Nipponia nippon (crested ibis): 104022652
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Entry
104022652 CDS
T05756
Symbol
PRPF4
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
nni
Nipponia nippon (crested ibis)
Pathway
nni03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nni00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104022652 (PRPF4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nni03041
]
104022652 (PRPF4)
Spliceosome [BR:
nni03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
104022652 (PRPF4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
EIF3I
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
ANAPC4_WD40
PRP4
WDR90_beta-prop_4th
WD40_MABP1-WDR62_1st
Beta-prop_EML
Beta-prop_DCAF4
NBCH_WD40
Beta-prop_TEP1_C
Beta-prop_SCAP
Beta-prop_IFT122_1st
Beta-prop_Vps41
Beta-prop_IFT140_1st
Beta-prop_EIPR1
WD_LRWD1
WD40_like
Beta-prop_WDR35_TULP_N
Beta-prop_WDR11_1st
Motif
Other DBs
NCBI-GeneID:
104022652
NCBI-ProteinID:
XP_009474672
LinkDB
All DBs
Position
Unknown
AA seq
528 aa
AA seq
DB search
MQRLQLKRGLAPLQHSESDSETRLGKASSSKATKSKPAEESDAPPPKRAPIFYGSLEEKE
RERLAKGESGLLGKEGMKAAIEAGNINISSGEVFDLEDHMSERQAEVLAEFERRKRARQI
NVSTDDSEVKACLRALGEPITLFGEGPAERRERLRNILSVVGTDALKKTRKDDDRSKKSK
EEYQQTWYHEGPRSLKTARLWLANYSLPRAVKRLEEARLLKEIPEATRTSQRQELHKSLR
SLNNFCSQIGDDRPLSYCHFSPNSKLLATACWSGLCKLWSVPDCNLVHTLRGHNTNVGAI
VFHPKSTVSLDKKDVNLASCAADGSVKLWSLESDEPVADIEGHSMRVARVMWHPSGRFLG
TTCYDHSWRLWDLEAQEEILHQEGHSKGVYDIAFHTDGSLAGTGGLDAFGRVWDLRTGRC
IMFLEGHLKEIYGVNFSPNGYHVATGSGDNTCKVWDLRQRKCIYTIPAHQNLVTGVKFEP
NHGTHPGWSPLKTLAGHEGKVMGLDISLDGQLIATCSYDRTFKLWTAE
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atgcagagactgcagctgaagcgggggctggcgcctctgcagcattcagaaagtgactcc
gagacaagattaggaaaagcttcctcttctaaagccacaaagagcaagcccgcagaggag
agcgatgctcctccgcccaagagagcgcccatcttttatggcagtttggaagagaaggaa
agggagcgtctggcaaaaggagaatcggggctgctgggaaaagaagggatgaaagctgcg
atcgaggctggcaacatcaacataagcagcggtgaggtctttgatctcgaagaccacatg
agcgagcggcaggcggaagtgctggctgagtttgagcgcaggaagagagcccggcagatc
aacgtgtccactgacgactccgaagtgaaagcctgtctgcgagcactcggggagcccatc
acgctctttggagaaggtcctgcagaaaggagggagagattaagaaatatcctttcggtg
gttggcacagatgcattaaaaaagaccaggaaagatgacgacaggtctaaaaaatccaaa
gaagagtatcagcaaacctggtaccacgaaggaccacgcagtctgaaaacagcaaggctg
tggcttgctaactactcgctccccagggcagtgaagcggctagaagaagcccggctgctc
aaagagatcccggaggcaaccaggacatcgcagagacaggagctacacaaatccctccga
tccttgaataacttctgcagtcagattggagacgatcgcccactgtcctactgccacttc
agccccaattccaagctcctcgctacagcctgttggagcggattgtgcaagctctggtct
gtgcctgactgcaaccttgttcacaccttacgaggacataacaccaacgtaggagcaata
gtcttccatcccaaatccaccgtctccctagacaagaaggacgttaacctggcctcgtgt
gcggctgatgggtctgtcaaactctggagccttgaaagtgatgaaccggtggcagatatt
gaaggacacagcatgagagtggcacgtgtgatgtggcacccatctgggaggttcctgggc
actacctgctatgatcactcgtggcgcttgtgggacttggaagctcaggaagagattctc
catcaggaggggcacagcaaaggggtctatgacattgcctttcacacggatggctctctc
gctgggactggcggtctggatgcttttggccgggtgtgggacttgcgcacgggacgctgt
atcatgtttctagaaggccacctgaaggagatctacggggttaacttctccccaaacgga
taccacgtcgcaactggtagtggtgacaatacttgcaaggtgtgggacctccgccagagg
aagtgcatctacaccattcctgcccatcagaacctggtgaccggggtgaaatttgaaccc
aatcacggtactcaccccggctggtcccctttgaaaacgctggctgggcatgagggcaag
gtgatgggactggacatctccctcgacggccagctgatagcgacctgctcctatgacaga
accttcaagttgtggacggcggagtag
DBGET
integrated database retrieval system
