Nipponia nippon (crested ibis): 104023499
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Entry
104023499 CDS
T05756
Symbol
CIITA
Name
(RefSeq) MHC class II transactivator
KO
K08060
MHC class II transactivator [EC:
2.7.11.1
]
Organism
nni
Nipponia nippon (crested ibis)
Pathway
nni05164
Influenza A
Brite
KEGG Orthology (KO) [BR:
nni00001
]
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
104023499 (CIITA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
nni01001
]
104023499 (CIITA)
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
nni04054
]
104023499 (CIITA)
Enzymes [BR:
nni01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
104023499 (CIITA)
Protein kinases [BR:
nni01001
]
Serine/threonine kinases: Other
TAF1 family
104023499 (CIITA)
Pattern recognition receptors [BR:
nni04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
104023499 (CIITA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NACHT
NLRC4_HD2
Silic_transp
NB-ARC
Motif
Other DBs
NCBI-GeneID:
104023499
NCBI-ProteinID:
XP_009475605
LinkDB
All DBs
Position
Unknown
AA seq
1071 aa
AA seq
DB search
MNLFKEILPRLRKILSAAAAFDDHALLNLMLKEGVISKEYHQALLHEKDRGDLARKISLT
FVEKWDLYLNTLFPLCCLSLYGSKPQNMIDNEPTGSKYISGSKRQIMDSAFVSENGYLDL
LHSDIDPLHLYTLLDPKSSGNEEGDFSADPEVDACNYEQLNNMDFLCTMENGENGDELYL
CSNTIEAYARIAELAEYVLKDQQEKQVEDTFAGNLILEEMAAENTEKFTDIKMQKCHKRT
FLGSAESCSDASEPKYKKIVEVPAVSAENGSFLAMPLNSHPASSTSLTNQHMSFSVPATN
ALERSFIIPGSSAPLIPECLPVGMKGSQENIGFADPPQQILNFVLGNGTSDVIIYPVLTS
SMETLMSASFPVSLCGLELFKEVRVPIIPSEEPFKRPKPVEAFCTSLMDYFRDVCKSVAM
EREVPLDHLFIEGTLVQSQTETKTGKNSVKALEKELVTCSLQGKENAALKRSQIFQISGG
KETKVIVVLGRMGKSILAQKICQDWSNGEFSQFEFVFWFDCKQISLPEKQYSLKDLLLEF
FVKPQKGSKEIFEYILQNPAKVLLIFDGFEGLHDHENLPRCSARQPEKDLCSIKELLSGL
IQKKILNGCTLLLTARPKDKVYQYVSKVDKTIEIVGFSPQQRELYITKYFEGLSYCDNAL
KLIKECEYLFSHCYNPIMCRFVCFVCETVLEMGDKNLPSTLTTVFLKLVQQKITPMQTDV
AAMQNQENLATLARIAWYLGEKHQSAMKSYLPSKEVKEFALKYGFFLPFAFPRHSDSEEE
EFGSTFSDFVIQNFLGALHLMLAEEIKDKSLTKYLSFPSKKKKPYNWLDLVPRFLAGLLF
LQDDPYFCSLSNKDVKQSTKKQKTLLKYIRKLQINELCPERLLELLHCIYETQSIYLLQH
VALRLKPDLSFLDVVLTPPDVHVLHSILKTSRKEFSLDLRNSSIDMQGLKDLVGLKNVAS
FRASLSNTVRLWKSLEQTKDYELLRASTEKFVLDPFKAKTMKDVSDLSDLVEMQEKMINC
VQDASGCSSYEIPAIKNLRKLEFALGPACGLQGFLKLVEILAAFPSLQHLE
NT seq
3216 nt
NT seq
+upstream
nt +downstream
nt
atgaatctctttaaggagatcctgcctagactaaggaagattctttcagctgctgcagct
tttgatgaccatgcgttgcttaacctcatgctgaaagaaggtgtgatatccaaggagtac
catcaagccttgctccacgaaaaagacagaggtgaccttgcaaggaagatctctctgaca
tttgtggaaaaatgggacctgtacttgaacactttgtttcccctctgttgtttaagcctc
tatggcagtaagcctcaaaacatgatagataatgagccaacaggaagcaagtacatttct
ggcagcaagagacaaatcatggattcagcatttgtgtctgaaaatggctatcttgatttg
ctgcacagtgatatcgatcccttgcatctgtatactctcctcgatcctaagtcatctgga
aacgaagaaggtgacttctctgcagatcctgaagttgatgcctgcaactatgagcagttg
aataacatggatttcctgtgtacgatggaaaatggggaaaatggggatgaattgtatctc
