Nipponia nippon (crested ibis): 104022364
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Entry
104022364 CDS
T05756
Symbol
TAF5
Name
(RefSeq) transcription initiation factor TFIID subunit 5
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
nni
Nipponia nippon (crested ibis)
Pathway
nni03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
nni00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
104022364 (TAF5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nni03021
]
104022364 (TAF5)
03036 Chromosome and associated proteins [BR:
nni03036
]
104022364 (TAF5)
Transcription machinery [BR:
nni03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
104022364 (TAF5)
Coactivators
SAGA/TFTC/STAGA complex
104022364 (TAF5)
Chromosome and associated proteins [BR:
nni03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
104022364 (TAF5)
STAGA complex
104022364 (TAF5)
TFTC complex
104022364 (TAF5)
SAGA complex
104022364 (TAF5)
SLIK complex
104022364 (TAF5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40_Prp19
WD40_CDC20-Fz
TFIID_NTD2
Beta-prop_WDR3_2nd
WD40_WDHD1_1st
WD40_Gbeta
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
WDR55
Beta-prop_WDR36-Utp21_1st
NBCH_WD40
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
ANAPC4_WD40
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_TEP1_C
Beta-prop_Aladin
Beta-prop_SCAP
Beta-prop_VPS8
Beta-prop_RIG_2nd
Beta-prop_WDR41
Beta-prop_IFT140_1st
Beta-prop_Vps41
Beta-prop_EIPR1
WD40_RFWD3
Beta-prop_DCAF4
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_DCAF12
Beta-prop_SPT8
WD_LRWD1
Beta-prop_Nup120_160
Tricorn_2nd
PEP5_VPS11_N
CDK5RAP3
Beta-prop_ACSF4
Cytochrom_D1
RAB3GAP2_N
eIF2A
VPS8_N
VID27
Beta-prop_WDR11_2nd
Motif
Other DBs
NCBI-GeneID:
104022364
NCBI-ProteinID:
XP_009474358
LinkDB
All DBs
Position
Unknown
AA seq
665 aa
AA seq
DB search
MAALPEEPAEVAAVKPDPEVGTPPQPPAAPPASAAAPPQPRGLSLMLGHKVGGGVVVEDQ
PDVSAVLSAYNQQGDPTLYEEYYSGLKHFIECSLDCHRAELSQLFYPLFVHMYLELVYNQ
HESEAKSFFERFHGDQECYYQDDLRVLSSLTKKEHMKGNETMLDFRTSKFVLRISRDSYQ
LLKRHLQEKQNNQIWNIVQEHLYIDIFDGMPRSKQQIDAMVGSLAGEAKREANKAKVFFG
LLKEPEFDVPLDDEDEEGENEEGKPKKKKPKKDSVGSKSKKQDPNAPPQNRIPLPELKDS
DKLDKVMNMKEAARRVRLGPECLPSICFYTFLNAYQGLTAVDITDDSSMIVGGFADSTVR
VWSVTPKKLRSVKTAADLSLIDKESDDVLERIMDEKTASELKILYGHSGPVYGTSFSPDR
NYLLSCSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATD
HYQPLRIFAGHLADVTCTRFHPNSNYVATGSADRTIRLWDVLNGNCVRIFTGHKGPIHSL
AFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTIYALRFSRDGEILASGSMDNTV
RLWDAVKAFEDLETDDFTTATGHINLPENSQDLLLGTYMTKSTPVVHLHFTRRNLLLAAG
AYSSQ
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atggcggcactacctgaggagccggcggaggtggcggcggtaaagccggaccctgaggtg
gggacgccgccgcagccccctgctgctcctccggcctccgccgccgctcccccccagcct
cgggggctctccctgatgctggggcacaaggttggaggaggtgttgttgtggaagatcag
ccagatgtgagtgcggtattgtctgcctacaatcaacagggggaccccacgctgtacgag
gaatactacagtggattaaaacacttcattgagtgttccttggactgtcatcgagcggaa
ttgtctcagctgttttatcctctctttgtgcacatgtacttggaattggtctacaatcaa
catgagagtgaagcaaagtctttttttgaaagatttcatggggatcaggagtgttattac
caggatgacctgcgtgtattatctagcttaaccaaaaaagaacatatgaaaggtaacgag
accatgctggatttccgaacaagcaagtttgtgctgcgtatttcccgtgactcttaccaa
ctcttgaagaggcatcttcaggaaaagcagaacaatcagatctggaatattgttcaggaa
catctttacattgatatctttgatggaatgcctcgcagtaaacaacagatagatgctatg
gtgggaagcttggctggggaggcaaaacgagaggctaataaagcaaaggttttctttggc
ttattgaaagaaccagagtttgatgtgcctttggatgatgaagatgaagaaggagaaaat
gaggaaggaaagccaaagaagaaaaaacctaaaaaagatagtgtagggtcaaaaagtaaa
aaacaagaccctaatgctcctccccaaaacagaattcctctgcctgaactgaaagactct
gacaagctggataaagtaatgaatatgaaggaagctgcgaggcgtgtgcgtcttggccca
gagtgcctgccctccatctgtttctacacattccttaatgcttaccagggtctgactgca
gtggatattacagatgactctagcatgattgtaggaggctttgccgactctactgtcaga
gtgtggtccgtgactcctaaaaagctacgtagtgtgaaaacagcagcagacctcagtctc
atcgacaaagaatcagatgatgtcttggagaggatcatggatgagaaaacagcaagtgag
ttgaagattttatatggtcacagtggacctgtctatggcaccagcttcagtcccgatagg
aactatctgttgtcctgttctgaggatggcactgtcagattgtggagtctccaaacattc
acgtgtttggtgggatataaaggacacaactatccagtatgggatacacaattctctcct
tatggttattactttgtgtcagggggacacgacagagtggctcgtctgtgggcaacggat
cactaccagcctttgcggatatttgctggccatcttgctgatgtgacgtgtacccgattt
catccaaactccaactatgttgccacgggctcggcagacagaactatacggctctgggat
gttttgaacgggaattgtgtaagaatattcactggacataagggaccaattcattcattg
gcattttctcctaatggacgattcctggctactggagcaacagatggaagagttctgctg
tgggatattggacatggcttgatggttggagaactgaaagggcacactgacactatctac
gcgctcagattcagtagagatggggagattttagcatcaggttcaatggataacacagtt
cgtctgtgggatgctgtgaaggcatttgaagatttagaaaccgatgactttactacagcc
accggacatataaacttgcctgaaaactcacaggacttgttactaggtacatacatgacc
aaatcgaccccggttgtacacctccattttacacgcagaaacctgctgctggctgcggga
gcctacagttcacagtaa
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