Nipponia nippon (crested ibis): 104022409
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Entry
104022409 CDS
T05756
Symbol
SPTBN1
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1 isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
nni
Nipponia nippon (crested ibis)
Pathway
nni04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
nni00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
104022409 (SPTBN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
nni04812
]
104022409 (SPTBN1)
Cytoskeleton proteins [BR:
nni04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
104022409 (SPTBN1)
Intermediate filaments
Intermediate filament-binding proteins
104022409 (SPTBN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
SOS1_NGEF_PH
SLATT_6
PH_11
Motif
Other DBs
NCBI-GeneID:
104022409
NCBI-ProteinID:
XP_009474404
LinkDB
All DBs
Position
Unknown
AA seq
2362 aa
AA seq
DB search
MTTTVATDYDNIEIQQQYSDVNNRWDVDDWDNENSSARLFERSRIKALADEREAVQKKTF
TKWVNSHLARVSCRITDLYTDLRDGRMLIKLLEVLSGERLPKPTKGRMRIHCLENVDKAL
QFLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQDISVETEDNKEKKSAKDALL
LWCQMKTAGYPNVNIHNFTTSWRDGMAFNALIHKHRPDLIDFDKLKKSNAHYNLQNAFNL
AEQHLGLTKLLDPEDISVDHPDEKSIITYVVTYYHYFSKMKALAVEGKRIGKVLDNAIET
EKMIEKYESLASDLLEWIEQTIIILNNRKFANSLVGVQQQLQAFNTYRTVEKPPKFTEKG
NLEVLLFTIQSKMRANNQKVYMPREGKLISDINKAWERLEKAEHERELALRNELIRQEKL
EQLARRFDRKAAMRETWLSENQRLVSQDNFGFDLPAVEAATKKHEAIETDIAAYEERVQA
VVAVAKELETENYHDIKRITARKDNVIRLWEYLLELLRARRQRLEMNLGLQKIFQEMLYI
MDWMDEMKVLLLSQDYGKHLLGVEDLLQKHALVEADIAIQAERVRGVNASAQKFATDGEG
YKPCDPQVIRDRVAHMEFCYQELCQLAAERRARLEESRRLWKFFWEMAEEEGWIREKEQI
LSSDDYGKDLTSVVRLLSKHKAFEDEMSGRSGHFQQAIKEGEDMIAEEHFGSEKIRERIK
DIREQWANLEQLSAIRKKRLEEASLLHQFQADADDIDAWMLDILKIVSSNDVGHDEYSTQ
SLVKKHKDVAEEIASYRPTIDSLHEQAKALPQEHAGSPDVQGRLSGIEERYKEVAELTRL
RKQALQDTLALYKMFSEADACELWIDEKEKWLNNMQIPEKLEDLEVIQHRFESLEPEMNN
QASRVAVVNQIARQLMHSGHPSEKEIKAQQDKLNTRWSQFRELVDRKKDALLSALSIQNY
HLECNETKSWIREKTKVIESTQDLGNDLAGVMALQRKLTGMERDLVAIEAKLSDLQKEAE
KLESEHPDQAQAILSRLAEINDVWEEMKTTLKNREESLGEASKLQQFLRDLDDFQSWLSR
TQTAIASEDMPNTLTEAEKLLTQHENIKNEINNYEEDYQKMRDMGEMVTQGQTDAQYMFL
RQRLQALDTGWNELHKMWENRQNLLSQSHAYQLFLRDTKQAEAFLNNQEYVLAHTEMPTT
LEGAEAAIKKQEDFMTTMDANEEKINAVVETGRRLVSDGNINSDKIQEKVDSIDDRHRKN
REAASELLMRLKDNRDLQKFLQDCQELSLWINEKMLTAQDMSYDEARNLHSKWLKHQAFM
AELASNKEWLEKIEKEGMQLIAEKPETEAVVKEKLTGLHQMWEELESTTQTKAQRLFDAN
KAELFTQSCADLDKWLNGLESQIQSDDYGKDLTSVNILLKKQQMLENQMDVRKKEIEELQ
SQARALSQEGKSTDEVDGKRLTVEKKFLELLEPLNERKANLLASKEIHQFNRDVEDEILW
VGERMPIATSTDHGHNLQTVQLLIKKNQTLQKEIQGHQPRIDDIFERSQNIITESSPNAE
AIQQRLADLQQLWNLLIEETEKRHKRLEESHRAQQYYFDAAEAEAWMSEQELYMMSEEKA
KDEQSAVSMLKKHQILEQAVEDYAETVHQLSKTSRTLVADNHPESERISMRQSKVDKLYA
GLKDLAEERRGKLDERHRLFQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQERFR
EFARDTGNIGQERVDTVNHMADELINSGHSDAATIAEWKDGLNEAWADLLELIDTRTQIL
AASYELHKFYHDAKEILGRIQDKHKKLPEELGRDQNTVETLQRMHTTFEHDIQALGTQVR
QLQEDAARLQAAYAGDKADDIQKRENEVLEAWKALLDACEGRRVRLVDTGDKFRFFSMVR
DLMLWMEDVIRQIEAQEKPRDVSSVELLMNNHQGIKAEIDARNDSFTTCIELGKSLLARK
HYASEEIKEKLLQLTEKRKEMIDKWEDRWEWLRLILEVHQFSRDASVAEAWLLGQEPYLS
SREIGQSVDEVEKLIKRHEAFEKSAATWDERFAALERLTTLELLEVRRQQEEEERKRQPP
TPEPSPKVAEDADSQQQWDGTKGEQVSQNGLPSDQESPRVAETAETNEMVNGAAEQRTSS
KESSPVPSPTADRKAKTAIQAQTAATLPAKTQEIPSAQMEGFLHRKHEWETHSKKASSRS
WHNVYCVINNQEMGFYKDSKAAASGIPYHNEIPVSLKEAVCEIAVDYKKKKHVFKLRLTD
GNEYLFQAKDDEEMNTWIQAITSAISSDKIEVSPTTQSTPASSRAQTLPASVTITSESSP
GKREKDKEKDKEKRFSLFGKKK
NT seq
7089 nt
NT seq
+upstream
nt +downstream
nt
atgacgacaacagtagcgacagattatgacaatattgaaatccaacagcagtacagcgat
gtcaacaaccgctgggatgtcgatgactgggacaatgaaaatagttctgctcgactgttt
gaacgatcccgcatcaaggccctagctgatgaacgtgaggcagttcagaagaagactttc
acaaagtgggttaattcccacttggcacgcgtatcatgcagaattacggatttgtacact
gaccttcgcgatggaaggatgctcatcaaacttctggaagttctttcaggagagagactt
cctaaaccaactaagggaaggatgcgcatccattgcctggagaatgttgataaagccctc
cagttcctgaaagagcagagagtgcacctagaaaacatgggatctcacgatattgtggat
gggaatcacaggctgacacttggccttatttggactattatcctgagattccagatccaa
gatatcagtgttgaaactgaggacaacaaggagaagaaatctgctaaagatgctttgctt
ttgtggtgccagatgaagacagctggttaccccaatgtcaacattcacaactttacaaca
agctggagggacgggatggctttcaatgcactaatacataagcacaggcctgatctgatt
gattttgacaagctgaagaaatcaaatgcacactacaatctgcagaatgcttttaacctt
gcagagcaacaccttggtcttactaagctcctggaccccgaggatatcagtgttgatcat
cctgatgaaaagtcaatcatcacctatgtggtgacatattaccactacttctccaagatg
aaagctttagctgttgaaggaaaacgtattggaaaggtgcttgacaatgccattgagacg
gagaaaatgattgaaaaatacgaatcgctggcttctgaccttctggagtggattgagcaa
accattatcatcctcaacaatcgcaaatttgccaactcgctagttggtgtgcagcagcag
ctacaggcattcaacacttaccgcacagtagagaaaccacccaaatttacagaaaaagga
aacctagaagtgctgctttttaccatccaaagcaaaatgagagccaacaatcagaaagta
tacatgccaagggagggcaaactcatctctgacattaacaaggcctgggaaagactggaa
aaagctgaacatgaaagagaactggcactgcgaaatgagctcatcagacaagagaaactg
gaacaacttgcacgcagatttgatcgcaaggcagctatgagagaaacttggctgagtgaa
aatcaacgtctcgtttctcaggataattttggctttgaccttccagcagtagaggccgca
actaaaaagcacgaggccattgaaacagacatcgcagcatatgaagaacgagtccaggcc
gtggttgcggtcgcgaaggagcttgagactgaaaattaccacgatatcaaacgtattact
gcgagaaaggacaacgttatacgcctatgggagtatctcctggagctgctcagggcacgg
agacagcggctggagatgaatcttggtctgcaaaagattttccaggaaatgctgtacatt
atggactggatggatgagatgaaggtgcttctgctgtctcaagactatggcaaacatttg
ttaggagttgaagacctgttgcagaaacatgctcttgtggaagctgacattgctattcag
gctgagagagtgagaggggtcaatgcatctgcacagaagtttgccaccgatggagaaggt
tacaaaccgtgtgacccgcaggttatcagggaccgcgtcgctcacatggagttctgttac
caagagctgtgccagctcgcagctgagcgccgggcccgcttggaggagtcccggcgcctc
