Nocardia nova: NONO_c03940
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Entry
NONO_c03940 CDS
T03032
Symbol
topA
Name
(GenBank) DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
nno
Nocardia nova
Brite
KEGG Orthology (KO) [BR:
nno00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nno03032
]
NONO_c03940 (topA)
03400 DNA repair and recombination proteins [BR:
nno03400
]
NONO_c03940 (topA)
Enzymes [BR:
nno01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
NONO_c03940 (topA)
DNA replication proteins [BR:
nno03032
]
Prokaryotic type
DNA Topoisomerases
NONO_c03940 (topA)
DNA repair and recombination proteins [BR:
nno03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
NONO_c03940 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
HC2
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
AHH15208
UniProt:
W5T898
LinkDB
All DBs
Position
441103..444033
Genome browser
AA seq
976 aa
AA seq
DB search
MATRDRGASPTPDAGSDGPDASVPAGRGRLVRRLVIVESPTKARKIAPYLGRGYTVEASV
GHIRDLPRGAADVPAKYKGQSWARLGVDVDHDFEPIYVVNPDKKAKVSELKTLLRDADEL
YLATDPDREGEAIAWHLLETLKPKIPVRRMVFHEITEPAIRAAAADTRELDNDLVDAQET
RRILDRLYGYEVSPVLWKKVMPRLSAGRVQSVATRIVVQRERERIAFRSAEYWDIAAKFD
AGGGESDQANPRIFGARLVTVDGSRVAGGRDFGSDGQLKTRSGVTVLDEAAARRLAAALQ
NADFQVSSVESKPYTRRPYAPFMTSTLQQEAARKLRFGSERTMRVAQRLYENGYITYMRT
DSTTLSESAITAARAQATQLYGPEFVHPTPRQYNRKVKNAQEAHEAIRPAGDTFATPGQL
HARLDQDEFRLYELIWQRTVASQMADARGTTLTVRITGRAGTGEECVFSASGRTITFAGF
LKAYVESVDEDSGSQSDDAESRLPALTEGQNVSATELTPDGHTTNPPPRYNEASLIKALE
ELGIGRPSTYASIIKTILDRGYVYKRGSALVPSWVAFAVVGLLEEYFGRLVDFDFTAAME
DDLDAIAGGREQRGNWLSSFYFGGEHGAEGSVARSGGLKRMVGEQLDDIDAREVNSIKMF
ADDEGRDIVVRVGRFGPYLERMVRNPDDPDGDPISQRANLPDDLPPDELTPAIAEKLFAT
PQEGRELGVDPETNHRIVAKEGRFGPYVTEILPEPEPDPDAKKGAKKPAGPKPRTGSLLK
SMDLSTITLDDALKLLSLPRVVGKDPESGDEITAQNGRYGPYLKKGTDSRSLTTEDQIFT
VTLEEALKIYSEPKRRGRQAASAAPLRELGKDSATDKPMVIKDGRFGPYVTDGETNASLR
KGDEVESITDERASELLADRRARGPVKKTAKKAAKKAPAKKTAAKKTTTAKKTTAKKTTA
KKATAKKAATRPEADQ
NT seq
2931 nt
NT seq
+upstream
nt +downstream
nt
gtggcaacacgagaccgcggtgcatcaccgacccccgatgcgggctccgacgggcccgat
gcgtcggtcccggccgggcgggggcgtctcgtacgccgtctcgtcatcgtcgagtcgccg
accaaggcccgcaagatcgcgccctatctgggccgcggctatacggtcgaggcgtcggtg
ggacatatccgggatctgccacgcggggccgccgacgtaccggccaaatacaaaggacag
tcctgggcgcggctgggtgtcgacgtcgatcacgacttcgagccgatctacgtcgtcaat
ccggacaagaaggccaaggtctcggagctcaagaccctgctccgcgatgccgacgagctg
tatctggccaccgaccccgaccgcgagggcgaggccatcgcgtggcatctgctggaaacg
ctgaagcccaagatcccggtccggcggatggtgttccacgagatcaccgaaccggccatc
cgggcggccgcggccgacacccgcgagctggacaacgacctggtcgatgcccaggagacc
