Nipponia nippon (crested ibis): 104022152
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Entry
104022152 CDS
T05756
Symbol
TNC
Name
(RefSeq) tenascin
KO
K06252
tenascin
Organism
nni
Nipponia nippon (crested ibis)
Pathway
nni04510
Focal adhesion
nni04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
nni00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
104022152 (TNC)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
104022152 (TNC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
nni00536
]
104022152 (TNC)
Glycosaminoglycan binding proteins [BR:
nni00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
104022152 (TNC)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_TEN
fn3
Fibrinogen_C
EGF_Teneurin
EGF_2
EGF_Tenascin
Ig_DSCAM-DSCAML_C
Fn3_Dep-1_2nd
Pur_ac_phosph_N
EGF
NDNF
Interfer-bind
hEGF
DUF4998
Big_5
EGF_PEAR1L
Motif
Other DBs
NCBI-GeneID:
104022152
NCBI-ProteinID:
XP_009474108
LinkDB
All DBs
Position
Unknown
AA seq
1807 aa
AA seq
DB search
MGLPTQVLACAILALLYQHVNGGLIKRIIRQKRETGLNVTLPEDNQPVIFNHVYNIKLPV
GSLCSVDLDTASGDADLKTEIEPVKNYEEHTVNEENQIVFTHRINIPRRACGCAAAPDIK
DLLSRLEELEGLVSSLREQCASGAGCCPNSQAVEGRLDTTPYCSGHGNYSIEICGCICEP
GWKGPNCSEPDCPHNCFNRGLCVQGKCICNEGFTGEDCSQVTCPSDCNDQGKCVDGVCAC
FEGYTGTDCSEELCSQGCSVHGKCVSGQCVCHEGFTGEDCSEPLCPNNCHNRGRCVDNEC
VCNEGYTGEDCSELICPNDCFDRGRCVNGTCFCEEGFTGEDCGELTCPNNCNGNGRCENG
LCVCYEGFVGDDCSEKRCPKDCHNRGRCVGGRCICQEGYLGEDCGELRCPNDCHNRGLCV
NGQCMCHEGFIGEDCGELRCPSDCNNRGRCVNGKCVCHEGFIGDDCGELRCPNDCNNHGL
CVNGQCMCNEGYTGEDCGELRCPNDCNNRGRCVEGLCECDNGFMGEDCSELSCPNNCHQH
GRCVDGRCVCHEGFMGEDCRERSCPNDCNNVGRCIDGQCVCEDGYMGDDCSDVSPPTELT
VTNITDKTVNLEWKHENLVNEYLITYVPTGSGGLDMQFTVPGNQTAATIHELEPGVEYFI
RVFAILKNKKSIPVSARVATYLPAPEGLKFKSVRETSVQVEWDPLNFSFDGWELVFRNMK
KDDNGDITSSLKRPETSYMQPGLAPGQQYNVSLHIVKNNTRGPGLSRVITTKLDAPSQIE
AKDVTDTTALITWSKPLAEIEGIELTYGPKDIPGDRTAIELSEDENQYSIGNLRPHTEYE
VTLISRRGDMESDPMKEVFVTDLDAPRNLKRVSQTDNSITLEWKNSHANIDNYRIKFAPI
SGGDHAEITVPKGNQATTRATLTGLRPGTEYGIGVTAVKQDRESAPATINAGTDLDNPKD
LEVSEPTETTLSLRWRRPVAKFDRYRLIYISSSGRKNEVEIPVDSTSFILRGLEAGTEYT
ISLVAEKGRHKSKPTTVKGSTEEEPELGKLSVSETGWDGFQLTWTAADGAYENFIIQVQE
SDNPEETRNTTVPGRLRFMNVTGLKANTLYKITLHGVIQGYRTKPLSVETVTGVHPEVGE
LTVSDITPESFNLSWTTANGDFDIFTIEIIDSNRLLEPMEFNISGNSRTAHISGLSPSTD
FIVYLYGISHGFRTQAISAAATTEAEPEVDNLLVSDATPDGFRLSWTADDGVFDSFVLKI
RDTKRKSDPLELIVPGHERTQDITGLKEGTEYEIELYGVSSGRRSQPVNAVATTVVGSPK
GISFSDITENSATVSWTPPRTRVESYRISYVPVTGGTPNVVTVDGSKTRTKLVKLVPGVD
YNVSIISVKGFEESEPISGTLKTALDSPSGLVVVNITESEALATWQPAIAAVDNYVVSYA
SENEPEVTQMVSGNTVECDLKGLQPATEYTLSVHALKDTQRSETLSTQFTTGLDAPRDLS
ATEVQSETAVITWRPPRAPVTGYLLIYESIDGRVKEVILNPETTSYSLTELSPSTQYTVK
LQALNRSLKSKTIQTIFTTTGLLYPYPKDCSQALLNGETTSGLYTIYLNGDKDQPLQVFC
DMGEDGGGWIVFLRRQNGKEDFYKNWKAYVAGFGDPKDEFWIGLENLHKITSQGQYELRV
DLRDKGETAYAVYDKFSVGDSKSRYRLRVDGYSGTAGDSMTYHTGRSFSTFDKDNDSAIT
NCALSYKGAFWYKNCHRVNLMGRYGDNSHSQGVNWFHWKGHEYSIQFAEMKLRPSSFRNL
