Nocardia nova: NONO_c62830
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Entry
NONO_c62830 CDS
T03032
Name
(GenBank) putative Rhs protein
Organism
nno
Nocardia nova
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
DUF6531
TEN_YD-shell
T7SS_signal
WXG100
PPE
EspA_EspE
Motif
Other DBs
NCBI-ProteinID:
AHH21053
UniProt:
W5TQ29
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Position
6761028..6765275
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AA seq
1415 aa
AA seq
DB search
MAAADNPLIAQRESSTEWYTGIGVAESVADVHDAISSGSWVDGGLSVVDAGTEVVSMVVD
PIGTLASYGVGWLMEHVQPLQDALDWIAGDPDAVTAYAKTWENVSTHINQVADQHNKHVT
TDVADWTGSAGDAYRAHATETNTLLTAASNAASTASTAIAMAGGVVSFVRQTVRDLIAQA
VGRLAAWAAEEVCTLGVATPLVAAQAGTFVAKVLSTIAKLFRRLSATFKKLTPLLHKLKG
SWEDIIKALRRGRGGDLPSTSKPHTTTHPTSHKPDTHGKPTHHDDGADTHTTSHDGDPDT
GDHTPEKPRNDPHQRATDDHGTGNHTSESGPENSRTEKQVTGCGDPVDGATGEFLLPETD
LELPGVLPLVLGRRHRSNYRFGRWFGPSWSATLDIRIVVETDTVTYIGDDGIMLAYPHAA
AGVEALPINGQLRWPLVRTETGGYRVTDPDRELHWHFEPEAALDGLDVRLGNYALSAITD
RHRNLIRFHYDTDGSPVEITHSGGYRVRVDTEAGRVTGLAVLGKRRVAQAHSESSGSVGD
APPLGGAARPGTGERPADGNSSTGDRSADHGNETSDRHGPVVAGSLESTGIADENATGPA
SGNVAHRVDSSGSPADGAIRDGSEIGYRPGTIAADAVDDGLDDEIVTPVRTFIYEAGRLV
GVTNGVGATTTYTYDAEHRMTSWTDSNANSLTNTYDEAGRVITQRGTNGILNADFDYFTY
PDGTGTRTTVTDSTGAATHYDFDPDHKLRDVIDPLGGRIHTDYTSDRKPLRVIAPDGGIT
YYTYNADGDLTKIKRPDDKSIIFGYAARNRPTTITDADDSTRHQEWDSTGNVAAVVDEAG
RRTEYTHAPTGAITAITESTGATTSFEVDRAGLPATVTDPYGAPTTIDRDHFGRPVTITD
ALGGITRHEWSPEGKPLKRTDPDGYSESWTWDGEGNLLTHTDRAGNRTFHKYGAFDLLEY
RTDPDGTSTLYNWDTERRLTTVTNPLGDHWTYTYDPAGRLASETDYNGATTTYEHNPNGS
LATVTTPTGVRRHHTHDLLGRLTQIRCDTGEYQLYTHDAVGRLLTAVSGVGNDRTHTLEF
TYDTAGNLVSERVDDRPPMLFEHDEHGRRTSRRSPSGAVTGWGYDPTGRVTSMTIDGHRA
TFAHDTLGRPTGWTLDNLVVEQALSPVGQVLSRQVSARPNLPAPTPPHPNQARSIRRDDY
TWRPDGYLTTQTTHRLGASPQHRAYNLDQIGRITTITDNGHATEHYTYDALSNITSTLPQ
TAIDHHLHPNQAPGAFTPPPHQDLDRRREYRNNLLIRNGRTQYHYDRAGRLIRKQVNRQS
RKPDIWHFRYDAFDQLTDVFTPTKQWWRYTYDAFGRRILKQQTQMMEVSSNKFNILGIQN
ISSSSTPVTPRPFAGGTDQIHIQDWRSKYTAAENL
NT seq
4248 nt
NT seq
+upstream
nt +downstream
nt
atggcagcggccgacaacccgctgatcgcgcaacgggaatcgtcgaccgagtggtacacc
gggatcggggtcgcggaatcggtcgccgatgttcacgacgccatctcctcgggttcctgg
gtcgacggcgggttgtcggtggtcgacgccggtaccgaagtcgtgtccatggtcgtcgac
ccgatcggcaccctcgcctcctacggcgtcggctggctgatggaacacgtccagccgctg
caggacgcactggactggatcgccggcgaccccgacgccgtcaccgcctacgccaaaacc
tgggaaaacgtctccacccacatcaaccaggtcgccgaccagcacaacaagcacgtcacc
accgacgtggcggattggaccggatccgcgggcgacgcctatcgcgcccacgccaccgaa
accaacaccctgctcaccgcggcctccaacgccgcctcgaccgcatccaccgcgatcgcg
atggcgggcggagtcgtgtcgttcgtccgccagacggtgcgggatctgatcgcgcaagct
gtcggccggctggcggcgtgggctgcggaggaagtgtgcactctcggtgtcgcgacccca
ctcgtggccgcgcaggccggcacattcgtcgcgaaagtgttgtccacgatcgcgaaactg
ttccgcagactgtcggccaccttcaagaagctcactcccctgctccacaagttgaagggg
tcgtgggaagacatcatcaaggcgctcaggcgcggccgcggcggcgatctcccgtccacc
agcaagccccacaccacaacccatccgacctcacacaaacccgatacccacggcaaaccg
acccaccacgacgacggcgccgacacccacaccacctcccacgacggcgatcccgacacc
ggcgaccacacgccggaaaaaccacgcaacgatccacaccaacgcgccaccgacgaccac
ggcaccggcaaccacacctccgagtcgggtcccgaaaactcccgcaccgagaaacaggtc
accggatgcggcgatccggtcgacggcgccaccggcgaattcctgcttccggaaaccgat
ctcgaactccccggcgtgctgccgctcgtcctgggacgacgacaccgctccaactaccgc
ttcggccgttggttcggcccctcctggtcggccaccctcgacatccgcatcgtcgtcgag
