Nocardia nova: NONO_c32630
Help
Entry
NONO_c32630 CDS
T03032
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V beta chain
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
nno
Nocardia nova
Pathway
nno03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nno00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
NONO_c32630 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nno03400
]
NONO_c32630 (recB)
Enzymes [BR:
nno01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
NONO_c32630 (recB)
DNA repair and recombination proteins [BR:
nno03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NONO_c32630 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
PDDEXK_1
UvrD_C_2
AAA_30
PhoH
DUF7127
Motif
Other DBs
NCBI-ProteinID:
AHH18050
UniProt:
W5TFC1
LinkDB
All DBs
Position
3551482..3554922
Genome browser
AA seq
1146 aa
AA seq
DB search
MTDELFPTGDVRTVDDRPRPRRRARPTGESAAGRFATGGEAGPRRDSSEFDLCGELPTGT
TILEASAGTGKTYAIVGLAVRFVAEGVVDISQLLLVTFSRAATQELRERTRDRFVAVAAA
LAEPATARSADDELIVHLAAADDAEVLRRRARLVAALSDFDAGTISTTHGFCQRMLDELG
IAGEHDPRVRLVEGIEDLVTTVAEDLYLARYARGGAPMPIRQATALAKAAVADRRARLVP
GDELGDHPAAEAAAFAAAVRTEVERRKRLSGLRDYDDQLVLLHDVLADPAHGERACRRIR
ERFPVTLVDEFQDTDPLQWDILRRVFHTHTTLVLVGDPKQAIYAFRGAEVLSYLDAVALA
GARRELDINRRSDAGLLTALHHVFGGAALGHPEITVPPVRAVRPHTRLSGPGDSPVPLRL
RLFPRQGAGALNGSGFPAVGRQRERVADDVAADIVRTLESGLRVDGAALGPGDIAVLVRK
RTQIDAVRAALDRAGVASVLAGGASVFGTRSATDWLWVLRALEQPHRGDRVRLAATTPLL
GYSAAEIDSGGADLVGQIGTRLREAARLFARSGFAAVFDRLGAQALPAPRLLSVLGGERR
LTDLRHIAQLLDEVASRESLGLTALTRWLADRVRDPESGAVSGRSRRLDRDAAAVQIATV
HASKGLEFPIVYLPFAWDSAKIPDPPTLLFHDGPDRVLDVGGPEAPGYAEHKRRCDAEEA
GEELRLLYVALTRAKCRVVAWWAPTYGTASAPLHRMILGRDPGSAEVPARSEVAADPIAL
RRLQDWAAAAGPGLIDIEPIRAPEQLRLRTERGRDGDVHLAAARFERTVDHEWRRTSYSA
LTASAHEQAPAALDTAETVSGGTDEPLSPAPELETDPGAEFAGAAPSLMNGLPYGAEFGT
LVHGVLELVDTDAPDLAAEVRARCAHAVAELMADIDPDELARALVAVLRTSVDPVALADI
RSRDRLEELEFELPLAGGDDPVARRVSVRRIADLLRAHLPADDPFAEYAAAVELLDDIAL
KGFLTGSIDAVLRTAGPRFVVVDYKTNRLGSGDLTVAHYTRDRMAQEMARSHYPLQALLY
SAALHRYLRWRMPDYDPARHLGGVRYLFVRGMIGPDTPPGHGVFDWDPPVDLVVALSDLL
AGGRTR
NT seq
3441 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgacgaactgttcccgaccggcgatgtgcgcaccgtcgacgaccgcccgcggcca
cgtcggcgcgcacgacccacgggcgaatccgccgccggacggttcgccaccggcggggaa
gcgggcccccggcgcgattcgtccgaattcgatctgtgcggcgaattgcccaccggcaca
accatcctggaggccagcgccggaaccgggaagacctatgccatcgtcgggctggcggtg
cgtttcgtcgccgagggtgtcgtggacatctcccagctgctgctggtgaccttcagccgg
gccgcgacccaggaactgcgcgagcgcacccgcgaccgtttcgtcgcggtcgccgccgca
ctcgccgaaccggccaccgcccggtcggccgacgacgagctgatcgtccatctggccgcg
gccgacgacgccgaggtgctgcggcggcgcgcccggctggtggcagcactgtcggatttc
gacgccggaaccatttccacgactcacgggttctgccagcgcatgctcgacgaactcggc
atcgcgggcgagcacgatccgcgggtgcggctggtggagggaatcgaggacctggtgacc
acggtcgccgaggatctgtatctggcccgctacgcccgcggcggcgcgccgatgccgatc
cggcaggccacggcactggcgaaagcggcggtcgccgatcgtcgcgcgcgactggtgccc
