcaagacttcaagagcgatcgagatcacagactcccttaagtacagcaactgcctca
tcacaggaaatctcttcttccagtgttcagtccgaccggaggaaaggagcagaagtatca
cagccggctatgggcctggaccaaaagcaagtttcatcaaggtctagaagtgaacctcca
agagagaggaagaagacaatattgctttcagaccagaatggcaaaggtttaaagagtgag
cgtaagcgcgtgccaaaatcatcacttcaaaaagaaggaccagcagatgacagggagcgt
aaagaacggcatgaaggtagaaggcttgagaaaggcaagtcacaggactacccagacttg
ccagagaaacttgaggaaggcaaagtgcctgatgatgaaaaacaaaggaaggaagatgaa
tgtcatacccgttacaggagtgaccccaatctggcaaggtatcctgtaaaaccacatcct
gaggaacagcagatgcgcatgcatgcaaaagtttctaaagcacggcatgagagaagacac
agtgatgtagctttgccacatacagaaatggaggaagcggaggtacctgagaataaatta
ggaaaacgctcacaattacagggaactcaggacagaaaatctcttgtggaaactcagagg
tcgtactctatagacagaacaggtgatgtaagaatttctgtttctaaacaattaactaat
catagcccaccaactcccaggcatagtccagttcctatagaacacgtagaatacaagaac
cacgattcctttaaaaaacagagccgccttgatcctagctctgctattctcatgcgaaaa
gcaaagcgggaaaaaatggagaccatgctaaggaatgattcccttagctctgaccagtcg
gaatcagtgcggccatcccctccaaagcctcatagagcaaaaagaggcggaaagaaaagg
cagatgtcagttagtagctcagaggaagaaggggcatcaacaccagaatatactagctgt
gaagatgtggagatagaaagtgaaagtgtcagtgaaaaaggtgacttggattattactgg
ctggatcctgccacgtggcacagcagggagacatcccctattagttcgcatccagtaacg
tggcagccttctaaagagggagatcgcttaattgggcgtgttattcttaacaagagaaca
accatgccaaaagaatcaggtgcattgttggggctaaaagttgttggaggaaaaatgaca
gaattgggacgactcggtgccttcattaccaaagtgaagaaaggtagcttggctgatgtg
gtggggcatctcagagcaggggatgaagttctagaatggaatggtaaacccttgcctgga
gctacaaatgaagaagtttacaacattattttagaatcaaaatcagaacctcaagttgaa
attattgtttcaaggcctattggtgatattccacggattcccgagacttctcaccccccg
ttagagtctagttcaagttcttttgaatctcagaagatggaaaggccttccatttctgtt
atatctccgaccagccctggagccctacgagatgcaccacaagtcctaccagggcagctt
tctgttaaactgtggtacgacaaagtgggacatcagttaatagtaaatgttctgcaagca
acagacttgccaccaagagtagatggacgccccaggaatccctatgtaaaaatgtatttt
cttccagacagaagtgataagagtaaaaggaggaccaaaacagtaaagaaaagtctagag
ccaaaatggaaccaaacttttctctactcacatgtacatcgtagagattttagagaacga
atgcttgaaataaccgtatgggatcagccaagagtacaagaagaagagagtgaatttctt
ggagagattcttatagagctggagacagcacttttagatgatgaaccacattggtataag
ctacagacacatgatgaatcttcactacctctgcctcagccatcacctttcatgccaaga
cgacatgttcatggtggagaaagcactagcaaaaaattacaaagatctcggccaatcagt
gatagtgacatctcagattatgatgttgatgatggtattggagttgttcctccagtaggt
tatagaactagtactagagaaagtaaatctacaacgctaactgtgccagaacagcaaaga
acaacacatcatcgttcacgatctgtatctcctcaccgtggcgacgatcagggcaggacc
cgttcacgtttaccaaatgtgccattacagaggagtttagatgaaattcatcaaatgaga
agatcacgttctccaactagacaccatgatgcctccagaactccagttgattatagatcc
agagacatggatagtcagtatttgtctgatcaagaaagtgagcttcttatgctgcccaga
gcaaaacgaggaagaagtgcagagtgcctacataccatcagctcaactcttcctgcatgc
gctaagaccaaatcagtgattagacaggatatttcactccttcgtgattgccttaattca
caaataccgaaatttggagacgatctgctggttagtgaactacagccctcccttgacagg
gctaggagtgctagtaccaactgcttgagaccagatactagtttgcattcaccagaacga
gaaaggggtagatggtccccctccctagagaggagacgacctactagtcccaggattcat
atccagcatgcatctccggaggatgacaggcagtccagaaaagtggaaagatatagcagc
caaaaacaaactaggaaagcctccgcaactgaaacagaaaggggtctgctaccatgtctt
tctagaaggggacttccaaccccacgaacaactgaacagccagtcattaggggaaaacat
caggctcgctcaaggtcgagtgagcactctagtatcagacccttatgctctgtacatcac
ctagcgcccggagggtcggcaccaccttctccacttctgacaagaatacatcaacaagga
agtcccacacagtctcctcctgcagacacatccttcagcagtcgcaggggaagacagcta
ccgcaagttccagtaagaagtggcagtatagagcaagagcaagagacttttaactcttcc
acaaaagcaagcttagtagtggaggaacgaacaagacagatgaaaatgaaagtgcaccgt
tataatcagacgtcagggtctggttctagccaagaacatgagcgtgagcaatataccaag
tataatatacaaacagatcagtacagaagttgtgataacgtctctgccaaatcatcagat
agtgatgtcagtgatgtgtcagccatttcccgaaccagcagtgcctcacgcctcagcagc
acaagttttatgtcagagcaatctgaacgccctcggggcagaatcagtacatttactcct
aaaatgcaaggcagacggatggggacttcagggagaatcactaagagcacaagtgtgagc
ggagagatgtataagctggagcacaatgacgggagtcagtcggacacggctgtcggcacg
gttggaacaggtgggaagaaaaggcgttccagccttagtgccaaagtggttgccatagtg
tctcgaaggagcagaagcacatctcaacttagccaaacagaggctggcagcaagaagcta
aagagcacgatacagagaagcacagagacaggaatggcagcagagatgagaagtcgtatg
gttcgacagccaagtcgggaatccactgacggcagcataaatagttacagctccgagggc
aacttaatatttcctggagtacggctgggcgctgacagtcagtttagtgatttcctcgat
ggacttggacctgcacagttagtaggccgacaaacactagcaacccctgccatgggtgac
atccagattggaatggtggataaaaagggccagttagaagtagaagtcattagagcccgt
ggcctcacacaaaaacctggctccaaatctaccccagctccgtatgtcaaagtgtattta
ttggaaaatggagcatgtatagctaagaagaagacaagaattgcacggaagacccttgat
cctttgtaccaacagacactggtttttgatgaaagtccacagggtaaagttcttcaggta
atagtttggggagactacggccgaatggaccacaaatgcttcatgggagttgcccagatc
cttctggaggaactggatctgtccagtgtggtaataggctggtataaattatttccacct
tcgtcactagtggatccaaccttgactcccctgacacgcagggcttcccagtcatctctg
gaaagttcaactgggcctccctgcattagatcatag
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integrated database retrieval system
