Nipponia nippon (crested ibis): 104023277
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Entry
104023277 CDS
T05756
Symbol
DDX31
Name
(RefSeq) probable ATP-dependent RNA helicase DDX31
KO
K14806
ATP-dependent RNA helicase DDX31/DBP7 [EC:
5.6.2.7
]
Organism
nni
Nipponia nippon (crested ibis)
Brite
KEGG Orthology (KO) [BR:
nni00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
nni01009
]
104023277 (DDX31)
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
nni03009
]
104023277 (DDX31)
Enzymes [BR:
nni01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
104023277 (DDX31)
Protein phosphatases and associated proteins [BR:
nni01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
104023277 (DDX31)
Ribosome biogenesis [BR:
nni03009
]
Eukaryotic type
Pre-60S particles
Helicases
104023277 (DDX31)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
ERCC3_RAD25_C
Helicase_C_2
FF
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
104023277
NCBI-ProteinID:
XP_009475358
LinkDB
All DBs
Position
Unknown
AA seq
729 aa
AA seq
DB search
MAAVGRLCALLTVFAAFASLGAGCRSCGERLQASARLEQSNALKRKLQSPHGNPPLKRKR
KPSISTFKKRATEADIREKGSSSQQSLPKKQLTDNRNESQKSKPFIKTSSLFRNNPDIPE
IHRKVVQQVQENVFTTDSFSQLDLHPHLISTINTVLKISSMTSVQKQTIPVLLQGKDALV
RSQTGSGKTLAYGIPLVQSLQGMESKIQRSDGPYALILVPTRELALQSFDTMQKLLKPFA
WIVPGVLMGGEKRKSEKARLRKGINILISTPGRLVDHIKSTECIHFRRTQWLIIDEADRI
LDLGFEKDVAVILNALNAERETRQNVLLSATLTEGVTRLADISLNDPISISIADEIQKAL
KPASQMDRQASSSSDCMEQENFAVPEKLKQYVMMVPSKLRLVTLAAFILEKCKFEKHHKM
IIFFSSCEQVEFHYELLQKVLSGGLESEQPEYLSLSSAHLRFLRLHGNMEQEERTEVFQE
FLKSKTGILLCTDVAARGLDLPQVTWIVQYNAPASPAEYIHRIGRTARIGCHGNSLLVLA
PSEAEYVSLLASHKINVSEIKMEKVLSSLMKDDRFKLHRPGSKKSCGTDPQEVRERATVL
QTKFENYIHSSEGTVRWAKKALQSFLCAYTTYPRNLKHIFHIKSLHLGHVAKSFGLRDAP
QNLTALPTAGSKKKTKPRPKRSDLLKKTHGKHRLAEILRSEYSSGMDTGVSKVKKKKKRR
KPGNQQIPT
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atggccgctgtgggacggctctgcgctctcctcacggtgttcgcggcttttgcctcgttg
ggggctggctgccgaagctgcggggaacgcttacaggcctctgctcgtttggagcagtct
aacgctctgaaaagaaagctccagtcaccacatggaaacccacctttgaaacgtaaacgt
aagccatcaataagcaccttcaagaaacgtgctacagaagctgacatcagggaaaaggga
agttcatcacaacaatctcttcctaagaagcagttgactgacaaccgaaatgaaagccag
aaaagcaaacctttcattaagacgtccagcctgtttagaaacaaccctgatatcccagaa
attcacagaaaagtagtacaacaagtgcaagaaaatgttttcactacggattcttttagc
cagttggacctccatccgcatctgatatccacaataaacactgtcctgaagatcagtagc
atgaccagtgttcagaagcagacaattcctgtgctcctgcaaggcaaagatgctctagtg
agatctcagactgggtcaggtaaaactcttgcctatgggattccgcttgtgcagtctttg
caaggaatggaatccaaaatacagcgcagtgatgggccttatgcactcatattagtccca
acaagagagcttgcacttcagagttttgatacaatgcagaaactacttaagccatttgcc
tggattgtgcctggagtgctaatggggggagaaaagagaaaatcggaaaaagccagatta
cgtaaagggataaatattctcatttcaactcctggtcgcctggttgatcacatcaagtcc
acagaatgtatacatttccgtcgcactcagtggctgattattgatgaagcagacaggatc
ctggaccttggctttgagaaggatgtagctgtgatactcaatgctttaaatgctgagaga
gagacacgtcagaatgtcctgctctcagccaccctcacagaaggagtaacacggctggcc
gatatcagtttgaacgatcccatcagcatttccatagcagatgaaatccagaaggcactc
aaaccagcatcacaaatggatagacaagccagtagttcatcagactgcatggagcaggaa
aactttgctgttccggagaagctcaagcagtatgtcatgatggtccccagcaaattgagg
cttgtcacgttagcagcttttatccttgagaaatgcaagtttgaaaaacaccacaagatg
atcatctttttctccagctgtgaacaagtggaattccactatgagctcctccaaaaggtc
ctttcaggagggctagagtcagaacaacccgaatatttatctctctcctctgcacactta
cggtttctacgactgcacggcaacatggaacaggaagaaagaacagaggtcttccaggag
ttcctaaaatccaagactggcatcttgctttgcactgatgttgcagcacgtggactagac
ctgcctcaagttacatggatcgtacagtataacgctccggcttcacctgcggaatacatc
caccggatcgggaggacggctcgcattggctgtcacgggaacagcctgcttgtcctggcg
ccttcagaggcagaatatgtcagcttgctggcttctcacaagattaatgtttcagagata
aagatggagaaggtattatccagtctgatgaaagatgatcgcttcaagttgcacagacca
ggaagcaagaaatcctgtggcacggaccctcaggaagtccgggagcgggccacggtcttg
cagacaaaatttgaaaattacattcactccagcgaggggactgtccggtgggcaaagaaa
gcattgcagtctttcctttgtgcctataccacatatcccaggaacctcaagcacatcttc
cacatcaaatctctccatctgggtcacgtggccaagagctttggcctgagagatgcccct
cagaacctgactgctcttccaactgcaggctcaaagaagaaaaccaaaccaagaccaaaa
aggtctgaccttctcaagaagacccacggcaaacatcgccttgctgagatcttgcgatct
gaatattccagtgggatggacactggtgtatccaaggtcaagaagaagaaaaaacggaga
aaacctggcaaccagcagattccaacataa
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