tggaagttcttctgggaaatggctgaagaggagggttggatcagggagaaggaacagatc
ctgtcatctgatgactatgggaaggacctaaccagtgtcgtccgtctcttgagtaaacat
aaggcgtttgaagacgaaatgagtggtcgtagcggccactttcagcaggcgataaaagaa
ggtgaagacatgattgcggaggagcattttgggtctgagaaaatcagagaaagaattaag
gatatccgggagcagtgggctaacttggaacagttatcggccattaggaagaagcgcctg
gaggaagcctctctccttcaccagttccaggctgacgctgatgatatcgatgcatggatg
ttggacatcctcaaaattgtctccagtaatgatgttggccacgacgaatattccactcag
tccttggtcaagaaacacaaagatgtggctgaagagattgcgagctaccggccaaccatt
gactcgcttcacgagcaagcaaaggctctaccacaggaacacgccggatccccagatgtg
caaggcaggttgtccggaatagaggaaagatacaaagaggttgctgagctgactcggctg
cgtaaacaggccttgcaggatacccttgctctttataagatgttcagtgaggcagatgct
tgtgagctttggattgacgaaaaggagaagtggctgaataatatgcagattccagagaag
ctggaggacctggaagtgatccagcacagatttgaaagcttagaaccagaaatgaacaat
caggcatcccgtgttgcagtagtgaaccaaattgctagacagctaatgcacagcggccat
ccaagtgagaaggagatcaaagcacagcaagataaactcaacacaagatggagccagttc
agagaactggtagataggaagaaggatgctctgctctctgctctgagtatccagaactac
catcttgaatgtaatgaaaccaaatcctggatcagggaaaagaccaaagtgatcgaatcc
acacaagatctgggtaatgatctagctggagtgatggccctgcagaggaagctgacgggc
atggaacgtgacctggtagccatcgaagccaagctaagcgaccttcaaaaagaggcagaa
aagttggaatcagagcatcctgaccaggcacaggctatcctttcacggctcgcagaaatc
aacgacgtatgggaagaaatgaagaccaccctcaagaaccgggaagagtcccttggagag
gcaagcaaactgcagcagttcctgagagatctggatgacttccagtcttggctatccaga
acgcagaccgcaattgcatccgaagatatgcccaacacactgacagaggctgagaagctg
ctgactcaacatgagaatatcaagaatgaaatcaacaattatgaggaagattaccagaaa
atgcgggacatgggtgagatggtgacacaagggcaaactgatgctcagtacatgttctta
cgccagcgcctacaagctttggacactggatggaatgagcttcacaaaatgtgggagaac
aggcaaaatctcctttcccagtctcatgcctaccagctgtttctcagagataccaagcaa
gcagaagcatttcttaataaccaggagtatgttttggcgcacacggaaatgcccactacc
ttggaaggagcagaagctgctattaaaaaacaggaggatttcatgaccacgatggatgcc
aatgaagaaaagattaatgcagttgtggagactggcaggaggctagttagtgatgggaac
attaactctgataaaatccaggagaaagtggactctattgatgacagacataggaagaac
cgtgaagcagccagtgaacttctgatgagactgaaagataacagggatcttcagaagttc
cttcaggattgtcaagagctctcactctggatcaatgaaaagatgcttacagcccaggat
atgtcctatgatgaggcaaggaacctgcacagcaaatggctgaagcatcaggcatttatg
gcagaacttgcatccaacaaagaatggctggagaagattgaaaaggagggaatgcagctc
attgcagagaaaccagagactgaagccgtagtgaaagaaaagctgacaggcctccatcaa
atgtgggaagagcttgaatccactacccagaccaaggctcagcgtctctttgatgcaaac
aaggcggagctttttacccagagctgtgctgatttggataagtggctgaatggtttggag
agtcaaattcagtcagacgactacggaaaagatctcaccagtgtcaacatcctgttgaag
aagcagcagatgctagagaaccaaatggatgttcgtaagaaggagatagaggagctgcaa
agccaggcgagggctttaagtcaagaggggaagagtacagatgaagtcgatggcaaacgc
cttactgtagaaaagaaatttttggagttgttggaacctttgaatgaaagaaaggcaaac
ctgctggcctccaaagagatccaccagttcaaccgggatgtggaggatgaaattttgtgg
