Nipponia nippon (crested ibis): 104023616
Help
Entry
104023616 CDS
T05756
Symbol
COL4A6
Name
(RefSeq) collagen alpha-6(IV) chain
KO
K06237
collagen type IV alpha
Organism
nni
Nipponia nippon (crested ibis)
Pathway
nni04382
Cornified envelope formation
nni04510
Focal adhesion
nni04512
ECM-receptor interaction
nni04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
nni00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
104023616 (COL4A6)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
104023616 (COL4A6)
09142 Cell motility
04820 Cytoskeleton in muscle cells
104023616 (COL4A6)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
104023616 (COL4A6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nni04147
]
104023616 (COL4A6)
00536 Glycosaminoglycan binding proteins [BR:
nni00536
]
104023616 (COL4A6)
Exosome [BR:
nni04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
104023616 (COL4A6)
Glycosaminoglycan binding proteins [BR:
nni00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
104023616 (COL4A6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
104023616
NCBI-ProteinID:
XP_009475739
LinkDB
All DBs
Position
Unknown
AA seq
1613 aa
AA seq
DB search
MCKDHRVKFVLVVLTDVEGGKKSYSGPCGGRDCSAGCKCFPEKGARGRPGPIGLQGPIGA
PGFTGPEGLPGAKGERGAVGPPGPAGQKGDKGPMGVPGFQGINGIPGHPGQSGPRGLPGL
DGCNGTTGSPGVSGSDGFPGPPGLPGHPGPKGLKGEPVFVQGSLKGMKGENGLPGLDGIS
GPKGFPGPIGSAGPIGLPGLQGPMGPPGPPGPKGNMGLGFQGEKGEKGDVGLPGPPGPPP
STGILEFMGFPKGKQGEKGEPGPQGFPGDKGLPGMPGFGGVGEKGEKGVPGLPGGRGHPG
VPGYPGLDGVEGMKGELGDIGPPGPPIVIDREGVVISGAPGDPGNPGIPGPPGDEGISGL
PGLPGAPGFPGLERDGMGPGGSPGVPGVKGEVGEPGRATIGLPGTPGRDGLPGLPGAPGL
PGSPRPSFAPDTILDRRPGAPGEPGQRGLPGALGPKGYKGEAGDCACDGGVTRAGLKGTS
GPPGPSGSPGVPGIKGIGGDPGTVGAPGLRGPPALTGQQGLPGLKGEKGDSSYATGRGAR
GDRGATAPRGPSGIPGTPGRDGLPGLPGPPGPPGDGGLGFPGEKGLPGLPGSKGHRGETG
SPGVGYPGPSGVRGPPGDPGMDGFPGQAGLPGPPGITLPCIVPGAYGPPGTPGFPGLPGP
KGSKGFPGIPGQPGLHGSKGQPGSPGIIGLQGEPGFPGPRGEQGSQGLPGLDGTDGLPGK
MGALGLAGTKGAPGDVFGAESGALGERGRPGLPGDKGLTGDLGFPGPKGLDGRPGLLGIK
GEQGNPGYSGVPGLRGPPGPGGPFGIKGKPGPLGSAGLAGAPGLPGVKGVTGDVGPQGPA
GMKGFPGLDGAPGSPGERGFLGPPGPFGQDGRPGFSGPKGEKGSSGLLGFPGMPGMPGIP
GVNGFKGTPGTAGGKGSPGVVGLQGQKGDRGDVGPPGLPVLGPPEQALQFKGDKGDPGLA
GLGGFPGPRGDKGIPGSRGQPGLPGAIGLASKERGLHGDPGFPGPPGQPGLPGQKGERGR
EGLKGEPGYPGNTGVNGLKGGPGDLGQEGPAGIPGNAGLRGIPGPPGPPGQPGSVGFPGA
HGTAGPKGFHGFPGLNGLNGLPGTKGSPGTPGLSETGLKGPAGLPGPKGEEGSPGLGRGA
LGFPGPKGSSGDMGPPGPVGLPGLPGTPGVSLPSDIRGRPGDAGHPGTDGSSGLPGPPGP
RGPPGPASDQGDTGNPGFPGVPGLRGIKGDVGPTGPVGLPGASGFKGIRGEPGLMGMPGK
DGAPGDPGYPGLKGEMGRRGLPGRQGAPGITPQPEEITAPAGLPGLPGIDGVPGFDGDPG
FQGPAGKTGTKGLPGRSGLKGRDGLPGSPGVAGDPGPSGAPGPQGFEGVAGKPGSLGLPG