ggcgacgaactcggcgatcacccggcggccgaagcggcggccttcgcggccgcggtccgc
acggaagtggaacggcgcaaacggctttcgggcctgcgcgactacgacgaccaactggtc
ctgctgcacgacgtcctcgccgatcccgcccacggcgagcgagcctgccgccgcatccgc
gagcgcttcccggtgaccctggtggacgaattccaggacaccgatccgctgcagtgggac
atcctgcggcgggtgttccacacccacaccaccctcgtcctggtcggcgatcccaaacag
gcgatctacgccttccggggcgccgaggtgctgagctatctggacgcggtcgcgctggcg
ggtgcgcgccgcgaactcgacatcaaccggcgcagcgatgccggactgctgacggcgctg
caccacgtattcggcggtgcggcgctgggacatccggagatcaccgtgccgccggtgcgc
gcggtgcgcccgcacacccggttgagcggaccgggtgactcgccggttccgttgcggctc
aggttgtttccgcgtcagggcgcgggtgcgctcaacggcagcgggtttcccgcggtgggg
cgccagcgggaacgggtcgccgacgatgtggccgccgacatcgtgcgcaccctcgaatcc
ggtctgcgcgtcgacggcgcggcgctcgggcccggtgatatcgcggtcctggtgcgcaaa
cgcacccagatcgacgcggtgcgcgccgcgctggaccgggccggggtggcgtcggtgctg
gccggtggtgcgagtgtgttcggcacccgcagcgccaccgactggctgtgggtgctgcgg
gcgctggaacaaccacatcgcggcgaccgggtgcggctggcggcgaccactccgctgctg
ggctactcggccgccgagatcgactccggcggtgcggatctggtcgggcagatcggcacc
cggctgcgcgaggccgcccggttgttcgcgcgctcgggattcgcggcggtcttcgaccgg
ctcggtgcgcaggcgctcccggcgccgcgcctgctgagcgttctcggcggtgagcggcgg
ctgaccgatctgcgtcatatcgcgcagctgctcgacgaggtggcgagccgggaatcgctg
gggctcaccgcgctgacccgctggctggccgaccgggtccgggatccggagtcgggcgcg
gtctccgggcgcagccgccgcctcgaccgcgatgccgccgcggtgcagatcgcgaccgtc
cacgccagcaagggactggaattcccgatcgtctacctgccgttcgcctgggacagcgcg
aagattccggacccgccgaccctgctgttccacgacggccccgaccgggtgctcgatgtg
ggcggccccgaggcgcccggatacgccgaacacaaacgccgatgcgacgccgaggaggcc
ggtgaggaactgcggctgctgtatgtcgcgctgacccgggcgaaatgccgggtggtcgcc
tggtgggcccccacctacggcaccgcgtccgccccgctgcaccggatgatcctgggccgc
gacccgggcagcgcggaggtgcccgcgcgcagcgaggtcgccgccgatccgatcgcgttg
cgccggctacaggactgggccgccgcggccggtcccggactgatcgacatcgaaccgatc
cgtgcccccgaacaactgcggctgcgcaccgagcgtggccgcgacggcgacgtacacttg
gccgccgcgcgattcgagcgcaccgtggaccacgaatggcgccgcacctcctattcggcg
ctgacggcctcggcgcacgagcaggcgcccgccgcactcgacaccgcggaaacggtgtcc
ggcggtaccgacgaacctctttctcccgcaccggaactcgagaccgatccgggcgcggaa
ttcgccggagccgcaccgtcgctgatgaacggcctgccctacggcgccgaattcggcacc
ctcgtccacggcgtcctcgaactggtcgacaccgacgcgccggatctcgccgcggaggtg
cgcgcgcgatgcgcgcacgcggtcgcggaactgatggccgacatcgatcccgacgaactc
gcccgcgcgctggtcgcggtgctgcgcacctcggtggacccggtcgcgctcgccgacatc
cggtcccgcgaccggctcgaggagctggaattcgaactgccgctcgcgggcggtgacgac
ccggtggcgcgacgggtgagcgtgcgccgtatcgccgatctgctgcgcgcccatctgccc
gccgacgatccgttcgccgagtacgccgcggcggtggaactgctcgacgacatcgcgctg
aagggcttcctcaccggcagtatcgacgccgtattgcgcacggccgggccacgtttcgtg
gtcgtggactacaagaccaaccggctgggttccggtgatctgaccgtcgcccattacacc
cgcgaccggatggcgcaggagatggcgcgctcgcactacccgctgcaggcgctgttgtat
tccgccgcgctgcaccggtatctgcgctggcggatgcccgattacgatccggcccggcat
ctgggcggggtgcgctacctgttcgtgcgcggcatgatcggcccggacacaccgcccggt
cacggcgtcttcgactgggatccgccggtggacctggtggtggcgctgtcggatctgctg
gcgggcgggaggacccgatga
DBGET
integrated database retrieval system
