Nipponia nippon (crested ibis): 104023274 Help Entry 104023274         CDS       T05756                                  Symbol SETX Name (RefSeq) probable helicase senataxin   KO K10706   ATP-dependent RNA/DNA helicase, senataxin [EC:5.6.2.5 5.6.2.3] Organism nni  Nipponia nippon (crested ibis) Brite KEGG Orthology (KO) [BR:nni00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:nni03021]     104023274 (SETX) Enzymes [BR:nni01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.3  DNA 5'-3' helicase      104023274 (SETX)     5.6.2.5  RNA 5'-3' helicase      104023274 (SETX) Transcription machinery [BR:nni03021]  Eukaryotic type   RNA polymerase II system    Other transcription-related factors     Transcription termination factor      104023274 (SETX) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  AAA_11 AAA_12 AAA_19 AAA_30 Viral_helicase1 UvrD-helicase AAA_22 SLFN-g3_helicase AAA_16 nSTAND3 DUF4164 Motif Other DBs NCBI-GeneID:  104023274 NCBI-ProteinID:  XP_009475355 LinkDB All DBs Position Unknown AA seq 2828 aa AA seqDB search MSTCRWCTPSGSDTTEFLKSYASKRLSPEDLEGSNDDLCYCLECVVEYHKAREKLPRLHE VLWQLETSRLVAHIEKSMREEVGEDDELFIVDENGETQLSGFVGPDFENNLRVPLLEILK YPYLLLHEKVSELCVEVLCRMEQSHNSFQVFEKYPGIYLFLVHPNEVIRRWAILTARNLG KVDRDDYYDLQEVLTCLFKVIELGLFDNPDIYSSSMIENGKLVLLPSHLYDTANYKNYWL GICMLLTVLEEQAMDSLLLGPDKQNDFMQSILHTMEKEAADDSTDPFWPALHCFMVILDQ LGSKVWGQLIDPVQAFQTIINSVSYNNEIKNIRSSFKRTKSEPESDYNDDMVTCSQIVYN YNTEKPQKDTGWKTAICPDYCPNMYEDMQTLANVLQSDIGRDMRVHHSTFLWFIPFVQSL MDLKDLGVAYIVEVIHYLCLEIKDILNERIHQCDKISEFFLLVLVSIVELHRNKKCLHLL WVSSQEWVEAVVRCAKLPAVAFTRCTEKASGHSARGSSAVSSQASNSVQHACVQLIRSLL REGYQIGQHALCKQYLDKLNLLLRGNLSLGWQLNNQETQELRLCLRQVIKSIKDRALNSP VPGGNNANSTTLPTVSVKEEKSARGDGCKMSLRGRDDHCSPFAVISKEGGDEDCQENPFS KRKSAWEEECRDASKSSRSWTSIEGFLMNVKKEANDLAAEKYVCPQNSLVTKVCGKVQEN RNNDLVVGKYDMDKQCFNPNAQLADFGRGGELENKCETGPITPMCLAAQTHVGSPECVSS SDVKESSMSSGSSSKFKIDVHRLTNLKNKVQKTEWPSKVSQSAKPCDLKNCSIATSASKA EVEQPKFCTGYLCTSKDCHKHQGANTVCENEISVDTPPSRSCESTQEKSVNSAFQSGLVP PKQVSKETPLDCSSSLKNEPGMQENEDDDILFSGISDTLLKKVSTEEKSSSLLKSVFKTD TDMQTSDREQPNLNDLVKYDCKGQISKTFCMDKTSANGRVPSSSENKRDIFKPASQIGPL SMKCESSDRLFKFSEYFKRENNLVGKKESDFVKTVSEDNTLTDSQVDRELSKLSLAAYAK SVNFSFDSSQESSVHHNVCDIKRKVKGAVRSSNDGQSTKSPCDADCLDNKVVIIIDSSDE EQGVADKEETKKMNENVCLEEQPSTSSCVSDSGTKLESKMPSSALSLEDCESQCFEFETE VDVYSVWQDTQAYRMEATQEYNQDHVSAPVDSSNTDALPNDHTNEWGYDEDYTSADTMEE INLIEKQMETVSHQKEADTTKEVTNSTLQESISKDNAKDQLENFADKGTVAKNFTLDLKL TEPGASTSNISLASKLALKKNSASPRKKIAKSKVARTIPRSPKKPLVLKTAQNKKLLQST SKSSQPGRSMPAVVPPRKVRQCPVPASTVEKLGLKKAPRKAFELSQRSLDSLAQLRSYGA