Nipponia nippon (crested ibis): 104023030
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Entry
104023030 CDS
T05756
Symbol
SPATA13
Name
(RefSeq) spermatogenesis-associated protein 13 isoform X1
KO
K05769
Rho guanine nucleotide exchange factor 4/29
Organism
nni
Nipponia nippon (crested ibis)
Pathway
nni04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
nni00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
104023030 (SPATA13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nni04131
]
104023030 (SPATA13)
Membrane trafficking [BR:
nni04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
104023030 (SPATA13)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RhoGEF
SOS1_NGEF_PH
PH
SH3_1
SH3_9
SH3_2
RHG20_PH
PH_5
Motif
Other DBs
NCBI-GeneID:
104023030
NCBI-ProteinID:
XP_009475081
LinkDB
All DBs
Position
Unknown
AA seq
1274 aa
AA seq
DB search
MTTFPNGCGNGTTITCIVMDNKEPQNQTTCVSHNGGYRTSNSHEEESQEDKLSPSKIMRF
FTAPRTRANSSSDRPRSLVLMGSSSTWNALSSIRKMGSFKKLKSSVLQGIQTRECSDILN
ENGVGKHGSNGAVVRVQTNRYSYSGPLHDFQNTVDGLASDCSDAEESDESFLRNTHRSRS
IRRAYGAGRINLLDTDKVQSHHNCTRPTSPVIAEPKMCEILVKDSENNRIIYRRSKSSDN
LNFLKKSSFKRKSTSNLTDLKVANEKQMPARTVSVTSADSDKTSGNPERRSKRWKSPIRA
KDFDRVLKLVSNVTDVAWKKDGPKSAAPSPSEQSQRTRSNSRLHDDYSRRVSSSTDHDRK
RCTSPVSSPDSSFPGTPCLQSPTVAQDKEAEMNVAVAEDKSLRTSSGIPDSDSLSPTLND
ISPFPNEVFYSDSDEPKATQQFTCEAENPHVPVRPTTPKPQSPTAEKVKCNMNFQCPNHH
STLSLSSSESEERVEVPGLKLGKNPVCFQDSVQTVYYDDGNEDSGISSHSQLSLNLASGA
EEKKEEIRVVSDDHWKRSPSHDEEKTDTQKVTPRRWGSGKRSRPRPLSDYGQISIRSFSI
PEDAVAVESQKTDCTDGENQPGLASVGSVIQSNTVGYHRGRKRRPISVIGGVNFYGSGPA
EEIEGLLTQPVTRPPVPAHQVPPYKAVSARFRPLTFSQSTPIGLDRVGRRRQMRTSNVAA
DGGTESSALVDDNGSEEDYSYEELCQATPRYLQPGGEQLAINELISDGSIVYAEALWDHV
TMDDQELGFKAGDVIRVLEASNKDWWWGRNEDKEAWFPASFVRLRVNQEEVPENCSSIQD
EEQDADISKHRQKIAENKDQMRTNVIQEIMNTERVYIKHLKDICEGYIRQCRKHTGMFTT
AQLSTIFGNIEDIYKFQRKFLKDLEKQYNKEEPHLSEIGSCFLQHQEGFAIYSEYCNNHP
SACIELSKLMKQGKYRHFFEACRLLQQMIDIAIDGFLLTPVQKICKYPLQLAELLKYTTQ
EHSDYNNIKAAYEAMKNVACLINERKRRLESIDKIARWQVSIVDWEGPDVLARSSELIHS
GELTKISKQGKSQQRTFFLFDHQLVFCKKDLLRRDILYYKDRIDMDEMEIVDTEDGRDKD
FNINVKNAFKIINRATEEIHLFCAKKQGDKKRWMEACESERRRVQEDKEMGMEISENQKK
QAMQNARKSRHGKIKGSYNGCPVPPPHQSLHPIHQRHITVPTSIPQQQVFALAEPKRKPS
LFWHTFNKLTPFKK
NT seq
3825 nt
NT seq
+upstream
nt +downstream
nt
atgacaacgtttccgaatggctgtggaaatggcaccaccattacttgtatagttatggat
aataaagagccccaaaaccagacgacctgtgtcagtcataatgggggatacaggaccagc
aacagtcatgaggaggaaagtcaagaggataagcttagcccttccaaaatcatgcgcttt
ttcaccgctcctcggacacgggctaattccagctctgacaggcctcgttctctggttttg
atgggcagctcatccacgtggaatgctttgtcttccatcagaaaaatgggatctttcaag
aagttgaaatcttcagttctccaaggaattcaaaccagggaatgctcggacatcttaaat
gagaacggtgtaggcaaacatggttcaaatggggcagtggtgagagttcagacgaacagg
tattcctattcggggcctctacatgatttccaaaacacagtggatggtttagcttctgac
tgctctgatgcggaggagagcgatgagtctttcctgaggaatactcatcgctcacgcagc
atcaggcgggcttatggtgctgggcgcataaacttgctagacacggataaagttcagagt
catcacaactgtactaggccaacatcacctgtcatcgcagagccaaagatgtgtgaaatt
ttggtgaaagactctgaaaacaacaggatcatttatcggagaagcaaaagttcggataat
ttgaactttctgaaaaaaagctcattcaaacggaagtccacctcaaacctcaccgacctc
aaggttgcaaatgaaaaacagatgccagcaaggactgtgagtgttacttctgctgactcg
