Nipponia nippon (crested ibis): 104023627 Help Entry 104023627         CDS       T05756                                  Symbol ATG4A Name (RefSeq) cysteine protease ATG4A   KO K08342   cysteine protease ATG4 [EC:3.4.22.-] Organism nni  Nipponia nippon (crested ibis) Pathway nni04136   Autophagy - other nni04140   Autophagy - animal Brite KEGG Orthology (KO) [BR:nni00001]  09140 Cellular Processes   09141 Transport and catabolism    04140 Autophagy - animal     104023627 (ATG4A)    04136 Autophagy - other     104023627 (ATG4A)  09180 Brite Hierarchies   09181 Protein families: metabolism    01002 Peptidases and inhibitors [BR:nni01002]     104023627 (ATG4A)   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:nni04131]     104023627 (ATG4A)    03029 Mitochondrial biogenesis [BR:nni03029]     104023627 (ATG4A) Peptidases and inhibitors [BR:nni01002]  Cysteine peptidases   Family C54: Aut2 peptidase family    104023627 (ATG4A) Membrane trafficking [BR:nni04131]  Autophagy   Autophagosome formation proteins    Atg8 conjugation proteins     104023627 (ATG4A) Mitochondrial biogenesis [BR:nni03029]  Mitochondrial quality control factors   Mitophagy factors    Autophagy-related proteins     104023627 (ATG4A) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Peptidase_C54 ATG4_LIR Motif Other DBs NCBI-GeneID:  104023627 NCBI-ProteinID:  XP_009475751 LinkDB All DBs Position Unknown AA seq 395 aa AA seqDB search MVLSRYENQITILSDYLEEFPETDEPVWILGRQHHLSTDKSKLLLDISARLWFTYRRKFS PIGGTGPSSDAGWGCMLRCGQMMLAQALICRHLGRDWQWEKHKKQPEEYHRILRCFLDRK DCCYSIHQMAQMGVGEGKSIGEWFGPNTVAQVLKKLALFDEWNSLAVYVSMDNTVVIEDI KKMCWSPAASSSAAHSSAHLHRSALGRSKNAAGFCTGWKPLLLIIPLRLGINHINPVYID AFKECFKMPQSLGALGGKPNNAYYFIGFLGNELIYLDPHTTQTFVDSEENGTVDDQSFHC QQAPHRMKIMNLDPSVALGFFCKEECDFDNWCSLVQKEILKQQSLRMFELVQKHPPHWPP FIPPTKPEVTTTGAELIESTDKLFELEEEFEILSV NT seq 1188 nt NT seq  +upstreamnt  +downstreamnt atggttttatctaggtatgaaaaccagatcactattttgtcagactacttagaagaattt ccagaaaccgatgagccagtgtggattctaggaaggcaacaccacttaagcacagacaaa tctaagttattgttggatataagtgctcgtctctggtttacgtatagaagaaagttttcg cctattggaggcactggtccttcgtctgacgctggctggggatgtatgctgcggtgtggg cagatgatgctggcacaagcactgatctgcagacatttaggaagagattggcaatgggaa aaacacaaaaaacaaccagaagaatatcacagaatcttacggtgctttctagataggaaa gattgctgttattccatccaccaaatggcgcagatgggtgttggagaggggaaatcaatt ggagaatggtttggaccaaatacagttgctcaagtcctgaagaagcttgctttatttgat gaatggaattcattagcagtttatgtatctatggacaatacagtggtcattgaagacatc aagaaaatgtgctggtcccccgccgcgagcagcagcgcggcccacagcagcgcgcatttg cacaggagtgctctgggccgaagtaagaacgcagcaggattctgcacaggctggaagccc ctcttgcttattatacctctacggctagggataaatcacataaatccagtatatattgac gcgtttaaagaatgctttaagatgccacagtctttgggagcactaggagggaaaccaaat aatgcctattatttcataggatttttaggcaatgagctgatctatttggaccctcacacc actcaaacttttgtagattcggaagaaaatggcacagtcgatgaccagagcttccactgc cagcaagccccacacagaatgaagatcatgaatttggacccttcagtagctttaggcttc ttctgcaaagaagaatgtgattttgataactggtgtagtcttgtacaaaaggagattctg aaacagcagagcctgcggatgttcgagctggtccagaagcatccgccccactggccgcct ttcatacctccgacaaagccagaagtgacgaccacgggcgcagaactcattgaatctact gacaagctatttgaattggaagaagaatttgaaatcctgagcgtatga

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