AAGRVGQNSAQRQKIKLIAPQSLSIKHNKKLLACQDLQFLRQTRPKRSVRVKNLAGSSES RDKKVSKVDAKPMKQNPKSFELASVEGPVENQREKKREETVCPSASERKFESLSVEEETC VSKMPSSSDSNRRSEDNSMMVPPVPMDSSLSSAALVGDDKGEHSGRGCVVQPESEKTTSK EDGCKPNENSEDDDYLFLTQLDPVDMELCSEEESVRDTTTASKNPEEMDTAESLQQNESS NIVKCKYKDCMETVEKPGEYCSKHSATGSETDHLFAKPSLLPPFKIRKPSTTKIFSSASS SRNAAFSKDLEDVKKLQPASKSKANAAKPVIVRPPNAKAVPTGNQTCKPPSFSNVPQPRI SSNILQSQNGQNNNASNISRRPAQEAYYSSFLGAQQRDHSIFVNEVLKWTYEMFANSSQF GPPRNLLQSVVGPVPVQFQGYNDYFNTFFPLMMLNAFETLAQEWIENQRVREKSYCFYLQ NFCADLNTADFTAHFRESDLARQLHPKEDDLIFLVVQKKKDNFREESEMENHIVSHVGLV TRFSRASGQKEQHTLCHLSVQTRGNLSFFINKQVKCVVVGSLVTTHRTFKGLLLLSRSPL AKPIINPSYNDFCPRDLPVASESAAFDMNEYNEGQKRAIETAYAMLKQHPGLPKICLIHG PPGTGKSKTIVGLLSRVLRENTRNQKASQKTNSKIKPNRFLVCAPSNAAVDELMKKIIIA FKEKCQNRQEPLGNCGDIKLVRLGAEKAINSEVRGFSLDKQVEHRMKRKPADCDQDIQKK KQALDQQLDMLSRQRAMHRCEKKEVARQHQMLDDEIGRLSKERQQLASQLKEVRVRSQKV QADIILESDIICCTLSTSGGSLLESAFWRQGLDPFSCVIVDEAGQSCEVETLIPLIHRCN KLVLVGDPRQLPPTVKSVKAQDYGYDQSLMARLHRHLEEQVKKNVLRSLPVVQLTVQYRM HPDICLFPSNYVYGRTLKTDKATEENRCSSEWPFQPYLIFDVGDGREERDNDSFSNPQEV KLVMELIRTIKEKRKDLGLRRIGIITPYSAQKKKIQEQLDRVFKNNSPGEVDTVDAFQGR EKDCIIVTCVRANTTKGSIGFLASLQRLNVTITRARFSLFILGRLKTLMENKDWNELIQD AQKRGAIIKTSEKSYRKDAVKILKLKPPVQPPVKAGTKTSLLQAGSSSSKRGELANPREA SSARELAAGAGHAAPQGSRGPQQPQRAQAADSRRGSASAPVDAAVLPDQEKPRDPRLASM ASRTETKGKEQASKDSNRSGQGNPGSTSQQGLNVSAAARDQISRTETFQKPQQTMGQCDM SSASSYAARHEADWRASVSKSSSEARSEGGQSHSSKWNKGCRVLTRRTSEESPQSTGSNS AKRRKTFH NT seq 8487 nt NT seq  +upstreamnt  +downstreamnt atgagcacatgccgatggtgtacgcctagtggttctgacaccactgagttcctgaagagc tatgcttctaaacggttgtccccggaagatcttgaaggatccaacgatgatctctgttac tgcctggagtgtgtggttgaataccacaaagcaagggaaaaattgccaaggctgcatgag gtcttgtggcagttggaaacctcccgtcttgtggcccacattgagaaatccatgcgagaa gaggttggggaagatgatgagttgtttatagtggatgaaaatggagagacacagctgtct ggttttgtgggcccggattttgagaacaacctgcgagtgccccttctagaaatactgaaa tacccatatctgctgctgcacgagaaagtcagtgagctgtgtgtagaagtgctctgtaga atggaacaaagtcacaactcctttcaggtctttgagaaatatccaggaatttatctcttt ttggtacacccgaatgaagtgattcgtcgatgggccatcctaacagcaaggaatttaggg aaggttgacagggatgattactatgacttacaggaagtgctgacttgcttgttcaaagtt attgagttggggctttttgacaatccagatatttacagctcttcaatgattgaaaacggt aaactcgtccttctgccatctcatttatatgatactgccaactacaagaactattggcta gggatttgtatgttgctaacagtgctggaagaacaagctatggactccttgctactgggc ccagacaaacaaaacgatttcatgcagtctattcttcacaccatggaaaaagaagcagct gatgattctactgaccccttctggccagcgctgcattgtttcatggttattttggatcag ctcggatctaaagtatggggtcagcttattgatcctgtccaagcctttcaaaccattatc aacagtgtgagctacaacaatgaaataaaaaacatacgcagtagctttaagaggacaaaa tctgaaccggagtcagactacaatgatgacatggttacttgcagtcaaattgtgtataat