Nipponia nippon (crested ibis): 104022344
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Entry
104022344 CDS
T05756
Symbol
TRUB1
Name
(RefSeq) probable tRNA pseudouridine synthase 1
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
nni
Nipponia nippon (crested ibis)
Brite
KEGG Orthology (KO) [BR:
nni00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nni03016
]
104022344 (TRUB1)
Enzymes [BR:
nni01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
104022344 (TRUB1)
Transfer RNA biogenesis [BR:
nni03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
104022344 (TRUB1)
Prokaryotic type
104022344 (TRUB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Pus10_C
DMA
Motif
Other DBs
NCBI-GeneID:
104022344
NCBI-ProteinID:
XP_009474335
LinkDB
All DBs
Position
Unknown
AA seq
222 aa
AA seq
DB search
MGHGGTLDSAAAGVLVVGIGKGTKMLRTMLAGSKKYTAIGLLGKATDTLDATGKVTEEKP
YDQITKGDLENVLQKFTGDIMQVPPLYSALKKDGERLSTLMKRGEAVEAKPARPVRVYSL
SLQQFQPPLFTLDVECGGGFYVRSLVSDIGKELSTCATMQELTRTKHGPFTLEEHVLYED
KWTIDEIARSLEHCTSLLPGEPSHKKLKTEHPGETAVSCEDK
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
atgggacatggtggaactttggacagtgcagcggcaggagttctggtggttggtattgga
aaaggaacaaaaatgctgagaactatgttggcaggttccaagaagtacactgccattgga
ctactgggcaaagctactgatacgttggatgccacaggaaaagtaactgaagaaaaacct
tacgaccagataacaaaaggagatcttgaaaacgtgctgcaaaagttcacaggggacata
atgcaggttcctccactgtattctgccttgaagaaggatggagaaaggctatcaactctg
atgaagagaggagaagcagtggaagcaaagcctgctcggccagtgagagtgtacagcctc
tctctccaacagttccagccaccactcttcacactggatgttgaatgtggtggtggcttt
tatgtcaggagcctggtcagtgacattggcaaagaactctctacctgtgccactatgcaa
gagctgacccgaaccaaacatgggccatttacgctagaggagcatgtcctttatgaagac
aaatggacaattgatgaaattgcacgatccttagagcattgcacgtctcttctcccagga
gagccatctcataaaaaattgaagacagagcatcctggtgaaactgctgtgagctgtgaa
gataagtga
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