Nipponia nippon (crested ibis): 104023483
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Entry
104023483 CDS
T05756
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1-like
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
nni
Nipponia nippon (crested ibis)
Pathway
nni03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
nni00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
104023483
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nni03019
]
104023483
Messenger RNA biogenesis [BR:
nni03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
104023483
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fip1
TSX
Motif
Other DBs
NCBI-GeneID:
104023483
NCBI-ProteinID:
XP_009475592
LinkDB
All DBs
Position
Unknown
AA seq
556 aa
AA seq
DB search
MSSSVLISCGGNGTSGGVSASVGTSNDTTGKQEDGPIPGHAESSHPLQDAPQENRPVSNE
DREMSQHALPSGEDDEDDSDSDSDDDDVKVTIGNIKTGAPSYMGTPMNLNLKTGRGYGAS
ASAKLQPKGIDLDAAGNINGLPVIEVDLDSFEDKPWRKPGADLSDYFNYGFNEETWKAYC
EKQRRLQLGLDPAPPISTENKITVQQGRTGNAEKEVENNIIKTEFKTDFLALVGGRMKAG
PPPNRKLGGTIDVIGGQAGTIRRVEGRRRDKHASEENPIQVLGDHGSKPQPPQQPQQPSQ
PQQPPQQQPFAPPAGPPPPPLAGPPPPHFLHPPPPVTSVPPPLHPPGLPPPGPIPGLFPP
PLAPPPALLIPTLDGQPASYNNRQPPPFGYNSADSGFISYPPISTSHTPWVTTVDKGTSS
SSSSHWEYSGSRRERERERERERERERDRDRTPTTSEYNNDDERYRYYSRERSYDFERDY
RRSRDRSREREDRHRERRHRDKEESSKHKSSRRKQHESEEGESHRRHKHKKNKRSKEEKE
ASEDGAQEGEEQDAKE
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atgtccagcagcgtgctgatcagctgcggagggaatggcactagcggtggggtttctgct
tctgttgggacttcaaatgacaccactggtaagcaagaagatggaccaattcctggacat
gcagaatcttctcatcctttgcaagatgctcctcaggagaaccggcctgtcagcaacgaa
gaccgagagatgtcgcaacatgccctcccaagtggtgaagatgatgaagacgacagcgat
agcgacagtgatgatgatgatgtgaaagttactattggcaacattaaaacgggagcaccg
tcgtacatgggaactcctatgaatctaaacttaaaaacgggtagaggctatggagcatct
gcttcagccaagttgcagcccaaaggtattgacttggatgccgcagggaatataaatgga
ttgcctgttatagaagtggatttagattcatttgaagacaaaccgtggaggaaaccaggt
gctgatctttctgattactttaattatggattcaatgaagaaacgtggaaagcttactgt
gaaaagcagcgacggcttcagctgggactggatcctgctcctcccatcagcactgagaat
aagatcacggttcagcaaggaagaaccggaaatgctgaaaaagaagtggaaaacaacatc
atcaaaacagaattcaaaacagacttcttggctctggtgggaggacgcatgaaggctggg
cctcctcctaacaggaagctgggtgggacaattgatgtgatcggtggccaggcaggcaca
attaggagagtagaaggaagacgtcgggataagcacgcctctgaggaaaacccaattcag
gtccttggagaccacggaagtaagccacaacccccacagcagccccagcagccatcacag
ccccaacagccacctcagcaacagccgtttgcaccaccagcaggcccaccgcctcccccg
ctcgctgggccacctccaccacacttcctccaccctcctccaccagttacttctgttcca
cctcccctgcatcctccaggtctgccaccacccggtcctattccagggctgttcccgcct
cccctggcaccgccaccagctctcctcattcccaccttggacggccagccagccagctac
aataacaggcagcctcctccgtttggctacaactctgcagattcaggtttcatcagctac
ccacccatctccacatcccacacgccctgggtgacgacggtggacaaaggcacgagcagt
tccagcagcagccattgggaatactcgggctcgaggcgcgagagggaacgggagcgcgag
cgggaaagggaaagggagagagaccgagaccgcactccgaccaccagtgaatacaacaat
gatgatgaacgataccgctactacagccgagagcgcagctacgactttgagcgtgactac
cgccggagtcgagatcgcagcagggagcgagaggatcgtcaccgggagcgccggcacaga
gacaaagaggagagcagcaagcataagtcttcaagacgcaaacaacacgagagcgaggag
ggggagagtcaccggcgccacaagcacaaaaagaacaagcgtagcaaggaggagaaggag
gccagcgaagacggcgcccaggagggagaggagcaggatgccaaggagtaa
DBGET
integrated database retrieval system