tataacacagaaaagcctcaaaaggatactggatggaagactgccatttgtccagactac tgccccaacatgtatgaagatatgcaaacactggctaatgtgcttcagtctgatattggc agagatatgcgtgtccatcacagcacgtttctgtggttcatcccttttgttcagtcgctt atggatctcaaggacttgggtgtagcatatatagtagaggtcattcactacctctgcttg gaaatcaaagatattcttaatgaaagaatccatcagtgtgacaaaatctctgaatttttt ctcctggtcttggtgtccattgttgaactacacagaaataaaaagtgcctgcatttgctg tgggttagctcccaagaatgggtggaagcggtggtgagatgtgctaagcttccagctgta gcttttacacggtgcactgagaaagcatctggacattctgcaagaggctcatcggcagta tcttcacaagcttctaactctgtgcagcatgcctgtgtgcagttgatacgcagccttctt agagaaggctatcaaattgggcagcatgctctttgtaagcaatacctagacaaactcaat cttcttctgcggggaaatctgtctttaggttggcagctgaacaaccaggaaacccaagaa ttacgactgtgtttgaggcaagttataaaaagtataaaggacagagcactgaatagccct gtgcctggaggaaacaatgcaaactctacaactttgcccaccgtttctgtaaaggaagag aagagtgcacgtggtgatggatgcaagatgagtctacgtggcagagatgaccattgttca ccatttgctgtcatatcaaaggaaggcggagatgaagattgtcaagagaaccctttctct aaaagaaagagtgcctgggaagaggaatgtagagatgcatctaaaagttcaagatcttgg acatccatagaaggcttcttgatgaatgttaaaaaggaagctaatgacttggcagctgag aaatatgtctgcccacagaactctttggtaacaaaagtatgtgggaaagttcaggaaaat aggaacaatgatcttgtggtagggaaatatgacatggataagcagtgctttaatccaaat gcccagcttgcagatttcggaagaggcggagagttggaaaacaaatgtgaaaccggaccc ataacaccaatgtgtctggctgctcaaactcatgttggttctccagaatgtgtttccagc tcagatgtaaaggaaagcagtatgtcttccggttcctcttcaaagtttaaaatagatgtg cacagactcacaaatttgaaaaacaaggtacagaaaactgaatggccctcaaaagtatca cagtcagcgaagccatgtgacttgaaaaactgcagtatagcaacaagtgcttcaaaagca gaggtagagcaacctaagttttgcactggctatctgtgtacaagcaaagattgtcataaa catcagggagcaaatactgtgtgtgaaaacgaaatctctgttgatactccaccttctagg agttgtgaaagtacccaggagaaaagtgtcaacagtgcttttcaatccggactggtcccc cctaaacaagtatcaaaagaaacaccactagattgctctagctccttgaaaaatgaacct ggtatgcaggaaaatgaagatgatgatattctgttttcagggattagtgacaccttactg aaaaaagtatctactgaagaaaaatcaagttcattgttgaagtctgtgtttaagacagac actgacatgcaaacttcagaccgggaacagcctaatttaaatgacttggttaaatatgac tgtaaaggtcaaatttcaaagacattttgtatggataaaacttcagcaaacggtcgtgtt ccatctagctctgaaaacaagagggatatattcaagcctgcttctcagatcgggccactg tcaatgaagtgtgaatcaagtgacaggttgttcaaattttcagaatatttcaagagagaa aacaatttggtggggaagaaagagtcggattttgtgaagacggtttctgaagataatact ttaacagactcccaggttgatagagaactcagtaaattgtctttagctgcatatgccaaa agtgtcaatttttcctttgattcaagccaagaaagctcagtacatcataatgtatgtgat attaaaaggaaagtgaaaggtgctgtaagatcttccaatgatggccaaagtaccaagtct ccctgtgatgcagattgtcttgacaataaagttgtcataattatagactcttctgatgaa gaacaaggtgtggctgacaaggaggaaacaaaaaaaatgaatgaaaatgtgtgtctggaa gagcagccttcaacttccagctgcgtttctgatagtggtaccaaactagagtcaaagatg