Nipponia nippon (crested ibis): 104022835
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Entry
104022835 CDS
T05756
Symbol
VPRBP
Name
(RefSeq) protein VPRBP
KO
K11789
DDB1- and CUL4-associated factor 1 [EC:
2.7.11.1
]
Organism
nni
Nipponia nippon (crested ibis)
Brite
KEGG Orthology (KO) [BR:
nni00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
nni01001
]
104022835 (VPRBP)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nni04121
]
104022835 (VPRBP)
Enzymes [BR:
nni01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
104022835 (VPRBP)
Protein kinases [BR:
nni01001
]
Serine/threonine kinases: Other
Other
104022835 (VPRBP)
Ubiquitin system [BR:
nni04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
104022835 (VPRBP)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
EIF3I
WDR55
ANAPC4_WD40
LisH
Beta-prop_WDR19_1st
Beta-prop_WDR90_POC16_2nd
WD40_WDHD1_1st
Motif
Other DBs
NCBI-GeneID:
104022835
NCBI-ProteinID:
XP_009474873
LinkDB
All DBs
Position
Unknown
AA seq
1505 aa
AA seq
DB search
MTSGSGHVDSKAELTALLEQWEKEHGSGQDMVPILTRMSELIEKETEEYRKGDPDPFDDR
HPGRADPECMLGHLLRILFKNDDFMNALVNAYVMTSREPPLNTAACRLLLDIMPGLETAV
VFQEKEGIVENLFKWAREADQPLRTYATGLLGGAMENQDIAANYRDENSQLVALVLRRLR
ELQVTEMTTKQENKRPSPRKVPSDPLLPLDEEAVDMDYGEMAVDGEQEEVPGDMEISFHL
DSSHKTSSRVNSATKLDDGGLRKSKSGKQHERDGFRKAKQKLGFSASEPERMFVELSNSS
WSEMSPWVIGTNYTLYPLTPAIEQRLILQYLTPLGEYQELLPIFMQLGSRELMMYYIDLK
RTNDVLLTFEALKHLASLLLHNKFATEFVAHGGVQKLLEIPRPSMAATGVSMCLYYLSYN
QDAMERVCMHPHNVLSDVVNYTLWLMECSHASGCCHATMFFSICFSFRAVLELFDRHDGL
RRLVNLISTLEILNLEDQGALLSDDEIFASRQTGKHTCMALRRYFEAHLAIKLEQVKQSL
QRTEGGILVHPQPPYKACSYTHEQIVEMMEFLIEYGPAQLYWEPAEVFLKLSCVQLMLQL
ISIACNWKTYYARNDTVRYALDVLAILTVVPKIQLQLAEPVDVLDEAGSTVSTVGISIIL
GVAEGEFFIHDAEIQKSALQIIINCVCGPDNRISSIGKFISGTPRRKLPQAPKSSEHTLA
KMWNVVQSNNGIKVLLSLLSIKMPITDADQIRALACKALVGLSRSSTVRQIISKLPLFSS
CQIQQLMKEPVLQDKRSEHVKFCKYAAELIERVSGKPLLIGTDVSLARLQKADVVAQSRI
TFPEKELLLLIRNHLISKGLGETASVLTKEADLPMTAASHSSAFTPVAAAASPVTLPRTP
RIANGISARLSSHTSVGSTATSVHAQARPSASQGPLALPGPSYASNSPLIGRISFVRERP
SPCNGRKIRVLRQKSDHGAYSQSPAIKKQLDRHLPSPPTLDSIITEYLREQHARCKNPVA
TCPPFSLFTPHQCPEPKQRRQAPTNFTSRLTRRAAFPKYGGVDGGCFDRHLIFSRFRPIS
VFREANEDESGFTCCAFSARERFLMLGTCTGQLKLYNVFSGQEEASYNCHNSAITHLEPS
RDGSLLLTSATWSQPLSALWGMKSVFDMKHSFPDDHYVEFSKHSQDRVIGTKGDIAHIYD
IQTGNKLLTLFNPDLANNYKKNCATFNPTDDLVLNDGVLWDVRSAQAIHKFDKFNMTISG
VFHPNGLEVIVNTEIWDLRTFHLLHTVPALDQCRVVFNYTGTVMYGAMLQADDEDDLLEE
RMRSPFGSSFRTFNATDYKPIATIDVKRNIFDLCTDSKDCYLAVIENQGSMDAMNMDTVC
