Nipponia nippon (crested ibis): 104023207
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Entry
104023207 CDS
T05756
Symbol
SNAPC4
Name
(RefSeq) snRNA-activating protein complex subunit 4
KO
K09453
snRNA-activating protein complex subunit 4
Organism
nni
Nipponia nippon (crested ibis)
Brite
KEGG Orthology (KO) [BR:
nni00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nni03000
]
104023207 (SNAPC4)
03021 Transcription machinery [BR:
nni03021
]
104023207 (SNAPC4)
Transcription factors [BR:
nni03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-like factors
104023207 (SNAPC4)
Transcription machinery [BR:
nni03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
snRNA-activating protein complex (SNAPc)
104023207 (SNAPC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
SLIDE
HTH_Hrp3
BBP1_C
SANT_DAMP1_like
Motif
Other DBs
NCBI-GeneID:
104023207
NCBI-ProteinID:
XP_009475276
LinkDB
All DBs
Position
Unknown
AA seq
1490 aa
AA seq
DB search
MEREDDSSDDDIESSLPQDPETCLQMNHVYQEVIQEKIEEVELLIAQNREQQKEMMCELS
GPKIAKAGDGRNLPANIFLGHFMKPYFKDKTTGIGPPANEDAKEKAAQGIKSFEQLLSTK
WKSREKTLLQKSVVSDRLQRLLQPKLLKMSYWNQKLEKVKTEMEKQILEKQIKEVEREIE
AINQLPESDLLGNRFDEHDWEKISNIHFDGQRSSEELRKFWQNWEHPSINKKEWTEEEIE
RLKKIAAEHGYLDWQTIAQELGTNRTPFQCLQKYQVYNKDLKRKEWTKDEDRMLLELVQE
MRVGSHIPYKKIAYYMEGRDSAQLIYRWTKSVDPSLKKGPWTPEEDAMLLAAVKKYGARD
WYKIRTEVPGRSDAQCRDRYLKALHCDVKKGKWSLEEEEQLIELVQKHGLGHWSKIASEL
PHRTGSQCLSKWKLMIGSKKRSRPAKRRHVQESSTSSESSSEDIELDLADSSDSSEEETT
SKEECAFPSIDLWIPTRTNMQESNKGRYQTPSLFSPASADANTSSSEVPSAAGDGDKDRV
ADKSSELNTLLRGIARPHSTDIIVKNPVEVMNKASRCGKQVLRVTLENVRRVLRNNTCFQ
RKLQSKMLKPAAFLTKIFGGSTSVGEKLQGLQNITEKTYRQERERLRRMNLDRKLLMAVT
PWVGNVLLPCTLQTGKMAFHHTKADAIQEKIKSISLVSTPLFTLFIQLFQIDTNGCMKII
RERRLRQAELLRANARRPQQASQTMETSSGNSSQSCTQRNSRRGIPRNAVRRPVTLKARE
TSAPVFESSAPAMQGALPAQAQRQKPKTVSELLREKRLRESRAKKAMQRTVFVAPQMLVS
GPLIIQHPPQQIVPSAQAGSKPAAAGCANSQVQCAPAPLPAFTSVAGSTSATVVLENQSS
SVPETGESPGSSQGTERQCNKELKEQALESSPEGGFSPGMNPAAAEKVPHQGGCNGQVLA
GSSASVVLQNQAFLPHQITVVPVGIESGTNKLSLSTPVTCGLNSNGPQQRPVSLLPALVT
PQTGSHLIPNSILPFTWVVTPQALLPTAVQTVVGVPQGLPAAAVRSQTTVTSNGNVSGLG
APPVPAESSTPHSNSAETKAPSAQLAEGVPLGKTANHPTILLPVTSASPGCTTSNISSAT
PACSDGFSKASDSSAAQTALPPDAPTLHAVLLPQAQLPASTQGSDSQCVSSLPSLGKSHG
SITTNGSSSNPGIITKGIVIQPGHPVPHNNVPRNSDSFAPQALRNRPIACKPPTTQPADS
PPQPTTSSAEKNLLDFSLISLEEEGLVREWLNGKQGVQVPSLHTRLPYLPPFLCNLKTLS
KLLLQKAALEEQAACLLPSDAGQDEGTRVDLHAIRELVQQKLGDNPAYLLLKARFLAAFT
