Nipponia nippon (crested ibis): 104022325
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Entry
104022325 CDS
T05756
Symbol
SMC3
Name
(RefSeq) structural maintenance of chromosomes protein 3
KO
K06669
structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
Organism
nni
Nipponia nippon (crested ibis)
Pathway
nni04110
Cell cycle
nni04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
nni00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
104022325 (SMC3)
04114 Oocyte meiosis
104022325 (SMC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nni03036
]
104022325 (SMC3)
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
nni00535
]
104022325 (SMC3)
Chromosome and associated proteins [BR:
nni03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
104022325 (SMC3)
Meiosis-specific proteins
Cohesin complex and associated proteins
104022325 (SMC3)
Proteoglycans [BR:
nni00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
104022325 (SMC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_15
AAA_21
AAA_23
AAA_29
FtsK_SpoIIIE
Motif
Other DBs
NCBI-GeneID:
104022325
NCBI-ProteinID:
XP_009474311
LinkDB
All DBs
Position
Unknown
AA seq
1217 aa
AA seq
DB search
MYIKQVIIQGFRSYRDQTIVDPFSSKHNVIVGRNGSGKSNFFYAIQFVLSDEFSHLRPEQ
RLALLHEGTGPRVISAFVEIIFDNSDNRLPIDKEEVSLRRVIGAKKDQYFLDKKMVTKND
VMNLLESAGFSRSNPYYIVKQGKINQMATAPDSQRLKLLREVAGTRVYDERKEESISLMK
ETEGKREKINELLKYIEERLHTLEEEKEELAQYQKWDKMRRALEYTIYNQELNETRAKLD
ELSAKRETSGEKSRQLRDAQQDARDKMEEIERQVRELKTKISAMKEEKEQLSAERQEQIK
QRTKLELKAKDLQDELAGNSEQRKRLLKERQKLLEKIEEKQKELAETEPKFNSVKEKEER
GIARLAQATQERTDLYAKQGRGSQFTSKEERDKWIKKELKSLDQAINDKKRQIAAIHKDL
EDTEANKEKNLEQYSKLDQDLNEVKARVEELDRKYYEVKNKKDELQSERNYLWREENAEQ
QALAAKREDLEKKQQLLRAATGKAILNGIDSINKVLEHFRRKGINQHVLNGYHGIVMNNF
ECEPAFYTCVEVTAGNRLFYHIVDSDEVSTKILMEFNKMNLPGEVTFLPLNKLDVRDTAY
PETNDAIPMISKLRYNPRFDKAFKHVFGKTLICRSMEVSTQLARAFTMDCITLEGDQVSH
RGALTGGYYDTRKSRLELQKDVRKAEEELGELEAKLNENLRRNIERINNEIDQLMNQMQQ
IETQQRKFKASRDSILSEMKMLKEKRQQSEKTFMPKQRSLQSLEASLHAMESTRESLKAE
LGTDLLSQLSLEDQKRVDALNDEIRQLQQENRQLLNERIKLEGIITRVETYLNENLRKRL
DQVEQELNELRETEGGTVLTATTSELEAINKRVKDTLARSDDLDNSIDKTEAGIKELQKS
MERWKNMEKEHMDAINHDTKELEKMTNRQGMLLKKKEECMKKIRELGSLPQEAFEKYQTL
SLKQLFRKLEQCNTELKKYSHVNKKALDQFVNFSEQKEKLIKRQEELDRGYKSIMELMNV
LELRKYEAIQLTFKQVSKNFSEVFQKLVPGGKATLVMKKGDVEGSQSQDEGEGSTESERG
SGSQSSVPSVDQFTGVGIRVSFTGKQGEMREMQQLSGGQKSLVALALIFAIQKCDPAPFY
LFDEIDQALDAQHRKAVSDMIMELAEHAQFITTTFRPELLESADKFYGVKFRNKVSHIDV
ITAEMAKDFVEDDTTHG
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgtacatcaagcaggtaatcattcagggctttcgaagctacagggaccaaaccattgtg
gacccattcagctcaaaacacaatgtcattgtgggaagaaatggatctggaaaaagcaac
tttttttatgcaattcagtttgtcctcagtgatgagtttagtcatcttcgcccagagcag
agactggctttgttgcatgaaggtacaggtcctcgtgttatttcagcatttgtggaaatt
attttcgacaattcggacaacaggttaccgattgataaagaggaagtctcacttcgcaga
gtcattggagccaagaaggaccaatatttcttagacaagaaaatggtgacgaaaaatgat
gtaatgaatcttcttgaaagcgctggattttctcgcagtaatccctactatattgtcaaa
caaggaaagatcaaccagatggccacagctcctgactctcaaagactgaagttactaaga
gaagtagctggtaccagagtgtacgatgaacgtaaagaagagagtatttcactaatgaaa
gaaacagagggcaagcgagagaagatcaatgagttgttgaaatacattgaagagcgactg
cataccctagaagaggagaaggaagagctggctcagtaccagaaatgggataaaatgagg