ccaagctctgccttgtcactggaagactgtgagtctcagtgctttgaatttgaaacagaa gttgatgtctattcggtttggcaagatactcaagcgtatagaatggaagcaactcaagag tataatcaagatcatgtttcagcaccggttgatagtagtaatacagatgccttaccgaat gatcacacaaatgaatggggttatgatgaggattacacaagtgctgataccatggaagaa ataaacttgatagaaaagcaaatggaaactgtttctcatcagaaagaagctgatactaca aaagaagtaactaattcaacattgcaagaatctattagtaaggacaatgcaaaagatcaa ctggagaattttgcagacaaaggtactgttgctaaaaacttcaccctggacttaaaactg actgaacccggagcatccacatctaacatctcattagcttcaaagttggcccttaagaaa aatagtgcaagcccacggaagaagatagcaaaatctaaagtagcaagaactattccaaga agtcctaaaaagcctcttgttcttaaaacagcacaaaataaaaaactacttcaaagtacg tcaaaaagttctcagcctggcaggtcaatgcctgctgtggttcctccaagaaaagttcgg cagtgtcctgtaccagcatcaactgtagaaaaacttggtctgaagaaggcaccccgcaaa gcatttgaattatcccagcgctctttagacagtctagctcaattgcgcagctatggtgcg gctgcagggagagttgggcagaactctgcacagagacagaagattaaactaattgcgcct cagagtttgtctataaaacataataaaaaattgctagcctgccaagaccttcagttttta aggcagacaaggcccaaaagaagtgtcagagtgaaaaatcttgcaggaagttctgagagt agagacaaaaaagttagcaaagtggatgcaaaacctatgaaacaaaaccctaaaagtttt gaactggcatctgttgaaggacctgttgaaaaccaaagagagaaaaaaagggaggagact gtttgtccctctgccagtgagagaaaatttgaaagcctctctgtggaggaggagacctgt gtctctaaaatgcctagttcttcagactcgaacagaagatcagaggataacagtatgatg gttcctcctgtacctatggattcaagtctctcttctgctgcacttgttggagatgataaa ggtgaacattcaggaagaggttgcgttgtccagcctgagtctgagaagacaacttcaaaa gaagatgggtgtaaaccaaatgaaaacagtgaagatgatgattatctgtttttaactcag ttagatcctgtggatatggaattatgttccgaggaggaaagtgttcgcgatactactacg gctagtaaaaacccagaggaaatggatactgctgaaagccttcagcagaatgaatcttca aatattgtgaaatgtaagtacaaagactgtatggaaacagtggaaaaaccaggagagtac tgtagtaagcattcagccaccggctcagaaacagatcacttgtttgccaaaccttctctc ctgccaccttttaaaataagaaagccttccactaccaaaattttcagttcggcaagttct tcacggaatgcagccttcagcaaggatcttgaagatgttaaaaagctacagccagcttca aaaagcaaagcgaatgcagcgaaaccagtgatagtcaggccaccgaatgcaaaggctgta ccaacagggaatcaaacatgcaagcctccgagtttcagtaatgtacctcaaccccgtatt tctagtaacattctccagtcacaaaacggacagaacaacaatgcttcaaatatttccaga aggcctgcccaagaagcatattattcttcctttcttggcgctcagcagcgtgatcatagt atttttgttaatgaagtcctgaagtggacttacgaaatgtttgcaaactccagccagttc ggacctccaaggaatctcctgcagtctgtagtaggccctgttcctgtccaatttcaggga tacaatgactattttaatacatttttccccttgatgatgctaaatgcctttgaaacactg gcacaagagtggatagaaaatcagagagtaagagaaaagagttactgcttctacttacag aacttctgtgctgacttgaatacagcagattttacagctcattttcgagaaagtgatttg gcaaggcagcttcatccaaaggaggatgacttgatctttttggtggtccaaaagaaaaaa gacaactttagggaagaaagtgagatggagaaccatatagtgagtcacgttggtcttgtg acacgattttctcgtgcgtctggacaaaaggagcagcatactctctgtcatctttctgtg caaactcgaggcaatttgtcattcttcataaataagcaagtgaagtgtgtggtggttggc