MPGRSVGVGYTLVKHSQSEQIPPCPIGMNKLWDGYSLLYVEGQEKAHNQDLGFAGSCLPR
FSTMPFIYCNINEVCYYASRNDKSYWLSTTAPIPMMPVDSAQIPQYISRCSVCEAPSQAV
AVHSQDITIPQCPLGWRSLWIGYSFLMHTAAGAEGGGQSLVSPGSCLEDFRATPFIECNG
ARGTCHYFANKYSFWLTTVEQSQQFVSAPPSETLKAGQLRTRVSRCQVCMKNL
NT seq
4842 nt
NT seq
+upstream
nt +downstream
nt
atgtgcaaggatcacagagttaaatttgtcttggtagttctcactgatgtagagggtgga
aagaagtcttacagtgggccatgcgggggccgcgattgcagcgctggatgcaaatgcttt
ccagagaagggtgcgcggggtcgaccaggaccgattgggcttcaaggaccgataggtgca
cctggatttactgggccagaaggtttgccaggagcaaagggtgagagaggagcagtgggc
ccccctggaccagctggacagaaaggtgacaagggcccaatgggagttccaggatttcaa
ggcatcaatgggatcccaggtcaccctgggcaatctggacctagaggtctgcctggcctc
gatggctgcaatggtaccactgggagtcctggcgtttctggatcagatggatttcctggc
ccacctgggctgcctggtcatcctggcccaaaaggccttaaaggagaacctgtttttgtt
caaggcagtcttaaaggaatgaagggagaaaatggtcttcctggattggatggaatttct
ggcccaaaaggttttccaggtccaataggttctgcaggccctataggattgccaggtttg
cagggtccaatgggtccccctgggccaccaggtccaaaaggtaacatgggattaggcttt
caaggagagaaaggagaaaagggcgatgtagggctgcctggccctccaggtcccccacca
tccactggaatactggaattcatgggatttccaaaagggaaacaaggagaaaagggtgag
ccaggccctcaaggattccctggagacaaaggattgcctggcatgccgggcttcggaggt
gttggagaaaaaggagaaaaaggtgtgcctggcttaccaggtggcaggggtcatccaggt
gttccaggctatccaggactggatggagtcgaaggcatgaagggtgaattaggtgacatc
ggtcccccaggccctcctatcgttattgacagggaaggtgtagtcatttcaggtgccccg
ggtgaccctggaaacccaggaatacctggtcctccaggagatgaagggatcagtggttta
ccaggccttccaggagctccagggtttccaggactagagagagatggaatgggccctgga
gggtctccaggtgttccaggtgtgaagggtgaagtgggagaaccaggaagagcaacgatt
ggattgccaggcactcccggcagggatggtttaccgggtctgccaggagcaccaggattg
cctggttcaccacgcccgtcattcgccccagacacgatcctggatagaaggcctggggcc
ccaggggagcctggacaaagagggctgccaggagctttgggtccaaaggggtacaaagga
gaggcaggtgattgtgcttgtgatggaggagttacaagagctggtctaaaaggcacctca
ggtccaccaggtccatcgggaagccctggtgtgcctgggattaagggcattggtggagac
ccaggcactgtgggcgcgccaggactgcgaggccctccggctttgactggtcagcaaggt
cttccaggccttaagggagagaaaggggattcatcctatgcaacaggcagaggtgctcgt
ggggaccgtggtgcaacagcacccagaggaccttcaggcatcccaggaacccctggcagg
gacggacttccaggcttgccaggcccaccaggccccccaggtgatggtgggctaggtttc
ccaggtgaaaaaggactgccaggattacctggctccaaaggccatcgtggagaaactggt
tctcctggcgttggatatccaggtcctagtggagttcgtgggccaccaggtgacccagga
atggatgggtttccaggacaagcaggtcttccaggccctccaggtatcaccttgccctgc
atagttcctggagcatatgggcccccagggactcccggctttccaggactgccaggtccc
aaaggcagcaaaggctttcctggcattccaggccaacctggattgcacgggtcaaaagga
cagccagggtctccaggaataataggcttgcaaggggaacctggcttccctggacctcga
ggagagcaagggtcacaaggacttccaggactggatggaacagacggtttgcctgggaaa
atgggtgctttgggcttagctggaacgaaaggagctcctggagatgtatttggtgctgag
agtggagcactaggagagcgtggccgacctggactcccaggtgataaggggcttacaggt
gatcttggatttccaggaccaaaagggttagatggaagaccaggcctcctcggtattaaa