agagcgttagaatacaccatttataatcaggagcttaatgaaacccgagctaagcttgat
gagctttctgccaaacgagagacaagtggagagaaatccaggcagctgagagatgcacag
caagatgctagagataaaatggaggaaatagaacggcaagttcgggaactgaagacaaag
atttcagcaatgaaagaagagaaagaacaacttagtgctgaaagacaggagcagattaaa
cagaggactaaattagagctgaaggctaaagacctgcaggatgaattagctggcaacagt
gaacaaaggaaaagattgttaaaagagaggcaaaagcttcttgagaaaattgaagaaaag
cagaaagaattagcagaaacggagccaaaattcaacagtgtaaaagaaaaagaagagagg
ggaattgctagacttgcacaggctacgcaggaaagaacagatctctatgcaaaacaaggt
cgaggaagccagtttacttccaaagaagaaagggataagtggataaagaaagaactgaag
tctttagatcaagccatcaatgacaagaagcggcagattgcagctatacacaaggattta
gaggatacagaggcaaacaaggagaaaaatttggaacagtacagtaaactggaccaggat
cttaatgaagtgaaggctcgtgttgaagaactggacagaaaatactatgaagtgaaaaat
aaaaaggatgaactacagagcgaaagaaattatctatggagagaagagaatgcagaacaa
caagctcttgctgcaaagcgggaggatttagaaaagaaacagcagcttctcagagcagca
acaggaaaggccattttgaatggtatagacagcataaacaaagttttggagcacttccgg
cgaaaaggcataaaccagcatgttctaaatggttatcatggcattgtgatgaataacttt
gaatgcgaaccagctttctacacctgtgttgaagttactgcagggaacaggttgttttat
cacattgtggattctgatgaagtcagtacaaagatactaatggaatttaacaaaatgaac
cttcctggagaagttactttcctccctctgaacaagctggatgttagagatactgcttat
cctgagactaatgatgctattcctatgatcagtaagctgaggtacaatccaagatttgac
aaagctttcaaacacgtttttggaaagactctaatttgtcgtagcatggaagtgtctacc
cagctggccagagctttcactatggattgtattactctggaaggtgatcaagtcagccat
cgtggtgctttgactggaggttattacgacacaaggaaatctcggcttgaattgcaaaaa
gatgttagaaaggcagaagaagaacttggtgaactcgaagcaaaactcaatgaaaactta
cgcagaaacattgaaaggattaataatgagattgaccagctaatgaaccaaatgcagcaa
attgagacacagcagagaaagttcaaagcctctcgagacagtattttgtcagagatgaaa
atgctgaaggagaagaggcagcagtctgaaaagacatttatgcctaagcaacgcagtttg
cagagcttggaggcaagtttacatgctatggagtcaactagagaatcattaaaagcagaa
ctggggactgatttgttgtctcagctcagtcttgaagatcagaaacgtgtggatgctctt
aatgatgaaattcgacaactacagcaagaaaacagacagcttttgaatgagaggattaaa
ctagaaggcattatcacaagagttgaaacatatctcaatgagaatctgagaaaacgctta
gaccaagtggaacaagaactgaatgagctacgagaaacagaaggtggcacagttcttacc
gccacaacatcggaacttgaggctatcaacaaacgagtgaaagatacactggcacggtca
gatgatctggataattctattgacaaaacagaagcaggaattaaagagcttcaaaagagc
atggaacgctggaagaacatggaaaaggagcatatggatgccattaaccatgatacaaaa
gaacttgaaaaaatgactaacaggcaaggcatgctcctcaagaagaaagaggaatgcatg
aagaaaatcagagagttgggttcacttccacaggaggcttttgaaaagtatcagacttta
agtttaaagcagttattccgcaaactggagcagtgcaatacagaactgaagaaatacagc
catgttaataaaaaagctttagatcagtttgtgaatttctcagagcagaaggaaaaattg
ataaaaagacaagaggaactggacaggggctacaaatccatcatggagctgatgaatgtc
cttgagctcaggaagtacgaggctattcagctgactttcaaacaggtgtcaaaaaatttc
agtgaagtattccagaagttagtccctggtggcaaggccacgttagtgatgaagaaagga
gatgtggagggcagtcagtcccaggatgaaggtgaaggcagcactgagagtgaaagggga
tctggatctcagagcagtgttccatctgtagaccagttcactggagttggcataagggta
tcgttcacagggaagcagggtgaaatgagagaaatgcagcaactttcaggtggacagaaa
tccttagtggccctagccctgatatttgctatccagaagtgtgatccagctccattttac
ttgtttgatgaaattgaccaagccttggatgctcagcacaggaaagctgtttcagatatg
attatggaactagctgaacatgctcagtttattacaacaacttttaggcccgaactgctt
gagtcggctgacaagttctatggtgtaaaattcagaaacaaggttagtcatattgatgtg
atcacagcagaaatggccaaagacttcgtagaagatgacaccacgcatggttaa
DBGET
integrated database retrieval system
