Nocardia nova: NONO_c38950
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Entry
NONO_c38950 CDS
T03032
Name
(GenBank) RNA polymerase sigma factor
KO
K03090
RNA polymerase sigma-B factor
Organism
nno
Nocardia nova
Brite
KEGG Orthology (KO) [BR:
nno00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nno03021
]
NONO_c38950
Transcription machinery [BR:
nno03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
NONO_c38950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
HTH_23
MarR_2
HTH_Tnp_ISL3
Sigma70_ECF
Motif
Other DBs
NCBI-ProteinID:
AHH18679
UniProt:
W5THN6
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All DBs
Position
4292922..4293758
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AA seq
278 aa
AA seq
DB search
MTQEPMIDARPRARHGPNSYDNIEPWFDKLAGYAPEDPERDAVRSEIVRLCLPLADHIAR
RFTGRGENYDDLHQVARLGLVLAVDRYDVGRGTSFLSFAVPTMMGEVRRHFRDVTWATRV
PRRLKELRTLLGPATDRLAQRLGHMPTAAELSSELDIDVIEVGQAIAAGNAYRSDSLDEM
ITADENEIYPVDARLGAEEPCYELTENAMAVRPLIEKLPPEERRILIMRFFESRTQTQIA
RTMNISQMQVSRILARTLHRLHDEALCEEPEPVGAART
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atgacacaggaaccgatgatcgacgccaggccccgcgcccggcacggaccgaacagctac
gacaacatcgaaccctggttcgacaagctggccggatacgcccccgaagaccccgaacgc
gacgccgtgcgcagcgaaatcgtgcggctgtgtcttccgctggccgaccacatcgcccgc
cgcttcaccggccgcggagagaactacgacgatctgcaccaggtggcccggctgggcctg
gtgctggcggtggaccgctacgacgtcggccgcggcacctcgttcctgtcgttcgcggtt
cccaccatgatgggcgaggtacgccgtcacttccgcgacgtcacctgggccacgcgcgtg
ccgcgcaggctcaaggagttgcgcacactgctgggaccggcgaccgatcgcctcgcccag
cgactgggccacatgcccaccgccgccgaactgtcctcggaactcgacatcgatgtcatc
gaggtcggccaggcgatcgccgccggtaacgcctaccgttcggactcgctcgacgagatg
atcacagccgacgagaacgagatctacccggtcgacgcccggctcggcgccgaggaaccc
tgctacgaactcaccgagaacgcgatggcggtccggccgctcatcgagaaattgccaccg
gaggaacgccgcatcctcatcatgcggttcttcgagtcgcgcacgcagacgcagatcgcg
cgcacgatgaacatctctcagatgcaggtgtcgcgcatcctggcgcgcaccctgcaccgc
ctccacgacgaggcactgtgcgaggaaccggaaccggtcggcgccgcccggacctga
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