KEGG   Nipponia nippon (crested ibis): 104023200
Entry
104023200         CDS       T05756                                 
Symbol
RXRA
Name
(RefSeq) retinoic acid receptor RXR-alpha
  KO
K08524  retinoid X receptor alpha
Organism
nni  Nipponia nippon (crested ibis)
Pathway
nni03320  PPAR signaling pathway
nni04148  Efferocytosis
nni04920  Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:nni00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04148 Efferocytosis
    104023200 (RXRA)
 09150 Organismal Systems
  09152 Endocrine system
   04920 Adipocytokine signaling pathway
    104023200 (RXRA)
   03320 PPAR signaling pathway
    104023200 (RXRA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:nni03000]
    104023200 (RXRA)
  09183 Protein families: signaling and cellular processes
   03310 Nuclear receptors [BR:nni03310]
    104023200 (RXRA)
Transcription factors [BR:nni03000]
 Eukaryotic type
  Zinc finger
   Cys4 hepatocyte nuclear factor 4-like
    104023200 (RXRA)
Nuclear receptors [BR:nni03310]
 2. Hepatocyte nuclear factor 4 like
  2B. Retinoid X receptor (RXR)
   104023200 (RXRA)
SSDB
Motif
Pfam: Hormone_recep Nuc_recep-AF1 zf-C4 tRNA_bind_3 CRT10
Other DBs
NCBI-GeneID: 104023200
NCBI-ProteinID: XP_009475269
LinkDB
Position
Unknown
AA seq 439 aa
MATPSLHPSIGPGIGSSLGSPGQLHSPISTLSSPINGMGPPFSVISSPMGPHSMSVPSTP
SLGFGTSSPQLNSPMNPVSSSEDIKPPLGLNGVLKVPAHPSGTMASFTKHICAICGDRSS
GKHYGVYSCEGCKGFFKRTVRKDLTYTCRDNKDCLIDKRQRNRCQYCRYQKCLAMGMKRE
AVQEERQRGKDRNENEVESTSSANEDMPVEKILEAELAVEPKTETYIEANMGLTPSSPND
PVTNICQAADKQLFTLVEWAKRIPHFSELPLDDQVILLRAGWNELLIASFSHRSIAVKDG
ILLATGLHVHRNSAHSAGVGAIFDRVLTELVSKMRDMQMDKTELGCLRAIVLFNPDSKGL
SNPAEVEALREKVYASLEAYCKHKYPDQPGRFAKLLLRLPALRSIGLKCLEHLFFFKLIG
DTPIDTFLMEMLEAPHQMT
NT seq 1320 nt   +upstreamnt  +downstreamnt
atggccaccccatccctccacccgtccatcgggccgggcatcggctcctcgctggggtcc
ccgggccagctccactcacccatcagcaccctgagctcacccatcaacggcatgggacct
ccattctccgtcatcagctcccccatgggcccacactcgatgtccgtcccctccaccccc
agcctgggattcggcaccagcagcccgcagctcaactcgcccatgaaccccgtcagcagc
tcagaggacattaagccacccctggggctcaatggagtcctcaaagtgccagcacatccc
tcaggaacgatggcctccttcaccaagcacatatgtgccatctgcggggacaggtcttca
ggtaaacattacggggtttacagctgcgagggctgcaaaggcttcttcaagcgcaccgtg
cggaaagacctcacctacacctgccgcgacaacaaggactgcttgatcgacaagcgccag
cgcaaccgctgccagtactgccgctatcagaagtgtcttgcgatggggatgaagcgagaa
gccgtccaggaggagaggcagcgggggaaggaccgcaacgagaatgaggtggagtcaaca
agtagcgccaacgaggacatgcccgtggaaaagatcttggaagctgaactcgcagtggag
ccaaagacagagacgtacattgaagcaaatatgggcttgacgccgagctcgcccaatgac
ccggtgacgaacatatgccaggcagcagacaaacagctcttcaccctggtggagtgggcc
aagaggatcccccacttctccgagctgcccctggacgaccaggtcatcttgctcagagca
gggtggaatgagctcctaatcgcttccttctcccaccgctccatagccgtgaaagacggg
atcctcttagccaccgggctccacgtgcaccggaacagcgcgcacagtgctggcgtcggg
gccatcttcgacagagtactgacagaactcgtgtcaaaaatgcgagacatgcagatggac
aagacagagctaggctgcctgcgagccattgtcctcttcaaccctgactcgaaaggtctc
tccaacccggctgaagtggaggcgttacgggagaaggtgtacgcgtcgctagaggcatac
tgcaaacacaaataccccgaccagcccgggaggttcgcaaagctcttgctccgtctcccg
gccctccggtccatcggcctaaaatgcctggagcacctcttcttcttcaagctaataggc
gacacaccaatcgacaccttcttgatggaaatgctggaagcaccccatcaaatgacttag

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