gtcggcgagaggatgcctatagctacatctactgatcatggacacaacctccagactgtt
cagctactaataaagaaaaatcagacccttcagaaagaaatccagggacatcagcctcgt
atcgacgacatttttgagaggagtcaaaacattatcacagagagtagccctaatgctgaa
gcaattcagcagaggcttgcagacttgcagcagctgtggaacctcctaatcgaggagaca
gagaaacgccacaagcgcctagaggagtctcacagagcgcagcagtattactttgatgct
gccgaggctgaggcctggatgagtgagcaggagctctacatgatgtcagaagagaaagcc
aaggatgaacagagtgcagtgtccatgctgaagaagcaccagattttggaacaagctgta
gaagactatgctgaaactgtgcaccagctttcaaagaccagcagaactttggtggcagat
aatcacccagaaagtgagcgtatcagcatgcgccagtccaaagtggataagctgtatgca
ggcctgaaggatctagctgaagagagacgaggcaagctggatgagagacacaggctgttc
cagcttaaccgcgaggtggatgacctggagcagtggattgctgaaagggaggtggtggca
ggatcccacgagctggggcaggactacgaacacgtaacgatgctacaggagcgattccga
gaatttgcccgagacactggaaacattggacaggagcgtgtcgatactgttaaccacatg
gcagacgagctcatcaactctggacattcagacgctgcgacaattgcggagtggaaggac
ggactcaacgaggcctgggctgatctcctggagcttattgacacgagaacacaaattcta
gcagcctcttacgaactgcacaagttttaccatgatgccaaggagatcttagggcgtatt
caagacaaacacaagaaactgcctgaagagcttggtagagaccaaaacacagtggaaaca
ctacagagaatgcacacaacatttgagcatgatatccaggcactcggcacccaggtgagg
cagctgcaggaggatgccgcacgccttcaggctgcctatgctggagacaaagctgatgac
atccagaagagggaaaacgaggtcctggaagcatggaaggcgctgctggatgcctgcgag
ggccgcagggttagactggtggacacaggagacaaattccgtttcttcagcatggtccgt
gatctcatgctttggatggaagacgttatccgacaaatagaagcccaagaaaagccaagg
gatgtttcgtctgttgaactactaatgaacaatcaccagggtatcaaagcagaaatcgat
gcccgaaacgacagctttactacctgcattgagctcggcaaatctcttctggcgagaaaa
cactacgcatcagaggagatcaaggaaaagctgctgcagctgacagaaaagagaaaagaa
atgattgacaaatgggaagacagatgggagtggctgagactgattttggaggtacaccag
ttttcaagagacgcaagtgtggctgaggcctggctgctgggacaggagccctacctatcc
agtcgtgaaataggtcaaagtgttgatgaagtggaaaaattaattaagcggcatgaagca
tttgaaaaatccgcagctacgtgggacgagagatttgcagcgctggaaagactgaccacg
ttggaactgctggaagtacgtcggcaacaagaggaagaggagaggaagaggcagccgccc
accccagagccaagcccaaaggttgcagaggatgcagactcccagcagcaatgggatggg
acaaaaggagaacaggtttcccaaaatggtttgccgtcagaccaggaatctccacgggtg
gcagaaactgcagaaacaaacgaaatggtcaatggagctgcagaacagaggacaagttcg
aaagagtcgagtcctgttccttctccgacggcagaccgcaaagccaagaccgcaattcag
gcccagactgctgctaccctaccagccaaaacacaggagattccttcagctcagatggag
ggcttcttacatcgcaaacatgagtgggagacacacagcaagaaagcctcgagcagatca
tggcataacgtgtactgtgtcataaacaaccaagagatgggcttctacaaggattcgaaa
gctgctgcttctggcatcccctaccacaacgagattcctgtcagcttgaaagaagcagtc
tgtgaaatagcggtcgattataaaaagaaaaagcatgtgttcaagctaagattgactgat
ggcaacgaatacctcttccaagccaaagacgatgaggagatgaacacgtggattcaggcc
atcacatcagcgatctcttctgataaaatcgaagtgtccccgaccacccagagcactcca
gcctccagccgtgcccagaccctgcccgccagcgtcacgataaccagcgagtccagccct
ggcaagcgggagaaagacaaagagaaagacaaagagaaaagattcagcctttttgggaaa
aagaagtga
DBGET
integrated database retrieval system