LPAVLATLSPPKVATTLSASRKQYEESDEEEWQSEKEVSEEESSGNEFTGVRSDWAAGDE
PGDKDADLLNQGMGAEENAAQSVLDSCTDVADASAPQIRRSARFRKRRRV
NT seq
4473 nt
NT seq
+upstream
nt +downstream
nt
atggaaagagaagatgacagtagcgatgatgatattgaaagtagtctgccccaggatcca
gaaacatgtctgcagatgaaccatgtgtaccaggaagttatccaggaaaagattgaggaa
gtcgagcttctcattgcacaaaacagagaacagcagaaggaaatgatgtgcgagctcagt
ggtccaaaaatagcaaaggcaggagatggtagaaatctaccagcaaatatatttttggga
cattttatgaagccatactttaaggataaaacaacaggaattggccctcctgccaatgaa
gatgccaaggaaaaggcagctcagggcataaaatcctttgaacaactgctttcaacaaaa
tggaaaagcagagagaagacattattgcagaaatcagtagtaagtgaccgcttgcagcgc
ctgcttcagccaaagttactgaagatgagttattggaatcagaaactggagaaagtcaag
actgaaatggagaaacagatcttggaaaagcaaatcaaagaagtggagcgagaaatagag
gcaattaaccaactcccagaaagtgacttgttaggaaacagattcgatgagcatgactgg
gagaaaatttcaaacatccactttgatggacaacgtagttcagaagaactgaggaagttt
tggcaaaattgggagcatccaagcatcaacaaaaaggaatggactgaggaggaaatagag
aggctaaagaagatagctgctgaacacggttatctggactggcagactatagcccaggag
ctggggacaaacaggacacctttccagtgcttgcagaagtatcaagtctataacaaagat
ttgaaaaggaaagaatggaccaaagatgaagatcggatgcttttagagcttgttcaagag
atgagagtaggaagtcatatcccatacaagaaaattgcttattacatggaaggaagagat
tctgctcagctgatttaccgatggacaaagagtgtggaccccagtttgaagaaaggaccc
tggacaccagaggaagatgctatgctgttggctgcagttaaaaagtatggagcacgtgac
tggtataaaattcggacagaagtgccagggaggagcgatgctcagtgcagagatcggtac
ttaaaagcattgcactgtgatgtaaagaaaggcaagtggagtttagaagaagaggagcag
ctaattgaactggttcaaaagcatggcctgggtcactggagtaaaatagcttccgaattg
ccacatcggactggctcccaatgtctaagcaagtggaaactcatgattgggtctaagaaa
agatctaggccagcaaaacgccgacacgtgcaagagagttccacctcttcagagagtagc
agcgaagacatagaactggacttagcagacagttcagacagttcagaggaggagacgaca
agcaaggaagagtgtgcatttcccagcattgatttgtggataccaacacggacaaatatg
caggagtcaaacaaaggaagataccaaactccatcccttttctctcccgcgagtgctgat
gcaaacaccagtagcagcgaagttccaagtgcagcaggtgatggagacaaggacagagtt
gccgataaatcgtcggagttgaacaccctcctgaggggcattgcacgtccacattcaacg
gacatcatagtgaagaatccagtagaagtaatgaacaaggcttcccgatgtggaaagcaa
gtgctacgggttaccctggagaatgtgagaagagtattaagaaataacacgtgctttcag
aggaaacttcaatcaaagatgctaaaacctgctgcctttttaacaaaaatatttggaggt
agtacttctgttggcgagaagcttcaggggctgcagaatatcacagagaaaacttatcgt
caagagagagagcgtttgagaagaatgaaccttgacagaaagcttctaatggcagtgaca
ccttgggtgggcaatgtactactgccttgcaccttgcaaactgggaagatggcttttcat
cacacaaaagctgatgccattcaagagaagattaagtctatcagccttgtgagcactcct
ctgttcacgcttttcattcagctctttcagattgataccaacggctgcatgaagattatt