EGRRKRA
NT seq
5424 nt
NT seq
+upstream
nt +downstream
nt
atgggactccccacccaggttttggcctgtgcaatcttagctttgctgtaccagcatgtc
aatggtggactcatcaaacgaattatccggcagaagcgggagaccgggctaaatgtgacc
ttgccagaggataatcagcctgtgatttttaaccatgtctacaacattaagttgcctgtt
ggctccctttgctctgtggacctggatacagcaagcggtgatgcagacctgaagacagaa
attgagcccgtcaagaattacgaggagcacacggtgaatgaggagaaccagattgtcttc
acacaccgtattaacattccccgccgggcttgtggctgtgcagctgccccagacattaag
gatctgctgagcagactagaggagctggaggggctggtatcctccctacgggagcagtgt
gccagtggggctggatgctgtcctaattcccaggcagtagaaggtcgcctggacacaaca
ccctattgcagtggacatggcaactacagcattgagatctgcggctgcatttgcgagcct
ggctggaaaggccccaactgctctgaaccagactgcccacacaactgcttcaaccggggc
ctctgcgtccagggcaaatgcatctgcaatgaaggcttcactggcgaggactgcagccag
gttacctgcccatctgactgtaatgaccaaggcaagtgcgtggatggggtttgtgcgtgc
tttgaggggtacacaggcacagactgcagcgaagagctctgctcccaggggtgcagtgtg
catgggaagtgcgtgagcgggcagtgtgtgtgccacgagggcttcaccggtgaggactgc
agcgagccgctctgccccaacaactgccacaaccgtgggcgctgtgtggacaatgagtgt
gtctgcaatgagggctacactggtgaggactgcagcgagctcatctgccccaatgactgc
tttgaccgtgggcgctgcgtcaacgggacctgcttctgtgaggagggcttcactggggag
gactgcggggagctgacctgccctaacaactgcaatggcaacgggcgctgtgagaacggg
ctgtgtgtctgctacgagggctttgtgggggatgactgcagtgagaagaggtgcccaaag
gactgtcacaaccgtgggcgctgcgtgggcgggcgctgcatctgccaagaggggtacctg
ggcgaggactgtggggagctgcggtgccccaatgactgtcacaaccgcgggctctgcgtc
aatgggcagtgcatgtgccacgaaggattcattggagaggactgtggggagctgcggtgc
cccagtgactgcaacaaccgtgggcgctgtgtcaacgggaagtgtgtgtgccatgaggga
ttcatcggggacgactgtggtgagctgcggtgccccaacgattgcaacaaccatggactc
tgtgtcaatgggcagtgtatgtgtaacgaggggtacacaggggaggactgtggggagctg
cggtgccccaacgattgcaacaaccgtgggcgctgtgtggaggggctctgtgagtgtgac
aatggcttcatgggggaggactgtagcgagctgtcctgccccaacaactgccaccagcat
gggcgctgcgttgacgggcgctgtgtatgccacgagggcttcatgggggaggactgccgt
gaacggtcctgccccaacgactgcaacaatgtgggacgctgcatcgacggacagtgtgtc
tgtgaggatggttacatgggggatgactgctccgatgtgtctcctccaactgagctgact
gtgacaaacataacagataaaaccgtaaatctggaatggaagcatgagaatctcgtcaat
gagtacctcatcacctatgtccctaccggcagtggtggcttagatatgcagtttaccgtg
ccaggaaaccagacagctgccactatccatgagctggagccgggtgtagaatactttatc
cgtgtctttgcaatccttaaaaacaagaagagtattccagtcagtgccagggtggcaaca
tacctgcctgctccagaaggtctgaaattcaaatctgttagagaaacgtctgtccaggtg
gagtgggatcctctgaacttttcatttgatggctgggagctggtcttccgtaatatgaaa
aaggatgataatggagatataaccagcagcttgaaaaggccagagacatcctatatgcag
ccaggtttggcaccagggcaacagtataatgtatcccttcatatagtgaaaaacaatacc
agaggaccaggactatccagagtgataaccacaaagcttgatgcccctagccagatcgag
gcaaaagatgtcacagacaccacagctcttatcacgtggtccaaacccttggctgaaatt
gaaggcatagagctcacttacggccccaaggatattccaggggacaggacagccattgag
ctctctgaagatgaaaaccaatattctattggaaacctgaggccacacacagagtatgaa
gtgacgcttatctctcgtcgaggggacatggaaagcgaccctatgaaagaagtctttgtc
acagacttggatgctccaagaaacctgaagcgggtgtcacagacagacaatagcattact
ttggagtggaagaacagtcatgcaaatattgataactatcgaattaagtttgctcccatc
