Nipponia nippon (crested ibis): 104022308
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Entry
104022308 CDS
T05756
Symbol
LRSAM1
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase LRSAM1
KO
K10641
E3 ubiquitin-protein ligase LRSAM1 [EC:
2.3.2.27
]
Organism
nni
Nipponia nippon (crested ibis)
Brite
KEGG Orthology (KO) [BR:
nni00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nni04131
]
104022308 (LRSAM1)
04121 Ubiquitin system [BR:
nni04121
]
104022308 (LRSAM1)
Enzymes [BR:
nni01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104022308 (LRSAM1)
Membrane trafficking [BR:
nni04131
]
Autophagy
Xenophagy
Other xenophagy associated proteins
104022308 (LRSAM1)
Ubiquitin system [BR:
nni04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
104022308 (LRSAM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
zf-C3HC4_3
LRR_14
SAM_1
SAM_2
Prok-RING_4
LRR_4
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
104022308
NCBI-ProteinID:
XP_009474295
LinkDB
All DBs
Position
Unknown
AA seq
728 aa
AA seq
DB search
MPLFFRKKKPSDDARKRLEYQMCLAKEAGADDILDISKCELSEVPYGAFATCKVLQKKVL
IIHTNNLTSLVPKSCSLLSLITVKVLDLHNNQLVXRISXISFLLIPXVLNLEKNLLKCLP
QSIGDLAQLQMLNVKGNKLKELPATVSGLRSLRTLDISENVLQELPRVLAHLRTLETLTL
DASSMTYPSPDICSAGTESIQQFLCKECGIAYYPPSQYLLPTLESDGGGTSVDGVDRAVH
KYLEEESEWQNKFLDYEKRKEQKMQEKLEFERRLNMGQREHALLVQQISSQKDEILQTVR
EDQMRLEEGLTKHQRYLEEERLKLLQQLKQAEQGIASRIQKLLEDNQRQNQSSDILKSLE
NERIRMEQLMAITQEETEHLRRREVASAMQQMLAESYKNKLIQMTYESRRQDLVNQACSS
LAETDQKFQQILAWQQLDQNKAVGQILQQIEMQKAAFEALQVKKDLMHRQIRNQIKLIET
ELLQLTQLELKRQELDTETLQGVITEQRQALGYLLQQLLKEKKQREEELRQILLEMEAKS
ETKQENYWLIQYQRRRNQKPLSLKLQEEGLEWQLVNLLTELSAGQYVPVFAHHRISLQML
STMTASDLEKIGVTEAGLQRAILKRAQEILAVAKTIPELLRTVDAEVPAAPEPSAPFEEL
PSPVVPMAPPLQWDEKKSECVVCMEKETQMVFLPCGHVCCCQTCCEQLHACPLCRKDITQ
RIRIFHSG
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atgccactcttcttccgtaagaagaaacccagcgatgatgctcggaagcgccttgaatac
caaatgtgcctggcaaaagaagctggtgctgatgacattcttgacatatccaaatgtgaa
ctctcggaggttccttatggggcctttgcaacttgtaaagtcttgcaaaaaaaggtgctg
attattcatacgaataatctgacatctttagttccaaagtcctgcagcctcctgagtctc
ataactgtgaaggttctagacctgcacaacaaccaacttgtataaagaatatcttgaata
tcttttctgttaataccttaggttctaaaccttgaaaagaatcttttaaaatgtcttcca
caatctataggagaccttgcccagctccagatgctcaatgtgaaaggtaacaagctgaag
gagctgcctgctaccgtgagcggcttgcggagtttgcgcactctggatatcagcgagaac
gtgctgcaagagctgccacgggtgctggctcacctccgcacgctggagacgctgaccttg
gatgcttcttccatgacctacccatcacctgatatttgcagtgcaggcacagagtccatt
cagcagttcctctgcaaagagtgtggaattgcgtactaccctccctcgcagtatctgctc
cccacgctggagagtgatggaggaggaacttcggtggatggggtggacagggcagtgcat
aagtacttggaggaggagagcgagtggcagaacaaattcttggattatgagaagaggaag
gaacaaaaaatgcaggagaagctagaatttgagcggcgcctgaacatggggcaaagagaa
catgctctgcttgttcagcagatcagcagtcagaaggatgagatactgcagacagtgaga
gaggaccagatgaggctggaggagggtctcacaaagcaccagcgctatttggaggaggag
cgcctgaagctgctgcagcagttgaagcaagcggagcaaggcattgccagccgtatccag
aagctgctagaggacaaccagaggcaaaaccaaagttcagacattctgaaatccttggag
aatgagagaataaggatggagcagctgatggcaataacacaggaggagacggagcatcta
cgcagaagggaagtggcctctgccatgcaacagatgctggccgagagctacaagaacaag
ctcatccaaatgacctacgagtctcgtcggcaagaccttgtcaaccaggcctgctccagc
ctagctgagacggatcagaagttccagcaaatcctggcttggcaacagctggatcagaac
aaagctgtcggtcagatcttgcagcagattgagatgcagaaagctgcctttgaagctctc
caggtgaagaaggatcttatgcacaggcagatcaggaaccagattaaattaatagaaaca
gagttattgcagttgacacagctggagttaaagaggcaagaactggacacagagacgctg
cagggggtgatcacagagcaacgccaagcactcggctacctgctgcagcagcttctcaaa
gaaaagaagcaaagggaagaagaactgcgacaaatactgctggaaatggaggcaaagagt
gaaaccaaacaggagaactactggctgatccagtaccagcgccggcgcaaccagaagccc
ctctccctgaaactccaggaggagggcttggagtggcagctggtgaaccttttaaccgag
ctgtctgcaggacagtacgtgccagtctttgcacaccatcgaatatccttgcaaatgctc
agcaccatgactgccagtgacctggaaaagatcggcgtgacggaggctggtctgcagcgt
gccatcctcaagcgagctcaggagatcctggctgtggccaagacaatcccagagctgctg
aggacggtggacgctgaggtccctgcagccccagaacccagcgctcccttcgaggagctt
ccgagccccgtggtcccgatggctccaccactgcagtgggacgagaagaagtcggagtgc
gttgtctgcatggagaaggagacccagatggttttcctgccctgcggccatgtctgctgc
tgccagacctgctgcgagcagctgcacgcttgccccctgtgccgcaaggatatcacacag
cgcatccgcatcttccacagcggctag
DBGET
integrated database retrieval system