ggagaacagggtaatccaggatattcgggtgtccctggattgcggggacctcctggtcct
ggaggtccttttggcattaagggaaaaccaggacccttggggtcagctggccttgcagga
gcaccaggacttcctggagtcaaaggcgtgactggggatgtaggtccacaaggccctgct
ggtatgaaaggcttcccaggtcttgatggtgctccaggatctcctggtgaaagaggattc
ttagggccgcctgggccttttggtcaagatggacgtccaggtttctctggtccaaaaggc
gagaaagggtcttctggcctgcttggtttccctggcatgccaggcatgcctggtatccct
ggggtgaacgggtttaaaggaactcctggcacagctggaggaaaagggagccctggagtt
gtgggactccaaggtcaaaaaggcgacagaggtgatgtaggtccacctggtcttcctgtt
cttgggcctccagaacaggcactgcaattcaaaggagacaaaggagatcctggattagct
gggcttggaggattccctggacctagaggtgataaaggaatcccaggaagccgtggacag
cctggtctccctggtgcgattgggttagcaagcaaagagagaggtcttcatggtgaccca
ggcttccctggtccacctggacaacctgggctgccaggacagaagggagagagagggaga
gaaggactcaagggtgaaccaggctacccaggaaacactggggtgaatggactcaaaggc
ggcccaggagatcttggccaagaaggaccagcagggatccctggaaatgctgggctgcga
ggaatccctgggccaccaggacctccagggcagccaggatctgtcggattccctggagct
catggaacagcaggacctaaagggtttcatggatttccgggtttaaatggtctgaatggc
ttgccaggcacaaaagggtctcctggaacaccaggcctgagtgaaactggactgaaaggc
cctgcaggtctcccaggtccgaagggtgaagaaggttctccaggcttgggtagaggagct
ctaggattccctggaccaaaaggctcatcaggagacatgggtccccctggtcctgtggga
ctgcctggcttgccaggaacacctggggtttctcttccttctgatatacgtgggagacct
ggggatgctggccatccaggaacagatgggagttcaggtcttccaggccctccaggaccc
cgagggccccctggcccagcttctgaccaaggtgacacaggcaatccaggcttccctggt
gttcctggtttgcgaggcattaagggtgacgtgggacccactggtccagttggactccct
ggagcatctggattcaaaggtataagaggggagcctggccttatggggatgccaggtaaa
gatggggctccgggggatcctggttaccctgggctgaaaggtgaaatgggccgtcgaggt
ctccctggccgacaaggggctccaggtataaccccgcagccagaagaaatcacagcccct
gcaggcttacctggtctgccaggaattgatggcgtccctggctttgatggagatcctgga
ttccaggggccggctggaaaaacaggtacaaaaggtctgccaggaagatctggtttgaaa
ggacgtgatggtttacctggatcacctggcgtagctggggatccaggaccttcaggtgcc
ccaggaccacaaggatttgaaggtgttgctggaaagccgggctcacttggtttgccggga
atgcctggtcggagcgtgggcgttggatacactttggtgaagcacagtcagtcagagcaa
atcccaccttgtcccatagggatgaataagctctgggatggctacagcttattgtacgtg
gaggggcaggaaaaggcacacaaccaggatcttggttttgctggctcatgtttgcctcgc
ttcagcaccatgccgtttatttactgcaacatcaatgaagtgtgctactacgccagccga
aatgacaagtcctactggctctccaccactgctcctatccccatgatgcccgtggacagt
gctcagatcccgcagtacatcagtcgttgctccgtatgtgaagcaccttcccaggctgtg
gctgtgcacagccaggacatcaccatcccgcagtgtccccttggttggcgcagcctatgg
ataggatactccttccttatgcataccgcggctggtgcagaaggcggaggtcagtccctt
gtctcgcctggttcttgcctggaggatttccgtgctactccattcattgagtgcaacggc
gctaggggaacatgccattactttgcaaacaaatacagcttctggctgacgaccgttgaa
cagtcgcagcagtttgtcagtgctcctccctcggaaactctgaaagccggacagcttcga
acgagggtcagccgttgccaagtgtgcatgaagaacttgtag
DBGET
integrated database retrieval system
