Nipponia nippon (crested ibis): 104022329
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Entry
104022329 CDS
T05756
Symbol
SHOC2
Name
(RefSeq) leucine-rich repeat protein SHOC-2 isoform X1
KO
K19613
leucine-rich repeat protein SHOC2
Organism
nni
Nipponia nippon (crested ibis)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_14
LRR_4
LRR_LRWD1
LRR_9
LRR_13
LRR_5
LRR_EndoS
Motif
Other DBs
NCBI-GeneID:
104022329
NCBI-ProteinID:
XP_009474316
UniProt:
A0A091UPD8
LinkDB
All DBs
Position
Unknown
AA seq
582 aa
AA seq
DB search
MSSNLGKEKDCKEKDPKVPSSKEREKEAKASGGFGKESKEKEPKTKGKDAKDGKKDSSST
QPGVAFSVDNTIKRPNPATGTRKKSSNAEVIKELNKCREENSMRLDLSKRSIHMLPSAIK
ELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHNK
LREIPSVVYKLSSLATLYLRFNRITTVEKDIKNLSKLTMLSIRENKIKQLPAEIGELCNL
ITLDVAHNQLEHLPEEIGSCTQITNLDLQHNELLDLPETIGNLSSLSRLGLRYNRLSAIP
KSLAKCSELDELNLENNNISTLPEGLLSSLVKLTSLTLARNCFQSYPVGGPSQFSTIYSL
NMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPED
VSGLVSLEVLILSNNLLKKLPHGIGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTN
NQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELALC
SKLSIMSIENCPLSHLPPQIVAGGPSFIIQFLKMQGPYRAMV
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgagtagtaatctaggaaaagaaaaggactgtaaagagaaggatccaaaagtcccatcg
tcaaaagaaagggagaaggaggccaaagcctctggaggatttgggaaagagagcaaagaa
aaggagcctaagaccaaagggaaagatgccaaagatggaaagaaggactccagtagcacg
cagcctggggtagctttttcagtggacaatacgataaaaagacctaatccagccacaggt
acccgcaaaaaatccagcaatgctgaagtgatcaaagagctaaataaatgccgggaagag
aattcaatgcgcttggacttgtccaagaggtctatacacatgcttccatcagctatcaaa
gagctaacgcagttaacagaactttatttatacagtaacaaactgcagtccctaccggca
gaggtgggttgtcttgtgaacctgatgacactggccctgagtgaaaactcacttaccagt
ttgcctgactctcttgataacttgaagaaactgcgcatgcttgacctgcggcataacaaa
cttagagaaatcccttcagtggtgtataagctaagctctctcgccactctttacctacgc
tttaatcgtataactactgtggaaaaggatatcaaaaacttgtcaaaactcaccatgctt
agcatacgagagaacaaaatcaagcaactacctgctgaaattggtgagttgtgtaacctc
ataacgctggatgtagcgcacaatcagcttgaacaccttcctgaagagattggaagctgc
acgcagatcaccaaccttgacttgcagcacaatgagctcttggacctaccagaaaccata
ggaaatctgtccagtctaagtcgtcttggcctgaggtacaataggctgtcagcaattccg
aagtctttagcaaagtgcagtgaacttgatgaactgaacctggagaacaacaacatctct
actttaccagagggtcttttatccagccttgtcaaactgactagtttaacactggccagg
aactgcttccagtcctatcctgtgggtggcccgtcccagttctccacaatctactctctc
aatatggagcacaaccgcatcaataaaatcccctttggaattttctctagagctaaagta
ttaagtaagctgaacatgaaggacaatcagctgacgtctctccccttggacttcgggact
tggactagtatggtagaactgaatttagcgactaatcagctcacaaaaatccctgaggat
gtatctgggcttgtttcccttgaggttcttatcttgtcaaacaatctactaaagaaactt
ccccatggaattggaaatctacggaaactccgagagctagatctagaggaaaacaaactg
gaatccttgccaaatgaaatagcttacctcaaggatctgcagaaattggttctgactaat
aatcagttgaccacccttcccagaggtatcggtcaccttaccaatctgacgcaccttggg
cttggagagaatcttctcacacaccttcctgaggaaattggtacactggagaatctggaa
gaactgtatttgaatgacaaccccaatctgcacagccttccctttgagctggctctttgc
agcaaactgtcaataatgagtatcgagaactgcccgctcagccaccttccacctcagatt
gttgcaggaggaccctccttcatcattcagttcctaaaaatgcagggaccatatcgtgcc
atggtctga
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