accgacaccgtcacatacatcggcgacgacggcatcatgctcgcctatccccacgccgcg
gccggtgtcgaggcactgccgatcaacggccaattgcgctggcctctggtccgcaccgaa
accggtggctaccgcgtcaccgatcccgatcgcgaactgcactggcacttcgaacccgag
gccgcactcgacggcctcgacgtgcgcctgggcaactacgcgctcagcgccatcaccgac
cggcatcgcaacctgatccgattccactacgacaccgacgggtcaccggtcgagatcacg
cattcgggtggatatcgggtgcgcgtcgataccgaagcgggccgcgtcaccggattggcc
gtactgggcaaacgcagagtcgcacaagcacactccgaatccagcggatcggttggcgat
gctccaccgctgggcggtgcagctcgacccggcaccggcgagcgccctgccgacgggaat
tcgagcactggcgaccgttcagcggaccacgggaacgaaacctccgacaggcacggccct
gtcgtcgcaggttcactggaatcgactggaatcgccgacgagaatgccaccggtcccgct
tctgggaatgtcgcgcatcgtgtcgacagcagcggttccccggccgacggcgcgatccgt
gacggcagcgagatcggatatcggcccggcacaatcgcagcagacgcagtcgacgatggc
ctggacgacgagatagtcacgccggtacgaactttcatctacgaagcaggccggctggtc
ggcgtgaccaacggcgtaggcgctaccaccacctacacctacgacgccgaacaccgcatg
acgtcgtggaccgactccaacgcgaactccctcaccaacacctacgacgaagcaggccgc
gtcatcacccaacgtggcaccaacggcatcctcaacgccgacttcgactacttcacctac
cccgacggcaccggaacccgcaccaccgtcaccgactccaccggcgccgccacccactac
gacttcgaccccgaccacaaactccgagacgtcatcgacccgctcggcggtcgcatccac
accgactacacatccgaccgcaaaccgttgcgcgtcatcgcccccgacggcggcatcacc
tactacacctacaacgccgacggcgatctcacgaaaatcaaacgcccggacgacaagtcg
atcatcttcggctacgcggcccgcaatcggccgaccacgatcaccgacgccgacgactcg
acccgccaccaggagtgggactcgacaggcaacgtcgccgcggtagtggacgaggccgga
cgccgcacggaatacacccacgccccgaccggcgccatcaccgcgatcaccgaatcaacc
ggggcgacaacctcattcgaggtggaccgagccggactccccgcaacggtcaccgacccc
tacggcgcacccaccaccatcgaccgcgaccatttcggccgccccgtcaccatcaccgac
gccctcggcggcatcacccgccacgaatggtcccccgagggaaaacccctcaaacgcacc
gaccccgacggctattcggaatcctggacctgggacggcgaaggcaacctcctcacccac
accgaccgagcaggcaaccgcaccttccacaaatacggcgccttcgacctcctcgaatac
cgcacagaccccgacggcaccagcaccctctacaactgggacaccgaacgccgcctcacc
acagtcaccaaccccctcggcgaccactggacctacacctacgacccagccggacgcctg
gcctccgaaaccgactacaacggcgccaccaccacctacgaacacaaccccaacggatcc
ctcgccaccgtcaccacccccaccggagtccgccgccaccacacccacgacctcctcggc
cgcctcacccaaatccgctgcgatacaggcgaataccagctctacacgcacgatgccgtc
gggcggttgttgaccgcggtatccggtgtcggaaacgaccgcacccacaccctcgaattc
acctacgacacagccggaaacctggtttccgagcgcgtcgacgaccgcccaccgatgctg
ttcgaacacgacgaacacggacggcgcacatcccgccgcagcccgagcggggcggtgacc
ggttggggttacgaccccaccggccgcgtgacttccatgaccatcgacggtcaccgggcg
acgttcgcacacgacacactaggccgcccgaccggatggactcttgacaatctggtggtc
gagcaagcactttcgcctgtcggccaggtcctcagccgacaagtctcagcgcgcccgaac
ctgcccgccccaactcctccgcaccccaaccaggcccgctcgatccgccgcgacgactac
acctggcgcccagacggctacctcaccacccaaaccacccaccgcctcggcgcatccccc
caacaccgcgcatacaacctggaccagatcggccgaatcaccaccatcaccgacaatggc
cacgcaaccgagcactacacctacgacgccctctccaacatcaccagcacccttcctcag
acggccattgatcaccaccttcacccgaaccaggcgcccggcgcatttacacccccgccc
caccaagacctcgaccgcagacgtgagtaccgcaataatctcctcattcgcaatggtcga
acgcaataccactacgaccgagccggtcggctgattcgaaaacaagtcaaccgacagtcc
aggaaaccagacatctggcatttcagatatgacgctttcgatcagttgaccgatgtattc
acaccaaccaaacagtggtggcgctatacgtatgacgcctttggtagacggatcttaaaa
cagcagacacaaatgatggaagtatcctcgaacaagttcaatatacttgggattcaaaac
atctcatcgagcagcactccagttacgccgagaccgttcgctggtggtaccgaccagatt
cacatacaggattggcgcagcaagtacacagcggccgagaacctgtaa
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