Nipponia nippon (crested ibis): 104022037
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Entry
104022037 CDS
T05756
Symbol
DDX43
Name
(RefSeq) probable ATP-dependent RNA helicase DDX43
KO
K17043
ATP-dependent RNA helicase DDX43 [EC:
5.6.2.7
]
Organism
nni
Nipponia nippon (crested ibis)
Brite
KEGG Orthology (KO) [BR:
nni00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nni03041
]
104022037 (DDX43)
Enzymes [BR:
nni01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
104022037 (DDX43)
Spliceosome [BR:
nni03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
104022037 (DDX43)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
KH_1
MOEP19
ResIII
SNF2-rel_dom
KH_2
Mur_ligase_C
Motif
Other DBs
NCBI-GeneID:
104022037
NCBI-ProteinID:
XP_009473965
LinkDB
All DBs
Position
Unknown
AA seq
638 aa
AA seq
DB search
MNWTPLFHLHLHEQMVAPPLSPEGVSGRTERWPALPGQIPYGNRAVGFADNLSHGNLRPP
GAAAGQAQDAMMPLCFHLDSALVGALIGRGGTKIRELEDSSGSRIKVIKGTYEAEVKIFG
SVAVQNKAKMLIDDAVTRSGQNYSRGKTWDVIEPEDNPKKSVINWASLRENKAKYEAMKW
AGLPPVEKNFYKESSRTASMSQEEVELWRKENNNIICDDLKEGEKRCIPNPVCKFEDVFE
HYPDVMANIRKVGFQKPTPIQSQAWPIILQGIDLIGIAQTGTGKTLAYLMPGFIHLTSQP
ISKDQRGGPGMLVLAPTRELALQVEAECLKYAYKGIKSICVYGGGDRKGQIDVVTKGVDI
VIATPGRLHDLQMNNFINLKSITYLVLDEADRMLDMGFEPQIMKILIDVRPDRQTVMTSA
TWPDGVRRLAKSYLKNPMIVYVGTLDLAAVNTVEQRVIVIAEEEKRAFMQYFIDSMKPKD
KVIIFVGKKLTADDLASDFGLQGIPVQSLHGNREQCDREQALDDFKKGKVRILVATDLAS
RGLDVHDITHVFNFDFPRNIEEYVHRVGRTGRAGRTGEAVTLVTKNDWRVAPELIEILER
ANQVVPNELIAMAERYKQFQIRKETEKDIRRPQRKPSK
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgaattggactccactcttccaccttcatctgcacgagcagatggttgcacccccattg
agcccggaaggcgtcagtgggagaactgagcgttggccggccctgcctggacagattccg
tacggaaacagggccgtgggttttgctgataatttatctcacggaaacttgcggccgccc
ggagccgccgccggccaagctcaggacgccatgatgcccctctgcttccacctggacagc
gcactggttggggctctcataggtcgaggcggaactaaaataagagaacttgaggattct
tcgggttccaggataaaggttataaagggaacctatgaagctgaagtaaagatttttggc
agcgttgctgtgcaaaacaaagccaagatgttgattgacgatgctgttacaagatctgga
caaaactacagtagaggaaaaacttgggatgttatcgagcctgaagataacccaaagaaa
tcagtgattaactgggcctctcttcgagaaaacaaagctaaatatgaagctatgaagtgg
gcaggcttgcctccagttgagaaaaacttctataaagaatcatcaaggactgcatctatg
tcacaagaagaagtggaactgtggcgaaaagaaaataataatataatttgtgatgactta
aaagaaggtgaaaagcgctgcattcccaatcctgtttgtaaatttgaagatgtatttgag
cattatcctgatgttatggctaatataagaaaagttggctttcaaaaacctacaccaatt
cagtcccaggcatggccaatcatactccaaggaattgatcttattggtatagcacagact
ggtaccgggaagacattagcgtacttaatgcctggattcattcacttgacttcacaacca
atatccaaagatcagcgtggggggccaggaatgctagtccttgctcccactcgagaactg
gcacttcaagtagaggcagagtgtttgaagtatgcatacaaaggaattaaaagtatttgc
gtatatggtggtggggaccgaaaaggacagatagatgtggttaccaaaggtgtggatatt
gttattgctactcctggcagactgcatgatcttcaaatgaacaacttcataaatttgaag
agcataacatacttggttttagatgaggctgacagaatgttggatatgggatttgaacct
cagataatgaagatcctaatagatgtgcggcctgacagacaaactgttatgacaagtgct
acttggcctgatggcgttcgtcgcctagcgaaatcctatttgaaaaatcctatgattgtg
tatgttggcactcttgacttagcagcagtaaatacggtagaacagagagttattgttatc
gctgaagaggaaaagagagctttcatgcaatacttcattgactctatgaagccaaaagat
aaggtcatcatttttgtgggaaaaaaacttacagctgatgacttagcaagcgactttggt
ctccaaggaattccagtacagtcacttcatggtaacagggaacagtgtgatcgagagcaa
gctttagatgacttcaagaaaggcaaagtcagaatactggtagctactgacttagcatcc
cgtggccttgatgtgcatgatattactcatgtttttaactttgactttcctcgcaacatt
gaagagtatgttcatagagtaggtcgtactggaagagcagggcgtactggggaagcagta
acgcttgtcactaagaatgattggagggttgcacctgagctgattgaaattctggaaaga
gcaaaccaagtagttcctaacgagcttattgcaatggcagaaagatacaaacaatttcag
atcagaaaagaaactgaaaaggatatacgaagacctcagagaaagccctcaaaataa
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