RLYEVGRQRLAEDEEDEEEDQEEEEQEEEDDDEDDDDTDDLDELDTDQLLEAELEEDENN
ENAGEDGENDFSPSDDEELANLLEEGDEGEDEDSDADEEVELILGDTDSSDNSDLEDDII
LSLNE
NT seq
4518 nt
NT seq
+upstream
nt +downstream
nt
atgacttcaggatctgggcatgtggactccaaggctgagctcactgctttgcttgagcaa
tgggagaaagaacatggcagcgggcaagacatggtccctattctcaccagaatgtctgag
ctgattgagaaggagactgaagagtatcgcaaaggggatccagacccatttgatgaccga
cacccaggtcgagcggacccagagtgcatgcttggtcacttattgcggatacttttcaag
aatgatgatttcatgaatgcgctagtgaatgcttatgtgatgacaagcagagaacctcca
ttaaacactgctgcgtgccgacttcttctggatatcatgccaggactggaaacagctgtt
gtctttcaggaaaaggaaggcatagttgaaaatctctttaagtgggcgcgagaggctgat
cagccgctaaggacatatgcaacggggctattaggaggagctatggaaaaccaagatatt
gctgcaaattaccgggatgagaactcacaactggtggctttggtgcttcgacggctacga
gagttacaggttactgaaatgactacaaaacaagaaaacaagcgtcccagtcctcgcaaa
gtgccatcagatcctctgctgcctctagatgaagaggctgtggatatggattatggggag
atggcagtagatggagagcaagaggaagttcctggggatatggagatctcctttcatctt
gattcaagtcacaagaccagtagcagagtaaactctgctacaaagctagatgatggggga
ctgagaaaaagcaaatcagggaaacagcatgaaagagatggcttccgtaaggccaagcaa
aagctgggcttctccgcttcagaaccagagcggatgtttgttgaactgtccaacagcagc
tggtcagaaatgtccccgtgggtgattggcactaattacacactttaccctttgactcct
gccatagagcagaggctcattcttcagtacctgactcccttaggggagtaccaagagcta
ctacccatctttatgcaactgggatcaagggagctgatgatgtactacattgatttgaag
cgaaccaacgatgtgctgcttacttttgaagcccttaagcacttggcatcattgctgctg
cacaacaagtttgcaacggagtttgttgctcatggaggagtgcaaaagttgctggagatt
cctcgtccttccatggcagcaacaggggtttccatgtgcttatattatttgtcttacaat
caagatgccatggagagggtgtgcatgcacccccataacgtgctttcagatgtagtaaat
tacaccttatggctaatggagtgctcccatgcctcaggctgctgccatgctaccatgttc
ttctccatttgcttctccttccgtgctgttctggagctctttgacaggcatgatggcctt
cgacgtctggttaacctgataagcacgcttgaaatcttaaacctggaagaccaaggagcc
ctcttgagtgatgatgagatctttgccagtcgccagactgggaaacacacctgcatggcc
ttgcgtagatactttgaggctcaccttgctatcaaactcgaacaggtgaagcagtcactc
cagcgcactgaaggtggcattctggtccatccgcagcccccctacaaggcctgttcgtat
actcatgagcagattgtagagatgatggagttcctgattgagtatggtccagcacagctc
tactgggagccagcagaggtttttctcaaattgtcttgtgtccaactcatgcttcagctc
atttcaatagcatgcaactggaagacatactatgcaaggaatgacacagtacgatacgct
ttggatgtactagccatcctgactgtggttcctaaaatccagttgcagctggcagaacct
gtggatgtgttagatgaagctggatctactgtttccactgtgggtattagtatcatcctt
ggagttgctgagggtgaatttttcatccacgatgccgaaattcagaaatcagcccttcag
atcatcatcaattgtgtatgtggcccagacaatcggatctccagtattggcaaattcatc
tctggaactcctcggcgaaagctccctcaggcccccaagagcagcgagcacacattagct
