Nocardia nova: NONO_c68040
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Entry
NONO_c68040 CDS
T03032
Symbol
pcrA
Name
(GenBank) ATP-dependent DNA helicase PpcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
nno
Nocardia nova
Pathway
nno03420
Nucleotide excision repair
nno03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
nno00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NONO_c68040 (pcrA)
03430 Mismatch repair
NONO_c68040 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nno03400
]
NONO_c68040 (pcrA)
Enzymes [BR:
nno01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NONO_c68040 (pcrA)
DNA repair and recombination proteins [BR:
nno03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NONO_c68040 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
NONO_c68040 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
DEAD
Motif
Other DBs
NCBI-ProteinID:
AHH21571
UniProt:
W5TWL3
LinkDB
All DBs
Position
complement(7317326..7319866)
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AA seq
846 aa
AA seq
DB search
METTVATQRNKAAAVTGSGARSAPDGDDRVQRLLAGLNPQQRAAVVHAGSPLLIVAGAGS
GKTAVLTRRIAYLLAERDVTPGQILAITFTNKAAAEMRERVIDLVGPRAASMWVSTFHSS
CVRILRMQSNLLPGSLNSNFSIYDADDSRRLLAMIIRDQNLDPKKYSPRLLSTAISNLKN
ELIDPDTATADAESDESDLPGIVARVYTEYQRRLRAANAFDFDDLIGETVALLQRHPQVA
EYYRRRFRHVLVDEYQDTNHAQYVLIRELVGHHVRPAGELDDADAGAEAADPDFVPQRGA
ETVPPSELCVVGDADQSIYAFRGATIRNIEEFERDFPDAETILLEQNYRSTQHILSAANA
VISRNENRRDKKLWTDSGEGDLIVGYVADNEHDEASFVAREIDRLVDQGDYNYADVAVFY
RTNNNSRALEEIFIRMGLPYKVVGGVRFYERKEVRDVVAYLRVLENPDDAVSLRRILNTP
RRGIGDRAEACVAVHAEQRGIGFAAALRDAADGKVALLNTRAQRAIAGFLDLLDEIRAAG
ATPDSEYPDVGNVVDAVLDKTGYRIELETSDDPQDGARLDNLNELVSVAREFSSEARNNI
EAAREEGLVPEAVDGEPDPGSLAAFLERVSLVADTDQIPDEGSGVVTLMTLHTAKGLEFP
VVFVTGWEDGQFPHMRALGDPAELAEERRLAYVGITRARKRLYLSRAVVRSGWGQAVSNP
ESRFLQEIPGHLLDWQRLEPAPPSSGRGFRKRGDDDGVERDWTRGDGWSQQRPGLRDRGA
PARPGAKLNNSGLVLAVGDRVSDDKYGLGRVVAAEGFGSLATVTIDFGTAGKIRLIPQYS
RTLVKL
NT seq
2541 nt
NT seq
+upstream
nt +downstream
nt
atggagacgacggtggcaacccagcggaacaaggcggcagcagtcacgggttcgggggcg
cgatccgctccggacggtgacgaccgggtgcagcggctgctcgcgggcctcaatccccag
cagcgcgccgcggtcgtgcacgccggttcgccgctgctgatcgtcgccggggccgggtcc
ggtaagaccgccgtgctcacccgccgcatcgcctatctgctggccgagcgggatgtcacc
cccgggcagatcctggccatcaccttcaccaacaaggccgcggccgagatgcgggagcgg
gtgatcgatctggtcggcccgcgcgcggcctccatgtgggtctcgaccttccactcctcc
tgtgtgcgcattctgcggatgcagtccaatctgcttcccggctcgctgaattcgaatttc
tccatctacgacgccgacgattcccggcggctgctggcgatgatcatccgcgatcagaat
ctggatccgaagaagtactcgccgcgcctgttgtcgaccgccatctccaatctcaagaac
gaactcatcgatcccgacaccgccacggcggacgcggaatccgacgagtccgatctgccc
ggcatcgtggcccgtgtctacaccgaataccagcggcgcctgcgcgcggccaatgccttc
gatttcgatgatctgatcggtgagacggtggcgctgttgcagcgccatccgcaggtcgcc
gagtactaccgccgccggttccggcacgtcctggtcgacgagtaccaggacaccaaccat
gcccagtacgtgctgatccgcgagctggtcggccatcacgtccggcccgcgggtgaactc
gacgacgccgatgccggggcggaagcggccgatccggatttcgtgccgcagcgcggcgcc
gagaccgtgccgcccagtgaactgtgtgtggtcggcgacgccgatcaatcgatctacgca
ttccgtggcgctaccatccgcaatatcgaggaattcgaacgcgatttcccggatgcggaa
acgattctgctggaacagaattaccgatcgacccagcacatcctgtcggccgcgaacgcg
gtcatctcccgcaacgagaatcgccgcgacaagaaactgtggaccgattccggcgaaggc
gatctgatcgtcggttacgtcgccgacaacgagcacgacgaggcatccttcgtcgcccgg
gaaatcgatcgcctggtcgatcagggcgattacaactacgccgatgtcgcggtgttctac
cgcaccaacaacaattcccgcgcgctggaggagatcttcatccgcatgggcctgccctac
aaggtggtcggcggggtgcgcttctacgagcgcaaagaggtccgcgatgtggtggcctac
ctgcgggtgctggagaatcccgacgacgcggtgagcctgcgccgaatcctcaacaccccg
cgtcgaggcatcggtgaccgcgccgaggcgtgtgtggccgtccacgccgaacagcgcggt
atcggtttcgccgccgcgctgcgggacgcggccgacggcaaggtggcgctgctgaacacc
cgcgcgcagcgggccatcgcgggcttcctggacctgctcgacgagatccgggccgccggg
gccacgccggattcggagtatccggatgtgggcaatgtcgtggacgcggtgctcgacaag
accggctaccgcatcgaactggagacctccgacgatccccaggacggcgcccggctggac
aatctgaacgaattggtcagcgtggcacgggaattcagctccgaggcgcgcaacaatatc
gaggccgcccgggaagaggggctggtgccggaggccgtcgacggcgagcccgatcccggt
tcgctggcggccttcctggagcgggtgtcactggtcgccgataccgatcagattcccgac
gagggttccggtgtggtcaccctgatgaccctgcacaccgccaagggcctggaattcccg
gtcgtgttcgtcaccggctgggaggacgggcagttcccgcacatgcgtgccctgggcgat
cccgcggagctggccgaggaacgccgcctcgcctacgtcggcatcacccgcgcccgcaaa
cgcctgtatctgagccgcgcggtggtgcgctcgggctggggtcaggccgtgtcgaatccg
gaatcccgcttcctgcaggagattccggggcatctgctggattggcagcggctggaaccg
gcaccgccgtcgagtgggcgcggcttccgcaagcgcggcgacgacgatggtgtggaacgg
gattggacccgcggcgacggctggtcccagcagcgccccggcctgcgcgatcgcggcgcc
cccgcccgtcccggcgccaaactcaacaactccggtctggtgctggccgtgggcgaccgg
gtcagcgacgacaaatacggtctgggccgggtggtggcggccgagggcttcggctcgctg
gccacggtcaccatcgatttcggcaccgccgggaagatccgcctgattccccagtacagc
cggaccctggtgaagctctga
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