gacaaaaccagtgggaaccccgagaggagatccaagcgatggaagagccctatcagggca
aaggattttgaccgagttttgaaacttgtcagtaatgttacagatgttgcatggaagaag
gatggccctaaaagcgccgctccttctcccagtgagcagtcccagagaacaaggtcaaac
agcagactgcacgatgactactcccgcagggtttccagcagcacggatcatgacagaaag
agatgcacttccccggtatctagtccagactcttcctttccgggaacaccttgtctgcaa
agccccacagttgctcaggataaagaggctgaaatgaatgtagctgttgctgaagacaaa
agcctcaggacgtcgtcaggtatcccagactctgatagcttatcacccacgctgaatgac
attagtccatttcccaacgaagtgttttattcggactcggatgaaccaaaagctacccag
cagtttacatgtgaagctgaaaaccctcacgttccagtcaggccgactactccaaagcct
caaagtcccactgcagagaaggtcaagtgcaatatgaatttccagtgcccaaaccatcac
agcacattgtcactgagctcatcggagagcgaggagagagtcgaggtaccagggctgaag
ctgggcaagaatcctgtttgcttccaggactcggtgcaaactgtgtactatgatgatgga
aatgaagacagtggcataagcagccactctcagctgagcctcaatttagcctctggagct
gaagagaaaaaggaagagataagggttgtttctgatgaccactggaagaggtccccatcc
cacgatgaagaaaagacagacacacaaaaggtcacacccaggagatggggctctggaaaa
agatctcgtcccagacctctctcagactatggccaaatatcgatcagaagcttctctata
ccagaagatgcagttgcggtggaatctcagaagacagactgcacggatggagaaaatcag
ccaggactggcttctgtcgggtctgtgatccaaagcaatacagtaggctaccacagaggg
cgaaaaagaagacccatctccgtaataggtggggtcaatttctatggaagcggtccagca
gaagagatagaaggtctgctgacacaacctgtaacacgtccacctgttccagcgcaccag
gtacccccttacaaagctgtttcagccaggttccggcccctcaccttttcacaaagtacc
cccatcggcctggaccgggttggacgaaggcggcagatgagaacatctaacgttgctgca
gatggtgggactgaatcttcagccttagtggatgacaatggcagtgaggaagattacagt
tacgaggagctctgccaagccactcccaggtacctgcagcccggaggggaacagctagca
attaatgagctgataagcgatggcagcattgtctacgcagaagctctctgggaccatgtg
actatggatgatcaagagctgggcttcaaagctggagatgtcattagagttctagaagct
tccaacaaagactggtggtggggaagaaacgaggacaaggaagcctggtttccagctagc
tttgtcaggctgcgagttaatcaggaagaagtgccagaaaattgtagtagtatccaggat
gaagaacaagatgcagatattagcaaacatcgtcagaaaatagctgaaaacaaggatcag
atgagaaccaacgttatacaggaaattatgaacacagaacgagtctatatcaagcatctc
aaggacatctgtgagggttatattcggcagtgtcgcaaacatacaggaatgttcaccaca
gctcagttaagcaccatttttggaaatattgaagatatttacaagttccaaaggaagttt
ctgaaggatcttgagaaacagtacaacaaagaggaacctcatctaagtgaaatagggtca
tgttttcttcaacatcaagaaggctttgctatttattcagagtattgcaacaatcatccc
agtgcctgcattgaactttccaaactaatgaaacagggcaaataccgtcacttctttgag
gcctgtcgcttgcttcagcagatgattgacattgccattgatggttttcttctcacgccc
gttcagaaaatctgcaaataccctctgcagcttgcagaattgctcaaatacaccactcag
gagcacagtgattataacaacataaaagctgcatatgaggctatgaagaatgtagcatgc
ctgatcaatgagcgaaaacgaagactagaaagcatagacaagattgcacgttggcaagtc
tctattgtagactgggagggaccagatgtgttggccagaagctcagaactgatccactca
ggagaactgaccaaaatatcaaagcaaggcaaaagccagcagaggactttcttccttttt
gaccatcagcttgtgttctgtaagaaggacttactgagaagggacatcttgtattataag
gatcgtattgacatggatgagatggaaattgtggacactgaagatggcagagacaaagac
tttaacattaatgtcaagaatgcttttaagataataaacagagcaacagaagagattcat
ttgttctgtgcaaaaaaacagggggataaaaagagatggatggaggcttgtgaaagtgaa
aggagaagagttcaggaagacaaggaaatgggaatggaaatctcagaaaaccagaagaaa
caagccatgcagaatgcccgtaagtcaaggcatggaaaaattaaaggtagctataacggg
tgtcctgtgcctcctccacaccaaagcctgcatcctattcatcagcgccacatcactgtg
cctaccagcatcccgcagcagcaggtttttgccctggcagaacccaagcggaagccatcc
ctcttctggcataccttcaacaaactcaccccctttaaaaagtga
DBGET
integrated database retrieval system