tccctggtgaccacacaccgaacattcaaaggcctactactattgagcaggagtcccctg gctaaacccatcataaatccaagttacaatgacttctgtcccagagatttgcctgtagct tcagaaagtgctgcattcgatatgaacgagtacaatgaaggtcaaaagagagccattgag acagcttatgccatgttaaagcaacatccagggcttcccaagatctgcctcatccatgga ccacctggaacagggaaatcaaaaactattgttggacttctgtctcgtgttttgagagaa aacactaggaatcagaaagcaagtcaaaaaacaaattccaagatcaagccaaaccgtttt ctagtttgtgcaccatcaaatgctgctgttgatgaactcatgaaaaagatcatcattgca tttaaggaaaaatgccaaaacagacaggagcctttgggaaattgtggtgatatcaaatta gtgcgacttggtgctgaaaaagcaatcaacagtgaagtccggggatttagcctggataag caagttgaacacagaatgaaacgaaagccagctgactgtgaccaggatattcagaagaag aagcaagctctggatcaacagctggacatgctgtctcgtcagcgtgccatgcacagatgt gagaagaaggaggtagcaagacaacatcaaatgttagatgatgaaattggcagactttca aaggagagacaacagcttgcttctcagctaaaggaggttcgggtgcgctctcagaaagta caggcggatatcatcttggagtccgacatcatctgctgcacactgagcacaagtggagga agtctgctggaatctgctttttggcggcaaggacttgatcctttcagctgtgtgattgtg gatgaggcaggacagtcctgtgaggttgaaacactgattccactgatccatcgctgtaat aagcttgtccttgttggagatcccagacagctccctcctactgtaaaatcagtaaaagct caggactatggctacgatcagtccctgatggcacgcctgcacagacacctggaggagcaa gtgaagaagaatgttttacgaagcctgccagttgtgcagctgactgtgcagtaccggatg cacccagacatctgcctcttcccatccaattatgtttatggcaggactctaaagactgac aaagcaacagaagagaacagatgttcttcagagtggccgttccagccctaccttattttt gatgtaggagacggtcgtgaggagcgagataatgactcttttagtaatcctcaggaagtg aagctggtgatggaattaattagaacaattaaagagaaaaggaaggatctgggtcttcgt cgcattggaataattaccccttacagtgcacagaaaaagaaaattcaagaacaattggac agagtgtttaagaataacagcccaggagaagtggacacagtggatgcattccagggacga gagaaagactgcatcatagtgacgtgcgtccgggcaaacaccactaaagggtcaattggg ttcctggcaagtcttcagcgtctgaacgttacaattacccgagcccgattcagcctcttt atccttggaagactgaaaacgctcatggaaaataaggactggaatgagttgattcaggat gctcagaaaagaggtgccattatcaagacatcagaaaaaagctacaggaaagatgcggtt aagattttgaagctgaagccaccggtacagcccccagtcaaagcagggacaaagacatct ctgttgcaggctggctcttccagtagcaagaggggtgagcttgcaaatccaagggaggcc agcagcgcacgggaactcgctgctggtgctggccatgcagcgccacaaggaagcagaggg ccccagcagccacagcgggctcaggctgcagactccaggagaggcagtgcctccgcaccc gtggatgctgcagtgcttcctgatcaagagaaaccgcgtgatccgaggctggcaagtatg gctagtagaactgaaacaaaagggaaggagcaggcctcaaaagacagcaatcggtcaggc cagggcaatccaggatcaacgtcacagcaaggcctcaatgtgtccgcagcggccagggat cagatttccagaacagaaacttttcagaagccccagcaaacaatgggacagtgcgacatg tcttccgcatcgtcttacgcagctcggcacgaggctgactggagagcttctgtatcgaaa agcagttcagaagcccgcagcgaaggaggtcaaagtcatagcagtaagtggaacaaaggc tgtcgtgttttaacgaggagaacatcagaggaatcgccacagagcacaggatcaaacagt gccaagcgaagaaagacctttcactga

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