aagatgtggaatgtggtacagtccaacaatggcatcaaagtgctgctgtcgttgctgtct
ataaagatgcctatcacagatgcagatcagatccgagcattagcctgcaaagccttggtg
gggctctcacgcagcagtactgtccggcagattatcagcaagctccccctcttcagcagc
tgtcaaattcagcagctgatgaaagagccagtgcttcaggacaagcgcagtgagcacgtg
aagttctgcaaatatgctgccgagctgatagagcgtgtctcggggaagccgttgctgatt
ggcacagatgtctctctggctcggttgcagaaagcggatgtggtggcccagtcaaggatc
acgtttcctgagaaggagctgctgctcctgattcggaaccatctcatctctaagggccta
ggagaaaccgcatctgtccttactaaagaggctgacctacccatgactgcagcatctcat
tcatctgctttcacccctgttgcggctgctgcttctcctgtgaccctgcctcgcactcct
cgcatagctaatggcatctcagctcgtttgagtagccacacttctgtaggttccactgcc
acctctgtccatgctcaggcaaggccatctgcatcccaaggcccacttgcccttccaggc
ccttcttatgccagcaactctcctctgattggcaggattagctttgtcagggagaggcca
tctccctgcaacggcagaaaaatcagagtgttgcgacaaaaatcggaccatggcgcatac
agccagagcccagctatcaaaaagcagctggacagacaccttccttccccacccacgctg
gacagtataatcacagagtaccttagggagcagcatgcccgctgcaagaaccctgttgcc
acctgtccccctttctctctctttactccccaccagtgtcctgagccaaaacagaggcgt
caagcgccaactaactttacctcacggctgacccgcagggcagcctttccgaagtacgga
ggggtggatggtggctgctttgatagacacctaatatttagcaggttccgtccaatttct
gtgttcagggaagcaaatgaggatgagagtggctttacctgttgcgcgttttctgccaga
gaacgattcttaatgctgggtacttgcacggggcagctgaaactctataacgtattcagt
ggacaggaagaggccagttacaactgccataactctgccatcacgcaccttgagccatct
agggatggatctttattgctgacatctgctacgtggagccaacctctgtctgcattgtgg
ggaatgaagtctgtctttgatatgaagcattccttccctgatgaccactatgtggagttc
agcaagcactctcaggatagggtcattggcacaaaaggagacattgcccatatctatgat
attcagactggcaacaagctattgactctgtttaacccagatcttgccaacaactataag
aagaactgtgccacctttaaccccactgatgaccttgtcctaaatgatggtgtcctctgg
gatgtcagatcggcacaagccatccacaagtttgacaaattcaacatgactatcagtggt
gttttccatcccaatgggctagaggtcatagtcaacacagaaatttgggacctccgaact
ttccatttgttacacacagtacctgcactggatcagtgtcgtgtggtcttcaattatact
ggcacagttatgtatggagctatgttgcaggcagatgatgaagatgaccttctggaggag
agaatgcgaagtccctttggctcttctttcaggacatttaatgcaactgattataaacct
atagctaccatagatgtaaagcggaatatctttgacttgtgcacagacagcaaggactgc
tatctggctgtcattgagaatcaagggagcatggatgccatgaacatggatacagtttgc
agactgtatgaagtgggcaggcagcgtttggcggaagatgaggaggatgaagaagaagat
caggaggaagaagagcaagaggaagaagatgatgatgaagatgatgatgatacagatgac
cttgatgaactagatacggaccagctgctggaggctgagctggaggaggatgagaacaat
gagaatgctggtgaggatggagaaaatgacttttctccctccgatgatgaggagcttgcc
aacctcctggaagagggagatgagggtgaagatgaagattctgatgctgatgaggaagtt
gagctgattcttggagatactgacagctcagataactctgacttggaggacgacataatc
ctgtctctgaatgagtga
DBGET
integrated database retrieval system