tctggtggagaccatgctgagatcacagtgccaaagggcaaccaagcaacaaccagagct
acactcacaggtttgaggcctggaacggaatatggcattggagtgacagcagtgaaacag
gacagggaaagcgctcctgctaccattaatgctggcactgatcttgataaccccaaggac
ttggaagtcagtgaacctactgaaaccaccttatcccttcgctggagaagaccagtggcc
aagtttgatcgttatcgcctcatttatattagctcctctggaaggaagaacgaagtggag
atccctgtggacagcacctcttttatcctgcgagggctggaggcagggacagaatacacc
attagtctggtggcggagaaaggcagacacaaaagcaaacccacgactgtcaagggttcg
actgaggaggaacctgagcttggaaaattatcagtatcagagactggctgggatggtttc
cagctcacctggacagcagccgacggggcctatgagaactttatcattcaggtgcaggag
tctgacaatcccgaagaaacccggaatacgacagtcccaggcagactgcgctttatgaat
gttacaggcctcaaggccaacacactttataagatcacacttcatggtgtgattcaaggc
tacaggaccaaacccctttctgttgaaactgtgacaggagtgcacccagaagttggtgag
ctaaccgtttccgacattactcctgaaagcttcaacctttcttggacaaccgccaatggg
gacttcgacatctttactattgaaattattgattctaacaggttgctggagcccatggag
ttcaacatctcaggcaattcaagaactgctcatatctcagggctttcccccagcactgat
tttattgtctacctctatgggatctctcatggtttccgcacacaggcaataagtgctgca
gctacaacagaagcagaacccgaggtcgacaaccttctggtttcagatgctactccagat
ggcttccgtctgtcctggactgcagatgatggggttttcgacagttttgttctaaaaatc
agggataccaaaaggaaatctgatccactggaactaatagtaccaggccatgaacgcacc
caggatataacagggctgaaagagggtactgaatatgaaattgagctctacggagttagc
agtggacgacgttcccaacccgtaaacgcagtagcaaccacagttgttggatctcccaag
ggaatttctttctccgacatcacagaaaactccgctacagtcagctggacaccccctcgc
acccgcgtggagagctaccggatctcctatgtccctgtcacaggaggtactccaaatgtt
gttacagtcgatggaagcaagacaaggaccaagttggtgaagttagtcccaggtgtagac
tacaatgttagtatcatctctgtgaaaggctttgaagaaagtgaacccatctctggcact
ctgaaaacagctctggacagcccgtcaggcctagtagtggtgaacatcacagagtctgag
gctctggcaacctggcagccagcaattgctgctgtggataattacgttgtctcctatgct
tctgagaatgaaccagaagttactcagatggtatcaggaaacactgtggagtgcgacctg
aagggccttcaacctgcaactgagtatacgctgagtgtccatgcactgaaggacacacag
aggagtgagaccctctccacccagtttactacaggactggatgctccaagagatttaagt
gctactgaggttcagtcagaaacagctgtaataacttggaggcctccacgtgctcctgtc
actggttatctcctgatctacgagtccattgatggcagagtcaaggaagtcatcctaaac
cccgagacaacgtcctacagcctgacagagctgagcccatctacccagtacacggtgaaa
ctccaggcactgaacagatccctgaaaagcaaaacaatccagactattttcaccacaact
ggtcttctctatccttaccctaaagactgctcccaggctctcctgaacggagaaaccacc
tctgggctctacacaatttacctgaatggggacaaggatcagcctctgcaagtcttctgc
gacatgggcgaggatgggggcggatggattgtgttcctgaggcgtcaaaatggaaaagaa
gatttctacaagaactggaaggcttatgtggctggctttggagatcctaaggatgaattc
tggataggtctggagaatctccacaaaatcacttctcaggggcagtatgagctgcgtgta
gatctgcgggacaagggtgagacagcttatgctgtctacgacaagttcagcgttggagac
tcaaagagcagataccggctaagggtggatggatacagtggcacagcaggtgactccatg
acgtaccataccggaaggtccttctccacctttgacaaggacaatgattctgccattacc
aactgtgctttgtcatacaaaggtgcattctggtacaagaattgtcaccgagtcaatctg
atgggcagatacggtgacaacagccacagtcagggtgttaactggttccactggaagggc
catgaatattctatccagtttgcagagatgaagctgagaccctccagcttccgaaatctg
gaaggaagacgaaagcgagcataa
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