cggcgcatcctggaccgtctctacggttacgaggtcagccccgtcctgtggaagaaggtc
atgccgcggttgtcggcgggccgggtgcagtcggtggcgacccgcatcgtcgtccagcgc
gagcgggagcggatcgccttccggtcggcggagtactgggatatcgcggcgaaattcgac
gcgggcggcggtgaatcggatcaggccaatccgcggatcttcggcgcgcgactggtcacg
gtcgacggttcccgcgtcgcgggcgggcgcgatttcggatccgacgggcagctcaagacc
cgttccggggtcaccgtcctggacgaggccgccgcacgacggctggccgcggcgttgcag
aacgcggatttccaggtctcctcggtcgaatccaagccctacacccgcaggccctacgcg
ccgttcatgacgtcgacgctgcagcaggaggccgcccgcaagctgcggttcggctccgag
cgcacgatgcgcgtggcgcagcggttgtacgagaacggctacatcacctacatgcgtacc
gactccaccacgctgtcggagtcggcgatcaccgcggcacgggcgcaggcgacccagctg
tacggtccggaattcgtgcacccgacgccgcgccagtacaaccgcaaggtcaagaacgcg
caggaggcacacgaggcgattcgccccgccggtgacaccttcgccaccccggggcagttg
cacgcccggctcgatcaggacgagttccggctctacgagctgatctggcagcgcaccgtc
gcctcgcagatggccgacgcccgcggtaccaccctcaccgtccgcatcaccggccgggcc
ggaacgggtgaggaatgtgtgttctcggcctccggtcgcacgatcaccttcgcgggtttc
ctcaaggcctatgtggagagcgtcgacgaggattccggcagtcagtccgacgacgccgaa
tcccggctgcccgccctgaccgaagggcagaacgtcagtgcgaccgaactcacaccggac
gggcacaccaccaatccgccgccgcgctacaacgaggcctcgctgatcaaggctctggaa
gagctggggatcgggcgtccgtcgacctacgcgtcgatcatcaagacgatcctcgatcgc
ggatatgtctacaagcgcggcagtgcgctggtgccgtcgtgggtggcattcgcggtggtc
ggtctgctggaggagtatttcggccgtctggtcgacttcgacttcaccgccgccatggag
gacgatctcgacgccatcgccggtggccgggaacaacgcgggaactggttgtccagcttc
tatttcggtggtgaacacggcgccgaggggtcggtggcgcggtcgggtggtctcaagcgg
atggtcggcgagcaactcgacgacatcgatgcccgcgaggtcaactcgatcaagatgttc
gccgacgacgagggccgcgacatcgtggtccgggtcgggcgcttcggtccgtatctggag
cggatggtgcgcaatccggatgatccggacggcgatccgatctcccagcgcgcgaatctg
cccgatgatctgccgccggacgaactgaccccggcgatcgccgagaagctgttcgcgacg
cctcaggagggacgcgaactcggcgtcgatcccgagaccaatcatcggatcgtcgccaag
gaaggccgtttcggcccgtacgtcaccgaaatcctgcccgagcccgagccggatcccgat
gcgaagaagggcgccaagaagccggccgggcccaagccccggacgggatcgctgctcaaa
tcgatggatctgtccacgatcaccctcgacgatgcgctgaaactgctgtcgctgccgcgg
gtggtcggtaaggatcccgagtccggtgacgagatcaccgcccagaacggccgctacggt
ccgtatctgaagaagggcacggattcgcggtcgctcaccaccgaggaccagatcttcacg
gtcaccctcgaagaggcgttgaagatctactccgagcccaaacgccgtggcaggcaggcc
gccagtgcggcaccgctgcgggaactgggcaaggactcggccaccgacaagccgatggtg
atcaaggacggccggttcggaccgtacgtcaccgacggtgagaccaatgccagcctgcgc
aagggcgacgaggtggagtcgatcaccgacgagcgcgcttccgaactgctcgccgatcgc
cgggcgcggggcccggtgaagaagacggccaagaaggccgcgaagaaggcgcccgccaag
aagaccgccgcgaagaagaccaccacggccaagaagacgaccgccaagaaaacaacggcg
aagaaggccaccgccaagaaggcggcgacgcggcccgaggccgatcagtag
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