cgtgagagaaggctaaggcaggcagagctgcttagggctaatgcaagaaggcctcagcag
gcttcccaaactatggagacttcttcaggcaattcatcacaatcttgtactcagaggaac
tcccgaaggggcataccaaggaatgctgtcaggagacctgttaccttaaaagcaagggaa
acttctgctcctgtctttgagagcagcgctcctgccatgcagggagctcttccagcccaa
gcgcaaaggcagaagcctaaaactgtctcagaattactgagagaaaagcggctaagagaa
tcccgggctaagaaagctatgcagaggactgtatttgttgccccacagatgctggtttcg
gggcctctgataatccagcacccgccacagcaaatcgttccttctgcacaagcagggagc
aaacctgcagcagctggttgtgcaaatagccaagtacagtgtgcaccagctccattgcca
gcatttacttctgttgcaggttcaacttctgccactgttgtgctcgaaaaccagtcctcg
tcagtgccagaaactggggaaagccctggttcctcacaagggacagaacgacaatgcaat
aaggaactaaaagagcaagctttggaaagtagccctgaaggagggttttctcctggcatg
aatccagctgcagcagagaaggtcccacatcagggagggtgcaatggtcaggtccttgct
ggtagctcagcttcagtggtgttgcaaaaccaagcttttctgccacatcagattacagtg
gtgcctgttggcattgagtctggcaccaacaaattgtctctttccacaccagttacctgt
gggctgaatagtaatgggccacaacagaggccagtcagtctattgcctgctcttgtaact
ccacaaactggttcgcatttgattcccaacagcatactgcctttcacatgggtcgtaacg
ccccaggctttgctccccaccgctgtacaaactgtggtgggtgttccccaaggactgcca
gctgctgctgtgagaagtcagacaactgtgacttccaatggcaatgtctctggcttagga
gcgcctcctgtaccagctgaatccagtacgcctcactccaacagtgcagagacaaaagca
ccaagtgcccagttagcagaaggagtacctttgggaaagacagctaaccatcccacaatt
ctcttacctgtgacctcagcgagtcctggatgcaccacatccaacatttcttctgcaaca
cctgcatgttcagatggcttctccaaggcttctgactcctctgcagctcagactgctctt
ccacctgatgcaccaaccctgcacgctgtgctgctgccccaagcacagctacctgcaagc
actcaagggtctgattcccaatgtgtgtcgagtctccctagcttgggaaagagccatggc
tccattacaacaaatggatcatcttccaatccaggcatcatcacgaaagggattgtgatc
cagccaggacatccagttccccataacaacgtcccaaggaactctgatagctttgctcca
caggcattgagaaatagacctattgcctgcaaacctccgaccacgcagcctgctgacagt
cccccccagccaaccacttccagtgcagagaagaatctgcttgacttcagcctgatttcc
cttgaagaggaggggctagtgagggagtggctgaatgggaagcaaggtgtccaggtacca
tcactgcacaccaggttgccttatttgccaccttttctgtgcaacttaaaaaccctctcg
aagctacttctgcagaaagcagctctagaagagcaagcggcatgtcttctgccttctgat
gccggtcaggatgagggcactagggttgatttacacgctatcagagaactggtgcagcag
aaactcggcgataaccctgcttacctcctactgaaagccagattcctagcagcctttacg
ctcccagctgtactagcaactctgtctcctccaaaagtggcaacaactctgtcagccagc
aggaagcaatatgaagagagtgacgaagaggagtggcagagtgagaaggaagtgtctgag
gaagagagttctgggaatgaattcacaggtgtacggtcagattgggcagctggtgacgag
cctggagacaaagatgctgatttactaaatcagggcatgggagctgaagagaatgctgca
cagtctgtcctggactcctgcactgatgtggctgatgccagtgctcctcaaatcaggaga
agtgcccgcttcaggaaaaggaggagggtgtga
DBGET
integrated database retrieval system