tgttccaacaccatagaagcttatgctagaatagctgaattagcagaatatgtgctcaaa
gatcagcaggagaagcaggtggaagacacttttgcagggaaccttattttggaggaaatg
gctgctgaaaacaccgagaaatttactgacataaagatgcagaaatgtcacaaacgaacc
ttcttaggctctgcagagagttgctctgatgcttcagaacccaaatacaagaaaattgtg
gaagtccctgcagtgtctgcagagaatggcagtttcttagccatgcctctcaacagccat
ccagctagctccacctcactaactaaccagcacatgtccttttctgttcctgctaccaat
gcgttggaaagaagtttcataattcctggatcttcagcacctttgattccagagtgtcta
cctgtcggcatgaaagggagccaagagaatataggctttgcagatcctcctcagcagata
cttaactttgttcttggaaatggcacatctgatgttataatatatccagtgctgacttcg
tccatggaaacattgatgtccgcaagttttccagttagtttatgtggtttagaattgttc
aaagaagtccgagttcccataattccttctgaagaacctttcaaaagaccaaagccagtg
gaagctttctgtacgtcacttatggattatttccgagatgtgtgcaaatctgtggccatg
gagcgtgaagtacctcttgatcacctgtttattgaggggacacttgttcaaagccaaact
gaaaccaagactgggaagaatagtgtcaaagcacttgaaaaggagctggtaacttgcagt
ctgcaagggaaggaaaacgcagcccttaaaagaagccaaatatttcaaatctcaggaggt
aaagagactaaagtgattgtggtactgggaagaatgggcaaaagcattcttgctcagaag
atctgccaggactggtccaatggagagttttctcaatttgaatttgtattttggtttgac
tgcaaacaaataagcttgcctgagaagcaatacagcctgaaggatctacttcttgaattt
tttgtaaaacctcaaaagggaagcaaagagatctttgagtatatattgcaaaatcctgct
aaagtccttctgatttttgatggttttgaagggctgcatgatcacgagaatcttcctcgt
tgttcagccaggcagcctgaaaaagacttgtgcagtataaaagagctgctttcaggactc
atccaaaaaaagatactcaatggttgcactttattacttacagcaagaccaaaagacaag
gtgtaccagtatgtgtccaaagtggataagactattgaaatagtaggattttcccctcag
caaagagaattgtacataaccaaatacttcgaaggattatcctactgtgataatgcactg
aaattaatcaaagagtgtgagtacttgttcagtcattgttacaaccctattatgtgtaga
tttgtttgttttgtctgtgagactgtacttgaaatgggagacaaaaaccttccttcaact
cttactacagtcttcctgaaacttgttcagcaaaagataacacctatgcaaacagatgta
gcagccatgcaaaaccaggagaatctggctacactagcccgtatagcctggtatcttgga
gaaaagcaccaaagtgccatgaaaagttatcttccttctaaggaagttaaagagtttgct
ctgaaatacggatttttcctgccgtttgcattccccagacattcagatagtgaagaagag
gaatttgggagcacattctccgattttgtcattcagaatttcttgggtgcacttcacctt
atgttagcagaagagatcaaggataaaagtctaacaaagtacctgtcttttccatccaag
aagaaaaaaccttataactggttagacttagtgcctcgatttttggctggattgttgttc
ctccaggatgacccctacttctgctccctttcaaataaggatgtaaaacaatcaaccaag
aagcagaaaacactcttgaaatatattagaaagctgcagataaatgagctctgtccggag
aggttactcgagcttttacattgtatttatgaaacgcaaagcatttatcttttgcagcat
gtggccttaaggctcaagccagacctgtcttttctggacgtagttcttacaccgcctgat
gtccatgtactgcattctattttaaaaacatcaagaaaagagttttccttggatttgcga
aacagcagcattgacatgcaagggctaaaagacttggttggcctaaagaacgtggcatcg
ttcagggcctccctcagcaatacagtcaggctctggaaatctttagaacaaacaaaagac
tatgaactgctgagagcatcaacagagaaatttgttcttgatccctttaaggcaaagaca
atgaaggacgtcagtgacctttcagaccttgtcgagatgcaggagaagatgatcaattgt
gtgcaagatgcatctggttgcagcagctatgaaattcctgccatcaaaaacctcagaaaa
ctagaatttgcgctgggtccagcatgtggcctgcagggattcctaaaactcgtggaaatt
cttgcagcatttccatcacttcagcatttagagtga
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integrated database retrieval system
