Nocardia nova: NONO_c59050
Help
Entry
NONO_c59050 CDS
T03032
Name
(GenBank) hypothetical protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
nno
Nocardia nova
Brite
KEGG Orthology (KO) [BR:
nno00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nno03016
]
NONO_c59050
Enzymes [BR:
nno01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
NONO_c59050
Transfer RNA biogenesis [BR:
nno03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
NONO_c59050
Prokaryotic type
tRNA splicing ligases
NONO_c59050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
DUF4514
Motif
Other DBs
NCBI-ProteinID:
AHH20682
UniProt:
W5TN40
LinkDB
All DBs
Position
6425066..6426289
Genome browser
AA seq
407 aa
AA seq
DB search
MFPVELRGTKAQTLMWAHEHEVEQAALQQLRTIAELEWVHGVRVMPDVHLGKGATVGSVI
AMKDAVAPAAVGVDIGCGMEAVKTSLTASDLPDDLHSLRSRIEAAVPVGFSAHDKAVDVT
RLQTAIHGQRAAGTTLRAGWTRFWGLFSDLDPAVQKRESKAHKQMGTLGGGNHFIEVCLD
TEQHVWVLLHSGSRNIGKELAERHIAVARKLPQNQDLPDRDLAVFLSGTPEMDAYRRDLN
WAQEYAARNRAVMLSLVCTAVRDEFATLPVRFDEPISCHHNYVAEEVIDGVPMLVTRKGA
VRAGDGDLALIPGSMGTRSYVVRGKGNPASFQSASHGAGRRMSRSAAKRQFTVADLIAQT
DGVESRKDAGVIDEIPAAYKDIDTVISAQRDLVDVVATLRQVLCVKG
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgtttcccgtcgagctgcgcggaaccaaggcgcagacgctcatgtgggcccacgagcac
gaggtcgagcaggccgcgctgcagcagctgcgcaccatcgccgagctggaatgggtccac
ggcgtgcgcgtcatgccggacgtgcacctcggcaagggagccacggtcggatccgtcatc
gccatgaaggacgcggtcgcaccggcggccgtcggagtcgatatcggctgcgggatggaa
gcggtgaagacctcgctcaccgcctcggatctgcccgacgacctgcactcgctgcgctcc
cggatcgaggccgcggtgccggtcgggttctccgcgcacgacaaggcggtggacgtcacc
cggttgcagaccgcgatccacggccagcgcgccgcgggcaccacgctgcgggcgggctgg
acccggttctggggcctgttctcggacctggatccggccgtgcagaagcgagagtccaag
gcgcacaagcagatgggcacgctcggcggtggcaaccacttcatcgaggtctgcctcgac
accgagcagcacgtgtgggtcctgttgcattccggaagccgcaatatcggcaaggaactg
gcggagcggcatatcgcggtggcgcgcaagctgccgcagaaccaggatctgcccgatcgc
gacctggcggtattcctctccggcacaccggaaatggatgcctatcggcgggacctgaac
tgggcgcaggagtacgctgcccgcaaccgggcggtcatgctctcgctggtctgcacggcg
gtccgcgacgaattcgccacgctgccggtgcgtttcgacgagccgatctcgtgccaccac
aactatgtggcggaggaggtcatcgacggtgtgcccatgctggtgacccgtaagggcgcg
gtacgcgccggagacggtgatctcgccctgatccccggatcgatgggcactcgctcgtat
gtggtgcgcggcaagggaaatccggcctcattccagtccgcatcgcacggtgcggggcgt
cggatgagccgtagtgccgccaagcggcagttcaccgtcgccgacctgatcgcacagacc
gacggggtcgaatcgcgcaaggacgccggggtgatcgatgagattcccgcggcctacaag
gacatcgacaccgtgatctccgcccagcgagatctggtcgatgtggtcgccaccctccgc
caggtgctgtgtgtgaagggctag
DBGET
integrated database retrieval system
